TCONS_00022013-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00022013-protein
Unique NameTCONS_00022013-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length337

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00022013-protein ID=TCONS_00022013-protein|Name=TCONS_00022013-protein|organism=Clytia hemisphaerica|type=polypeptide|length=337bp
KEKHWYMQNLKKKQKVSSLSKSNHIEATNAKMNNECMSLDQNVKKPKNSQ
KHKQVHLIDNLVVDEKDLDSLSNIEQSCSIGQLTENATNTFKNASKAAAN
KKAFQCGICGKRFQFVNNFVXTNKKAFQCSICGKRFQFVNNFVAHNRHHT
NDKSNNEFNNGGLFNAHVNSSGYDKPYGCTVSGKGLTNEKSISSSSADYL
FDKSFTASSNTNLQNDSHLDNNKKLFECDVCEKSFAQMYHLKRHQRIHTG
EKPFKCTVCGKASNRSHHLQGHLRMHTGEKPYDCNVCGKAFSDLGNLQKH
LRIHTGEKPFKCTLCEKAFTQSSHLDSHLRIHHAVTL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012360XLOC_012360Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00022013TCONS_00022013Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 310..332
e-value: 0.0021
score: 27.3
coord: 254..276
e-value: 0.0087
score: 25.3
coord: 127..149
e-value: 0.15
score: 21.1
coord: 282..304
e-value: 9.1E-5
score: 31.8
coord: 226..248
e-value: 0.0013
score: 28.0
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 284..304
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 228..248
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 129..149
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 226..253
score: 17.267
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 310..332
score: 12.674
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 254..281
score: 15.521
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 127..154
score: 12.902
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 282..309
score: 17.579
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 276..328
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 234..291
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 101..153
NoneNo IPR availableGENE3D2.20.28.10coord: 184..231
e-value: 1.0E-6
score: 27.9
NoneNo IPR availableGENE3D3.30.160.60coord: 249..267
e-value: 2.9E-17
score: 62.0
NoneNo IPR availableGENE3D3.30.160.60coord: 138..183
e-value: 2.4E-7
score: 30.3
coord: 116..137
e-value: 3.6E-8
score: 32.9
NoneNo IPR availableGENE3D3.30.160.60coord: 301..335
e-value: 4.4E-20
score: 70.9
NoneNo IPR availableGENE3D3.30.160.60coord: 288..300
e-value: 2.6E-16
score: 58.9
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 226..248
e-value: 1.9E-5
score: 24.8
coord: 254..276
e-value: 0.001
score: 19.3
NoneNo IPR availableGENE3D3.30.160.60coord: 232..248
e-value: 2.9E-15
score: 55.6
NoneNo IPR availablePFAMPF13912zf-C2H2_6coord: 126..149
e-value: 0.076
score: 12.9
NoneNo IPR availableGENE3D3.30.160.60coord: 268..287
e-value: 1.7E-20
score: 72.6
NoneNo IPR availablePFAMPF13465zf-H2C2_2coord: 296..320
e-value: 2.9E-10
score: 40.0
NoneNo IPR availableGENE3D3.30.160.60coord: 107..115
e-value: 0.11
score: 12.3
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 9..106
e-value: 4.4E-4
score: 20.0

Blast
BLAST of TCONS_00022013-protein vs. Swiss-Prot (Human)
Match: ZN568 (Zinc finger protein 568 OS=Homo sapiens GN=ZNF568 PE=2 SV=2)

HSP 1 Score: 182.185 bits (461), Expect = 3.088e-52
Identity = 99/252 (39.29%), Postives = 139/252 (55.16%), Query Frame = 0
Query:   99 ANKKAFQCGICGKRFQFVNNFVX-----TNKKAFQCSICGKRFQFVNNFVAHNRHHTNDKS------NNEFNNGGLFNAHVNSSGYDKPYGCTVSGKGLTNEKSISSSSADYLFDKSFTA-------SSNTNLQNDSHLDNNKKLFECDVCEKSFAQMYHLKRHQRIHTGEKPFKCTVCGKASNRSHHLQGHLRMHTGEKPYDCNVCGKAFSDLGNLQKHLRIHTGEKPFKCTLCEKAFTQSSHLDSHLRIH 332
              +K ++C  CGK F    N +      T +K + C+ CG+ F  +++   H R HT +K          F+   +F  H+ S   +KPY C+  GK  +   S++    ++  +K +         S   NL     +   +K +EC  C K+F QM +L RHQRIHTGEKP+ CTVCGKA ++  +L  H ++HTGEKPY CN CGKAFS   NL +H +IHTGEKPFKC  C KAF++ S L  H+R H
Sbjct:  329 TGEKPYECKECGKSFSQKQNLIEHEKIHTGEKPYACNECGRAFSRMSSVTLHMRSHTGEKPYKCNKCGKAFSQCSVFIIHMRSHTGEKPYVCSECGKAFSQSSSLTVHMRNHTAEKPYECKECGKAFSRKENLITHQKIHTGEKPYECSECGKAFIQMSNLIRHQRIHTGEKPYACTVCGKAFSQKSNLTEHEKIHTGEKPYHCNQCGKAFSQRQNLLEHEKIHTGEKPFKCNECGKAFSRISSLTLHVRSH 580          

HSP 2 Score: 161.384 bits (407), Expect = 1.179e-44
Identity = 98/257 (38.13%), Postives = 135/257 (52.53%), Query Frame = 0
Query:   96 KAAANKKAFQCGICGKRFQFVNNFVX-----TNKKAFQCSICGKRFQFVNNFVAHNRHHTNDKSNNEFNNGGLFN------AHVNSSGYDKPYGCTVSGKG------LTNEKSISSSSADY---LFDKSFTASSNTNLQNDSHLDNNKKLFECDVCEKSFAQMYHLKRHQRIHTGEKPFKCTVCGKASNRSHHLQGHLRMHTGEKPYDCNVCGKAFSDLGNLQKHLRIHTGEKPFKCTLCEKAFTQSSHLDSHLRIH 332
            ++   +K ++C  CGK F   + F+      T +K + CS CGK F   ++   H R+HT +K       G  F+       H      +KPY C+  GK       L   + I +    Y   +  K+F  S  +NL     +   +K + C+ C K+F+Q  +L  H++IHTGEKPFKC  CGKA +R   L  H+R HTGEKPY+CN CGKAFS    L  H+R HTGEKPF+C  C KAF+Q + L  H R H
Sbjct:  382 RSHTGEKPYKCNKCGKAFSQCSVFIIHMRSHTGEKPYVCSECGKAFSQSSSLTVHMRNHTAEKPYECKECGKAFSRKENLITHQKIHTGEKPYECSECGKAFIQMSNLIRHQRIHTGEKPYACTVCGKAF--SQKSNLTEHEKIHTGEKPYHCNQCGKAFSQRQNLLEHEKIHTGEKPFKCNECGKAFSRISSLTLHVRSHTGEKPYECNKCGKAFSQCSLLIIHMRSHTGEKPFECNECGKAFSQRASLSIHKRGH 636          

HSP 3 Score: 151.754 bits (382), Expect = 3.635e-41
Identity = 88/241 (36.51%), Postives = 119/241 (49.38%), Query Frame = 0
Query:   99 ANKKAFQCGICGKRFQFVNNFVX-----TNKKAFQCSICGKRFQFVNNFVAHNRHHTNDKSNNEFNNGGLFNAHVNSSGYDKPYGCTVSGKGLTNEKSISSSSADYLFDKSFTASSNTNLQNDSHLDNNKKLFECDVCEKSFAQMYHLKRHQRIHTGEKPFKCTVCGKASNRSHHLQGHLRMHTGEKPYDCNVCGKAFSDLGNLQKHLRIHTGEKPFKCTLCEKAFTQSSHLDSHLRIHHA 334
            A +K ++C  CGK F    N +      T +K ++C+ CGK F  ++N + H+R HT +K                      PY C    K                       S  +NL     +   +K +EC  C KSF+Q  +L  H++IHTGEKP+ C  CG+A +R   +  H+R HTGEKPY CN CGKAFS       H+R HTGEKP+ C+ C KAF+QSS L  H+R H A
Sbjct:  245 AGEKPYECKECGKAFSRKENLITHQKIHTGEKPYKCNECGKAFIQMSNLIRHHRIHTGEK----------------------PYACKDCWKAF---------------------SQKSNLIEHERIHTGEKPYECKECGKSFSQKQNLIEHEKIHTGEKPYACNECGRAFSRMSSVTLHMRSHTGEKPYKCNKCGKAFSQCSVFIIHMRSHTGEKPYVCSECGKAFSQSSSLTVHMRNHTA 442          

HSP 4 Score: 132.88 bits (333), Expect = 1.660e-34
Identity = 76/220 (34.55%), Postives = 112/220 (50.91%), Query Frame = 0
Query:  101 KKAFQCGICGKRFQFVNNFVX-----TNKKAFQCSICGKRFQFVNNFVAHNRHHTNDKSNNEFNNGGLFNAHVNSSGYDKPYGCTVSGKGLTNEKSISSSSADYLFDKSF-------TASSNTNLQNDSHLDNNKKLFECDVCEKSFAQMYHLKRHQRIHTGEKPFKCTVCGKASNRSHHLQGHLRMHTGEKPYDCNVCGKAFSDLGNLQKHLRIHTGEK 308
            +K ++C  CGK F    N +      T +K ++CS CGK F  ++N + H R HT +K                      PY CTV GK  + + +++     +  +K +         S   NL     +   +K F+C+ C K+F+++  L  H R HTGEKP++C  CGKA ++   L  H+R HTGEKP++CN CGKAFS   +L  H R HTGE+
Sbjct:  443 EKPYECKECGKAFSRKENLITHQKIHTGEKPYECSECGKAFIQMSNLIRHQRIHTGEK----------------------PYACTVCGKAFSQKSNLTEHEKIHTGEKPYHCNQCGKAFSQRQNLLEHEKIHTGEKPFKCNECGKAFSRISSLTLHVRSHTGEKPYECNKCGKAFSQCSLLIIHMRSHTGEKPFECNECGKAFSQRASLSIHKRGHTGER 640          

HSP 5 Score: 130.568 bits (327), Expect = 1.236e-33
Identity = 80/270 (29.63%), Postives = 129/270 (47.78%), Query Frame = 0
Query:   94 ASKAAANKKAFQCGICGKRFQFVNNFVXTNKKAFQCSICGKRFQFVNNFVAHNRHHTNDKSNNEFNNGGLFNA-------HVNSSGYD-----------------KPYGCTVSGKGLTNEKSISSSSADYLFDKSFTASS-------NTNLQNDSHLDNNKKLFECDVCEKSFAQMYHLKRHQRIHTGEKPFKCTVCGKASNRSHHLQGHLRMHTGEKPYDCNVCGKAFSDLGNLQKHLRIHTGEKPFKCTLCEKAFTQSSHLDSHLRIH 332
            + K    +K  +C    K F   ++ V + +  + C    K  +   + + + +    +K +NEF       A         N  G D                 KPY C   GK  + ++++ +    +  +K +  +         +NL     +   +K + C  C K+F+Q  +L  H+RIHTGEKP++C  CGK+ ++  +L  H ++HTGEKPY CN CG+AFS + ++  H+R HTGEKP+KC  C KAF+Q S    H+R H
Sbjct:  143 SKKILIKEKVIECKKVAKIFPLSSDIVTSRQSFYDCDSLDKGLEHNLDLLRYEKGCVREKQSNEFGKPFYHCASYVVTPFKCNQCGQDFSHKFDLIRHERIHAGEKPYECKECGKAFSRKENLITHQKIHTGEKPYKCNECGKAFIQMSNLIRHHRIHTGEKPYACKDCWKAFSQKSNLIEHERIHTGEKPYECKECGKSFSQKQNLIEHEKIHTGEKPYACNECGRAFSRMSSVTLHMRSHTGEKPYKCNKCGKAFSQCSVFIIHMRSH 412          

HSP 6 Score: 92.8189 bits (229), Expect = 1.029e-20
Identity = 61/171 (35.67%), Postives = 81/171 (47.37%), Query Frame = 0
Query:  180 TVSGKGLTNEKSISSSSADYLFDKSFTASSNTNLQNDSHLDNNKKLFECDVCEKSFAQMYHLKRHQRIHTGEK------------------PFKCTVCGKASNRSHHLQGHLRMHTGEKPYDCNVCGKAFSDLGNLQKHLRIHTGEKPFKCTLCEKAFTQSSHLDSHLRIH 332
            ++S K L  EK I       +F           L +D  + + +  ++CD  +K       L R+++    EK                  PFKC  CG+  +    L  H R+H GEKPY+C  CGKAFS   NL  H +IHTGEKP+KC  C KAF Q S+L  H RIH
Sbjct:  141 SISKKILIKEKVIECKKVAKIFP----------LSSDI-VTSRQSFYDCDSLDKGLEHNLDLLRYEKGCVREKQSNEFGKPFYHCASYVVTPFKCNQCGQDFSHKFDLIRHERIHAGEKPYECKECGKAFSRKENLITHQKIHTGEKPYKCNECGKAFIQMSNLIRHHRIH 300          
The following BLAST results are available for this feature:
BLAST of TCONS_00022013-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZN5683.088e-5239.29Zinc finger protein 568 OS=Homo sapiens GN=ZNF568 ... [more]
back to top