Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00021872-protein ID=TCONS_00021872-protein|Name=TCONS_00021872-protein|organism=Clytia hemisphaerica|type=polypeptide|length=777bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00021872-protein vs. Swiss-Prot (Human)
Match: LRP1 (Prolow-density lipoprotein receptor-related protein 1 OS=Homo sapiens GN=LRP1 PE=1 SV=2) HSP 1 Score: 131.339 bits (329), Expect = 5.054e-31 Identity = 82/222 (36.94%), Postives = 112/222 (50.45%), Query Frame = 0 Query: 139 EFRCGNGSCIPNLWVCDGKQQCSDGGDENVCNGNCSADQFHCRSGYCLPKQFRCDQDNDCFHGDDEMHCDN--TTCNIFQFRCNDGSCIHLSQKCDGRVDCSTGEDE--KSCPTTTTSPATTTTPRTTTTTTARPVCNGFKCRYGGKCLSNDLICDGTRDCGGWGEDEEC---------CNTKTQYRCSHRPGAHVGKCIQASRRCDGYNDCGDSSDEFNCT 347 EF C NG CI W CDG C+DG DE C C DQF C+SG+C+P ++RCD D DC G DE C TC + +F+CN+ C L+ KCDG DC DE + C P RP F+C+ CL CDGT +CG ++E+C C K ++ C ++ +C+ +S RC+ ++DCGD SDE +C+ Sbjct: 3579 EFSCANGRCIAGRWKCDGDHDCADGSDEKDCTPRCDMDQFQCKSGHCIPLRWRCDADADCMDGSDEEACGTGVRTCPLDEFQCNNTLCKPLAWKCDGEDDCGDNSDENPEECARFVCPP-------------NRP----FRCKNDRVCLWIGRQCDGTDNCGDGTDEEDCEPPTAHTTHCKDKKEFLCRNQ------RCLSSSLRCNMFDDCGDGSDEEDCS 3777 HSP 2 Score: 115.161 bits (287), Expect = 6.376e-26 Identity = 80/217 (36.87%), Postives = 102/217 (47.00%), Query Frame = 0 Query: 139 EFRCGNGSCIPNLWVCDGKQQCSDGGDENVCNGNCSADQFHCRSGYCLPKQFRCDQDNDCFHGDDEMHCDNTT--------CNIFQFRCN-DGSCIHLSQKCDGRVDCSTGEDEKSCPTTTTSPATTTTPRTTTTTTARPVCN---GFKCRYGGKCLSNDLICDGTRDCGGWGEDEECCNTKTQYRCSHRPGAHVGKCIQASRRCDGYNDCGDSSDE 343 +F C NG CI W CD C D DE C+ +CS+ QF C SG C+P+ + CD DNDC DE H + T C+ +F+C DG CI L +CDG DC DEKSC T VC+ F C+ +C+S +CDG DC DEE C + SH + C+ + CDG +DCGD SDE Sbjct: 981 QFTCNNGRCININWRCDNDNDCGDNSDEAGCSHSCSSTQFKCNSGRCIPEHWTCDGDNDCGDYSDETHANCTNQATRPPGGCHTDEFQCRLDGLCIPLRWRCDGDTDCMDSSDEKSCEGVTH------------------VCDPSVKFGCKDSARCISKAWVCDGDNDCED-NSDEENCESLACRPPSHPCANNTSVCLPPDKLCDGNDDCGDGSDE 1178 HSP 3 Score: 108.997 bits (271), Expect = 4.552e-24 Identity = 82/240 (34.17%), Postives = 109/240 (45.42%), Query Frame = 0 Query: 139 EFRCGNGSCIPNLWVCDGKQQCSDGGDE--NVCNGNCSADQFHCRSGYCLPKQFRCDQDNDCFHGDDEMHCDNTTCNIFQFRC-NDGSCIHLSQKCDGRVDCSTGEDEKSCPTTTTSPATTT-------TPRTTTTTTARPVCNG----------------FKCRYGGKCLSNDLICDGTRDCG-GWGEDEECCNTKT----QYRCSHRPGAHVGKCIQASRRCDGYNDCGDSSDEFNCT 347 +F C N CIP W CD + C D DE + C QF C +G C F CD DNDC DE +CD C QF+C N CI +C+G+ +C GEDE+ CP T +P PR +G F+C+ G+C+ CDG DCG G E +E C+ +T Q+RC + +C+ +CD NDCGD+SDE +CT Sbjct: 3338 QFVCKNDKCIPFWWKCDTEDDCGDHSDEPPDCPEFKCRPGQFQCSTGICTNPAFICDGDNDCQDNSDEANCDIHVCLPSQFKCTNTNRCIPGIFRCNGQDNCGDGEDERDCPEVTCAPNQFQCSITKRCIPRVWVCDRDNDCVDGSDEPANCTQMTCGVDEFRCKDSGRCIPARWKCDGEDDCGDGSDEPKEECDERTCEPYQFRCKN------NRCVPGRWQCDYDNDCGDNSDEESCT 3571 HSP 4 Score: 107.071 bits (266), Expect = 1.836e-23 Identity = 79/215 (36.74%), Postives = 105/215 (48.84%), Query Frame = 0 Query: 139 EFRCGN-GSCIPNLWVCDGKQQCSDGGDE--NVCNGN-CSADQFHCRSGYCLPKQFRCDQDNDCFHGDDEMHCDNTTCNIFQFRCNDGSCIHLSQKCDGRVDCSTGEDEKSCPTTTTSPATTTTPRTTTTTTARPVCNGFKCRYGGKCLSNDLICDGTRDCGGWGEDEECCNTKT------QYRCSHRPGAHVGKCIQASRRCDGYNDCGDSSDE 343 EFRC + G CIP W CDG+ C DG DE C+ C QF C++ C+P +++CD DNDC DE C C+ +F C +G CI KCDG DC+ G DEK C TPR + F+C+ G C+ CD DC G DEE C T +++C++ C + +CDG +DCGD+SDE Sbjct: 3498 EFRCKDSGRCIPARWKCDGEDDCGDGSDEPKEECDERTCEPYQFRCKNNRCVPGRWQCDYDNDCGDNSDEESCTPRPCSESEFSCANGRCIAGRWKCDGDHDCADGSDEKDC-----------TPRCDM--------DQFQCK-SGHCIPLRWRCDADADCMD-GSDEEACGTGVRTCPLDEFQCNNT------LCKPLAWKCDGEDDCGDNSDE 3685 HSP 5 Score: 105.145 bits (261), Expect = 6.622e-23 Identity = 87/233 (37.34%), Postives = 108/233 (46.35%), Query Frame = 0 Query: 137 CP--EFRCGNGSCIPNLWVCDGKQQCSDGGDENVCNGNCSA-----DQFHCRSGYCLPKQFRCDQDNDCFHGDDE-MHCDNTTC-NIFQFRCNDGSCIHLSQKCDGRVDCSTGEDEKSCPTTTTSPATTTTPRTTTTTTARPVCNGFKCRYGGKCLSNDLICDGTRDCGGWGEDEECCNTKTQYRCSHRP--GAHV--------GKCIQASRRCDGYNDCGDSSDEFNCTHTT 350 CP F+C N CIPN W+CDG C + DE+ N CSA +QF C SG C+P + CD D+DC DE C TC + QF CN+G CI+++ +CD DC DE C + +S FKC G+C+ CDG DCG + DE N Q + RP G H G CI RCDG DC DSSDE +C T Sbjct: 895 CPSDRFKCENNRCIPNRWLCDGDNDCGNSEDES--NATCSARTCPPNQFSCASGRCIPISWTCDLDDDCGDRSDESASCAYPTCFPLTQFTCNNGRCININWRCDNDNDCGDNSDEAGCSHSCSSTQ-------------------FKCN-SGRCIPEHWTCDGDNDCGDY-SDETHANCTNQ---ATRPPGGCHTDEFQCRLDGLCIPLRWRCDGDTDCMDSSDEKSCEGVT 1101 HSP 6 Score: 98.2117 bits (243), Expect = 9.135e-21 Identity = 84/258 (32.56%), Postives = 110/258 (42.64%), Query Frame = 0 Query: 139 EFRCGNGSCIPNLWVCDGKQQCSDGGDE--NVCNGN-CSADQFHCRSGYCLPKQFRCDQDNDCFHGDDEMHCDNTTCNIFQFRCNDGSCIHLSQKCDGRVDCSTGEDEKSCPTTTTS-------PATTTTP--RTTTTTTARPVCNG-------------------------FKCRYGGKCLSNDLICDGTRDCGGWGEDEECCN---TKTQYRCSHRPGAHVGKCIQASRRCDGYNDCGDSSDE-FNCTHTTTGPAT 355 EF C NG CI CDG C D DE + CN C C +G C+ C+ +DC G DE+ C+ T C + +FRC DG+CI S +C+ VDC DE +C T S P RT+ VC+G F C G+C+ CD DC GEDE CN ++ Q+ C + +CI CDG +DCGD SDE +C T GP++ Sbjct: 2529 EFECANGECINFSLTCDGVPHCKDKSDEKPSYCNSRRCKKTFRQCSNGRCVSNMLWCNGADDCGDGSDEIPCNKTACGVGEFRCRDGTCIGNSSRCNQFVDCEDASDEMNCSATDCSSYFRLGVKGVLFQPCERTSLCYAPSWVCDGANDCGDYSDERDCPGVKRPRCPLNYFACP-SGRCIPMSWTCDKEDDCEH-GEDETHCNKFCSEAQFECQNH------RCISKQWLCDGSDDCGDGSDEAAHCEGKTCGPSS 2778 HSP 7 Score: 95.5153 bits (236), Expect = 5.861e-20 Identity = 80/246 (32.52%), Postives = 105/246 (42.68%), Query Frame = 0 Query: 140 FRCGNGSCIPNLWVCDGKQQCSDGGDENVCNGNCSADQFHCRSGYCLPKQFRCDQDNDCFHGDDE-MHCDNTTCNIFQFRC-NDGSCIHLSQKCDGRVDCSTGEDE---KSCPTTTTSPATTTT-------PRTTTTTTARPVCNG----------------FKCRYGGKCLSN-DLICDGTRDCGGWGED----------EECCNTKTQYRCSHRPGAHVGKCIQASRRCDGYNDCGDSSDEFNC 346 F C +G CIP W CD + C G DE CN CS QF C++ C+ KQ+ CD +DC G DE HC+ TC F C C+ CDG DC+ G DE C +T P+ R +G F+C G+CLS+ CDG DC ++ E CN +Q+ CS G+C+ + C+G +DCGDSSDE C Sbjct: 2701 FACPSGRCIPMSWTCDKEDDCEHGEDETHCNKFCSEAQFECQNHRCISKQWLCDGSDDCGDGSDEAAHCEGKTCGPSSFSCPGTHVCVPERWLCDGDKDCADGADESIAAGCLYNSTCDDREFMCQNRQCIPKHFVCDHDRDCADGSDESPECEYPTCGPSEFRCA-NGRCLSSRQWECDGENDCHDQSDEAPKNPHCTSQEHKCNASSQFLCSS------GRCVAEALLCNGQDDCGDSSDERGC 2939 HSP 8 Score: 95.5153 bits (236), Expect = 6.717e-20 Identity = 82/271 (30.26%), Postives = 113/271 (41.70%), Query Frame = 0 Query: 134 PTICPEFRCGNGS-----------------------------------------------CIPNLWVCDGKQQCSDGGDENVC-NGNCSADQFHCR-SGYCLPKQFRCDQDNDCFHGDDE-MHCDNTTCNIFQFRCND-GSCIHLSQKCDGRVDCSTGEDE--KSCPTTTTSPATTTTPRTTTTTTARPVCNGFKCRYGGKCLSNDLICDGTRDCGGWGEDEECCN----TKTQYRCSHRPGAHVGKCIQASRRCDGYNDCGDSSDEFNCT 347 P CPEF+C G CIP ++ C+G+ C DG DE C C+ +QF C + C+P+ + CD+DNDC G DE +C TC + +FRC D G CI KCDG DC G DE + C T P F+C+ +C+ CD DCG DEE C +++++ C++ G+CI +CDG +DC D SDE +CT Sbjct: 3366 PPDCPEFKCRPGQFQCSTGICTNPAFICDGDNDCQDNSDEANCDIHVCLPSQFKCTNTNRCIPGIFRCNGQDNCGDGEDERDCPEVTCAPNQFQCSITKRCIPRVWVCDRDNDCVDGSDEPANCTQMTCGVDEFRCKDSGRCIPARWKCDGEDDCGDGSDEPKEECDERTCEPYQ------------------FRCK-NNRCVPGRWQCDYDNDCGD-NSDEESCTPRPCSESEFSCAN------GRCIAGRWKCDGDHDCADGSDEKDCT 3610 The following BLAST results are available for this feature:
BLAST of TCONS_00021872-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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