TCONS_00045658-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00045658-protein
Unique NameTCONS_00045658-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length205

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00045658-protein ID=TCONS_00045658-protein|Name=TCONS_00045658-protein|organism=Clytia hemisphaerica|type=polypeptide|length=205bp
YFRVDLKNNEIKIQIMEEKVNKTELYHEKQRLQYCAVHAINNLFQNADAC
SKATLDEICYNLNPSRWLNPHRSMLGLGNYDINVITMFLQSREHEVVWFD
KRRPAEDIKLEEVFGFLLNDISKQSLFGKTFSLSSSFKHWYIIREFNNDC
YFNLDSKLQKPLEIGDDKLLIEYLNTRLIQKECQLLLVVKTGRSGEDVYI
NKDAG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_029193XLOC_029193Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00045658TCONS_00045658Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006155Josephin
Vocabulary: Molecular Function
TermDefinition
GO:0004843thiol-dependent ubiquitin-specific protease activity
Vocabulary: Biological Process
TermDefinition
GO:0016579protein deubiquitination
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016579 protein deubiquitination
molecular_function GO:0004843 thiol-dependent ubiquitin-specific protease activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006155Josephin domainSMARTSM01246Josephin_2coord: 29..191
e-value: 2.6E-65
score: 233.0
IPR006155Josephin domainPFAMPF02099Josephincoord: 30..176
e-value: 1.2E-19
score: 70.8
IPR006155Josephin domainPROSITEPS50957JOSEPHINcoord: 22..203
score: 43.16

Blast
[Close]
BLAST of TCONS_00045658-protein vs. Swiss-Prot (Human)
Match: JOS2 (Josephin-2 OS=Homo sapiens GN=JOSD2 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 5.249e-45
Identity = 76/176 (43.18%), Postives = 103/176 (58.52%), Query Frame = 0 
Query:   14 QIMEEKVNKTELYHEKQRLQYCAVHAINNLFQNADACSKATLDEICYNLNPSRWLNPHRSMLGLGNYDINVITMFLQSREHEVVWFDKRRPAEDIKLEEVFGFLLNDISKQSLFGKTFSLSSSFKHWYIIREFNNDCYFNLDSKLQKPLEIGDDKLLIEYLNTRLIQKECQLLLVV 189
            Q    + +   +YHE+QRL+ CAVHA+NN+ Q     S+   DEIC  L P   LNPHRS+LG GNYD+NVI   LQ      VW+D+RRP   + L +V G +LN  S  SL     SL    +HW  +R+ +   Y+NLDSKL+ P  +GD+  +  +L   L Q  C++LLVV
Sbjct:    3 QAPGAQPSPPTVYHERQRLELCAVHALNNVLQQ-QLFSQEAADEICKRLAPDSRLNPHRSLLGTGNYDVNVIMAALQGLGLAAVWWDRRRPLSQLALPQVLGLILNLPSPVSL--GLLSLPLRRRHWVALRQVDG-VYYNLDSKLRAPEALGDEDGVRAFLAAALAQGLCEVLLVV 174
The following BLAST results are available for this feature:
BLAST of TCONS_00045658-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
JOS25.249e-4543.18Josephin-2 OS=Homo sapiens GN=JOSD2 PE=1 SV=1[more]
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