TCONS_00024208-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00024208-protein
Unique NameTCONS_00024208-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length356

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00024208-protein ID=TCONS_00024208-protein|Name=TCONS_00024208-protein|organism=Clytia hemisphaerica|type=polypeptide|length=356bp
MWLSHIVLSLTLFAADCFCTQLQAFKGNAIHPFIPAQTSAQTVSQLQCIL
KHRLDHSKYWLIEAKQIKSDQWLCRYFILINYDDVQKLFTEDVTSTVYAR
VSVRELKQNIHEATPPAESTSETQPPSTPASSCKVLKDNDDKKSSENGRG
GNIQSGVYQIKIGEQTKPVYCDMMNNEGGWTLIQRRVDKKDFYRGWDDYK
NGFGYPSGSYWLGLEVIHQMTKKGNTLIRLEGYRKDNQEHLYAIHERFKV
ENETCQYRVHVGGYLSGSSDSLSEDVALMNSAAFSTLDNDNDAWFESCAQ
KWHAGWWFNSCCHINANGVFLNQGDEWQRNGILWGDALMLSFSIALKEVE
APTLIP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_013581XLOC_013581Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00024208TCONS_00024208Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002181Fibrinogen_a/b/g_C_dom
IPR014716Fibrinogen_a/b/g_C_1
IPR014715Fibrinogen_a/b/g_C_2
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSMARTSM00186FBG_2coord: 134..349
e-value: 4.9E-37
score: 139.0
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPFAMPF00147Fibrinogen_Ccoord: 143..345
e-value: 3.6E-47
score: 160.9
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPROSITEPS51406FIBRINOGEN_C_2coord: 124..356
score: 37.726
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainCDDcd00087FReDcoord: 145..344
e-value: 3.22347E-63
score: 201.7
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 147..335
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 84..280
e-value: 1.9E-46
score: 158.0
IPR014715Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 2GENE3D4.10.530.10coord: 281..344
e-value: 1.5E-16
score: 59.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 112..152

Blast
[Close]
BLAST of TCONS_00024208-protein vs. Swiss-Prot (Human)
Match: ANGP4 (Angiopoietin-4 OS=Homo sapiens GN=ANGPT4 PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 7.115e-40
Identity = 83/194 (42.78%), Postives = 118/194 (60.82%), Query Frame = 0 
Query:  145 SENGRGGNIQSGVYQIKIGEQTKP--VYCDMMNNEGGWTLIQRRVDKK-DFYRGWDDYKNGFGYPSGSYWLGLEVIHQMTKKGNTLIRLEGYRKDNQEHLYAIHERFKVENETCQYRVHVGGYLSGSSDSLSEDVALMNSAAFSTLDNDNDAWFESCAQKWHAGWWFNSCCHINANGVFLNQGD-EWQRNGILW 334
            +E  R G   SGVY I++   TKP  V+CD+ ++ G WTLIQRR +   +F R W DYK GFG P+G +WLG EV+HQ+T++    +R+E    +  E  YA +E F + +E   YR+ V GY SGS+   S  V  + + +FSTLD+DND     CAQ    GWWF++C   N NGV+ +  D +++ +GI W
Sbjct:  292 AEIQRSGASASGVYTIQVSNATKPRKVFCDLQSSGGRWTLIQRRENGTVNFQRNWKDYKQGFGDPAGEHWLGNEVVHQLTRRAAYSLRVELQDWEGHE-AYAQYEHFHLGSENQLYRLSVVGY-SGSAGRQSSLV--LQNTSFSTLDSDNDHCLCKCAQVMSGGWWFDACGLSNLNGVYYHAPDNKYKMDGIRW 481
The following BLAST results are available for this feature:
BLAST of TCONS_00024208-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ANGP47.115e-4042.78Angiopoietin-4 OS=Homo sapiens GN=ANGPT4 PE=1 SV=1[more]
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