TCONS_00019828-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00019828-protein
Unique NameTCONS_00019828-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length251

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00019828-protein ID=TCONS_00019828-protein|Name=TCONS_00019828-protein|organism=Clytia hemisphaerica|type=polypeptide|length=251bp
MDSTEEDSNMKKTTPLPKATVAVLFSVMYFTELVMTSSFSYLPKLIQEFG
ISNVNVGYYAGILVSCMYIGRTVMSFVTGYMTDSIGHRATLMILCTGITI
STFFFAFTNSYEWAIVCRTIQGTWLCAYITVKGVLSYTCDETNASDAITW
MSASKTLAMVTGQTLGAFTSFPAEQYPSVFPKDSIFGHYKILIPNMVIAL
GMLMTTISIWNIIYSKSKQREILEKKNVLLQQEKDSRSDESLVVRYIKLL
K
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011154XLOC_011154Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00019828TCONS_00019828Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011701MFS
IPR020846MFS_dom
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011701Major facilitator superfamilyPFAMPF07690MFS_1coord: 33..170
e-value: 9.1E-11
score: 41.2
NoneNo IPR availableGENE3D1.20.1250.20coord: 1..242
e-value: 2.4E-22
score: 78.7
IPR020846Major facilitator superfamily domainPROSITEPS50850MFScoord: 18..251
score: 11.016
IPR020846Major facilitator superfamily domainCDDcd06174MFScoord: 21..168
e-value: 3.83563E-9
score: 53.8569
IPR020846Major facilitator superfamily domainSUPERFAMILY103473MFS general substrate transportercoord: 17..210

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00019828-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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