TCONS_00044345-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00044345-protein
Unique NameTCONS_00044345-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length109

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00044345-protein ID=TCONS_00044345-protein|Name=TCONS_00044345-protein|organism=Clytia hemisphaerica|type=polypeptide|length=109bp
NTDCPYVEITCRFTGCDVCFLRKAKQQHEQNCPMKEVNCVYCQMAFKESD
EQNHYRQCLKYPTKCPNQGCEKVFPKNAVSGHQNTECLFQTIKCEFENFG
CNVQVLRKD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_027978XLOC_027978Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00044345TCONS_00044345Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001293Znf_TRAF
IPR008974TRAF-like
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 56..109
e-value: 2.7E-10
score: 39.8
coord: 1..55
e-value: 1.3E-5
score: 24.8
IPR001293Zinc finger, TRAF-typePFAMPF02176zf-TRAFcoord: 54..107
e-value: 6.5E-11
score: 42.7
IPR001293Zinc finger, TRAF-typePROSITEPS50145ZF_TRAFcoord: 54..105
score: 11.126
IPR001293Zinc finger, TRAF-typePROSITEPS50145ZF_TRAFcoord: 3..42
score: 8.803
IPR008974TRAF-likeSUPERFAMILY49599TRAF domain-likecoord: 63..109
IPR008974TRAF-likeSUPERFAMILY49599TRAF domain-likecoord: 8..58

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00044345-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top