TCONS_00019828 (transcript) - C. hemisphaerica

Overview
NameTCONS_00019828
Unique NameTCONS_00019828
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1061

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00019828 ID=TCONS_00019828|Name=TCONS_00019828|organism=Clytia hemisphaerica|type=transcript|length=1061bp
ttcacactgagacaggggtgtcatgaAATGGAACATAATCAAAAGATATC
CAACAATTAGAAGCGGGTTGGTATAGTGGTTATAATCCTTGACTCCTGCC
TGTGGGGAAGggcaagtgaatataccttcgTCTGGGTCACTGAGTACCAG
GTGAGGACATACTAAATTTTACTGCTCTTTTTATAACATGaagcaattat
ttttcaaatgaaatctTGACAATGGATTATTAATAATACAATTCGACGAA
CTATTCAAAACATTTGACGCTGGCTTAATTATTCAAACTGAGACGGGGGT
GTCGCAAAATGGACTCGACTGAAGAAGACTCTAACATGAAGAAGACTACC
CCGTTACCGAAAGCAACAGTTGCAGTGCTATTTTCTGTTATGTACTTCAC
AGAacttgtgatgacgtcatcattttcatatCTCCCAAAACTAATTCAAG
AGTTTGGTATCAGCAATGTTAATGTGGGATATTATGCTGGTATTCTCGTA
TCTTGCATGTATATTGGTCGTACTGTGATGAGCTTTGTGACTGGGTATAT
GACGGATAGCATTGGGCATCGTGCGACGTTAATGATCTTATGTACTGGCA
TCACCATCAGTACCTTCTTTTTCGCATTTACGAATTCTTATGAATGGGCT
ATCGTTTGTCGCACTATACAAGGAACCTGGCTGTGTGCATACATTACTGT
TAAGGGAGTACTTTCATACACTTGTGACGAAACAAATGCCAGTGACGCAA
TCACATGGATGTCTGCTTCAAAGACTCTTGCCATGGTTACAGGGCAAACT
TTAGGAGCATTTACAAGCTTTCCAGCTGAACAATATCCAAGTGTTTTTCC
AAAAGATTCCATTTTCGGTCATTATAAAATCTTGATACCAAATATGGTCA
TTGCACTTGGAATGTTAATGACAACCATATCTATTTGGAACATCATTTAT
TCAAAATCGAAACAGAGAGAAATTctcgaaaagaaaaatgtattgTTGCA
GCAGGAAAAAGACTCTCGAAGTGACGAATCATTGGTAGTTAGATACATCA
AGCTGTTAAAG
Run BLAST on NCBI

protein sequence of TCONS_00019828-protein

>TCONS_00019828-protein ID=TCONS_00019828-protein|Name=TCONS_00019828-protein|organism=Clytia hemisphaerica|type=polypeptide|length=251bp
MDSTEEDSNMKKTTPLPKATVAVLFSVMYFTELVMTSSFSYLPKLIQEFG
ISNVNVGYYAGILVSCMYIGRTVMSFVTGYMTDSIGHRATLMILCTGITI
STFFFAFTNSYEWAIVCRTIQGTWLCAYITVKGVLSYTCDETNASDAITW
MSASKTLAMVTGQTLGAFTSFPAEQYPSVFPKDSIFGHYKILIPNMVIAL
GMLMTTISIWNIIYSKSKQREILEKKNVLLQQEKDSRSDESLVVRYIKLL
K
Run BLAST on NCBI

transcript from alignment at sc0000338:260793..269725+

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00019828 ID=TCONS_00019828|Name=TCONS_00019828|organism=Clytia hemisphaerica|type=transcript|length=8933bp|location=Sequence derived from alignment at sc0000338:260793..269725+ (Clytia hemisphaerica)
ttcacactgagacaggggtgtcatgaAATGGAACATAATCAAAAGATATC
CAACAATTAGAAGCGGGTTGGTATAGTGGTTATAATCCTTGACTCCTGCC
TGTGGGGAAGggcaagtgaatataccttcgTCTGGGTCACTGAGTACCAG
GTGAGGACATACTAAATTTTACTGCTCTTTTTATAACATGaagcaattat
ttttcaaatgaaatctTGACAATGGATTATTAATAATACAATTCGACGAA
CTATTCAAAACATTTGACGCTGGCTTAATTATTCAAACTGAGACGGGGGT
GTCGCAAAATGGACTCGACTGAAGAAGACTCTAACATGAAGAAGACTACC
CCGTTACCGAAAGCAACAGTTGCAGTGCTATTTTCTGTTATGGTAAGTAA
TCTTGGAGGTGGTGCTCAGTAGtgtagccaagaggggcgcaaaatttgtg
taggagaacaGAATTTTATAACACTGTAGTAATCATCTATTCAtgaatct
gctctcctacacaaattttgcgcccgtCTTGGCTATGCTACTGGGTACTA
TGGTTGAGGGATATATGGTACGGCCTGCGAacccttacccttagagagac
tgactTTTGCTGATAAGGTGACCCTAAGTTGCTAAAAACATAACTCTTAC
TCTTTAGGgagactttttcacaaaaatttctacgattttcaaaaaataaa
atttttccaatactcgagtttgtgaaaaaaacCGACAATACTGCTATTag
tttttttgctgttttgttAACCCTTactttagagagactttgggagggCG
GTGAAAAACCAAACCCTTAATAAGTACATACACAGTGCCAGTGGTAAGTA
ATCTAATTTTATCGAAATAAACCTTTTTGATACATTGCtcataaaggaaa
aaaagatcttGTAGATCTCTTTACGATTAATTTAATTTCAGTACTTCACA
GAacttgtgatgacgtcatcattttcatatCTCCCAAAACTAATTCAAGA
GTTTGGTATCAGCAATGTTAATGTGGGTAAGATATTTTGTCTATTACATG
ATTTTTtacataagaacaaactatataagaacatcaggcTTCGGTGGACA
AGATATTAACAATTTAAGAAAGTTTTAAGGCTATACACTCAAATAGTCAA
GAACGTCTGAAGGCTCTGGGGGGGGGGACCTATacgatctggcctacgtc
atgtacCGCACTTAATGGTGGggttttcagcatcccaaaatgcactgtga
gggtgtgtttctgtgagattgcactgcaagagtcgaattttaaaacaaat
tcaaaataattgttaaaaagaaaggttattACGTCCCGTTTGTTTggaaa
agtttctattgtctgataattacagctgacaagaataattttctaagttt
ttctttgaaacaagaaatttcccaagcttctttttttcacgcagatttac
agcgacgccgggtgacggctagtagtgcactataagggttgggtaaatca
agagaaaatgcactgaaagggtaccttttcagcgaTATTGAACTGCATTG
TAAGGGtacaattttgaaaagcagtttttgcgcggcacataccgtcgttt
ccaaatcgagtgcccccccccgggctccTAAAGCTAGCTACAGCTATTTT
ATGTGTATTCCAGTGGGGACATTATCTTAATTACGGTTTGAGCTCTCCTT
CTTGATGAAAGCTGCTCTGCCTCGTCCCAAATGGCATTTTTGAAGGTAGC
AAATcatacctaagtcacgtgacattataatagaatttcagcgcttgacc
aatcggaagcttcgcgggttttcgaaaacaatagcaataaTCTTTTTTCC
gatactcaattttttttgcctgcgatggatTAAAGCCCGACATCTTCGTG
CTAGATGATCTATGATCGGAATACGCTTATTTTGATGTATGATTCACCAT
ACTAAGAGGGATGGAACTGCTTCCGAGAATTtactttgaatattttaaat
tgaATATGGATGTTTTTCGTTTATTTCAATTTCAGGATATTATGCTGGTA
TTCTCGTATCTTGCATGTATATTGGTCGTACTGTGATGAGGTAAGGTATT
CTCGTATCATGCATGTATATTGGTCGTACTGTGATGAGGTAAGGTATTCT
CGTATCTTGCATGTATATTGGTCGTACTGTGATGAGGTAAGGTATTCTCG
TATCTTGCATGTATATTGGTCGTACTGTGATGAGGTAAGGTATTCTCGTA
TCATGCATGTATATTGGTCGTACTGTGATGAGGTAAGGACTGTTTCTCCG
TGAAAAAATGTATAAGAACAAATATGACTAAAATATtaaacatccctgtc
tcatagccccagtggaactttttttttctgtGGGGATAAGCGATAATGGG
GATAAAAGCTCTATTGCTCCatccaaggttaaaaaaactcagtggggatg
gtttcggAGTGCAacttttaaacatggaatttcgagtgaGAATACAATCa
gagtcaatttcccagtggggctgaaattcaagggtattttcccaccgggg
acgagaaaattttgctcaattttccagtggggctggggtcccgcaaactt
tttttccgtcagcgaacgcagacctgatttagcggtcgaagacctgaatt
aacggccgaagacctgatttaACGGCCGAACCTGATTTAACAAGTCACCG
GTCGAATACCTGATAGATAAGTTAGGGTCAGTTAAACTAGTTAAAGTAGC
TTGAACCACTCGGCAAGGCATCAGTGGCGATGGCCCAGTGCGTGGTTAGT
GCAGTGATATCGAAGACGAAAGATGGGTGGTATCGAAGACGAAAGATAGG
TAGTTCGAGACGAGTTATTGGcattaattttcattctttttaatttaaaa
tcttttaatttaatttgttttcaatactatttcccattgaaacatcatat
aaaaatcttgattgaatTTATAAAAGAGATTTATAGCAAATTTCCACAAT
TCATTTTctccaggtcttcggccgttaaaaAAGTATTCGACCACTGCACC
AAGTCTTCGGtttttaattcaggtcttcggtcgctaaatcaggtctgcgA
CCGCTAATTCAGGTCTGCGTCCGCTGacgaaacaaaaatctgctggggtc
ccagcgggtctatgacacaggggtgttattaaCAATAAAATGAGAGCATT
TTGAGGTTTCGTAAGATTTGAAACATCCAATTCTTAGAAAATTGCTcaga
aatactcaaaaaaggtgaaaagAGAGCATTTTAAAaataggcttaaaact
caaaagtgaagaacatcagaaggctttaaaaattgatgttcttataaaag
aaattgcATGCTATCATGCTTTTCTTTCAAACTTTAGCTTTGTGACTGGG
TATATGACGGATAGCATTGGGCATCGTGCGACGTTAATGATCTTATGTAC
TGGCATCACCATCAGTACCTTCTTTTTCGCATTTACGAATTCTTATGAAT
GGGCTATCGTTTGTCGCACTATACAAGGAACCTGGCTGTGTGCATACATT
ACTGTTAAGGTGAATATTGTGTTTCAACCCTGTCCCTCACGGgagggacc
taattgccggggggttggaattactgctgaaaatccaaaaataaggtaaa
tataggctaaaatcaggatATTTCGAGCGAAATAAGGGACCTTCTTTTTG
ACggctaaaaatattcttagaaaTTAATAAGctgggggggggtcctaata
aggtccggtgGGGGTCGGAAAATTTTCAAGCAATTAATAAGCGGGAGGCC
CCTTTATTTCGAACCTAAGAGTGCAAAACTTTGAACTGGTCGTATACACT
TTAGGGAGTACTTTCATACACTTGTGACGAAACAAATGCCAGTGACGCAA
TCACATGGATGTCTGCTTCAAAGACTCTTGCCATGGTTACAGGGCAAACT
TTAGGAGGTAAAGATACTGTTTTAACTTTAactttcaaagactttaaaCT
ATGATAAAAGCTTTTAACTTGAAAGTTAGACAATAGCTTTGGTTCCATTA
GAAagacatttttaaatttttcaatctttttaatCAAGTGGTCTTGAATT
ATAGCCTTAAGTCTGGGACTTGATATATTGGCTGATTTTGAATGTACATA
CACGTCATTTAGGTCAAATAGaccctttaaaaatatttttggtgctGAAG
ACAATTACTATTGCCCTTCAATTATGATTTTTAGTCATTATTGGCGGTTC
GGAGtaatttgaaagaaagaaatctatgtttagatttagatttattCGTC
tggtaaaaatgaaattttccttgtaaattcattaaCAGTTCGCTCAAAGG
CCGACTGCACTATCAAATAaacagattttaaacccatttttAAGAGCACC
GTAAAAACATTTAAACcttaaaacttcaaaaaattaagaacagctcagcc
tgagccaaaatttactggttcttataacaAAAGTAAGTATATTACATTTT
CACTTTCATAGTTTCGATATgtctttttttgtcttttagCATTTACAAGC
TTTCCAGCTGAACAATATCCAAGTGTTTTTCCAAAAGGTAATCTCTGAAT
TTTCATTTCGATGGACTTTGGACTTGTTCCAAAAAGAGCGAGTAATCAAA
ATTCTGACTAAATATATCAAAGTCCAGTTCTGAAAGTTCAAAACACGGAT
TGTCTTTAAGAGAGATACATATCTGAGGCTCCAGCCGTAATGGGTGGTAG
ATGGAGAAAAACAGCGGTAAAGTTTGGAAGAAGCTGTAAAAAACTCAGGA
GCTGTTTACTCCACCCCAGGGTTGATCTACCTCCTAAATTATTCCCCCTT
TTTAGTGACCTTGCGTagagacgataggatcgtcaaCCTTTTCAAATATC
ATTTCGGttattcccagctggcacacaacgttgtttatggacgttgtgaa
tgtcagaaaaacgttgaaacgcTGGGTTCATATTCTCtgttttttgtcta
ttttgttCAGATTCCATTTTCGGTCATTATAAAATCTTGATACCAAATAT
GGTCATTGCACTTGGAATGTTAATGACAACCATATCTATTTGGAACATCA
TTTATTCAAAATCGAAACAGAGAGAAATGTAAGTTCATGAAACTGTGACT
TTGCGTAATGTCGACAAACGTTGTCTAATTTcgtcatagcaactatctgg
tctgcaaagtagTTAGAGTACTAATCTTTTTAAACAGCTCACTTCAGaat
gttttatttataaacatttaaaagactAGATAGTTGCTATGGTGGAATTA
TACAGGATACTATAGTTATATGGGTGTttaagcatagtataagaaagccg
cggctggaatgataacatctgaatttctgttgttctatctctgtcgtatt
tgatgactatttgttgatcaagaaNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNgaaatctttttagaaatcaatgaaatagtacatcaagataat
actgtgaaaatttcaagccagcaccttcaaaatttatcattcaaactgac
aggaaagttgtgaTCGTGAATatatttcttataattttaattttggcgat
agactatcgtttccacaaaatacccctaaaatatgtctaAAATCAGTTCA
AGTTTTCTATTGTACAGATTCAAAAatatctagcaataaaaaaccttttg
tgaaggaaaataagaaaaaatttcaaaaactatctaccaataataaactg
acaatcttgatgttcttataaagctcggagacagagatagaacagcaatt
aactgaaaagacaatgcagtacatattccagccgcggctttcttatacta
tggtttaAGGTtatacgataattgttacgggaaAATATCATTTGTATAAC
GTACAATTGGTCctttccattattttttgcttaattAAACATCAAATTGG
ACTTTGTTAGTGTAAATTTAAGTATGTTAGGGGATTCGCTGCATCGAAAG
GGGGTTTAAAGGAATTTTCATTTGCGTGTCCAATTTCCGTCGTTTGGTCA
ACGAATATGCCAGTCTTAAATCCTATTATATCTAACCCACAGActtttat
ataccctggaccaagctatatccatcATTCTTTGACCGGAGTTTTCTTTA
AAGTGCAGCTGTTAATAATTAATGTTTAACGGCGctaaatcatcaaaagt
attgaggaaaagtagatctagcgctctcgatgcatttacaccgctattga
gtagtactactattagggtaccactttcaaaaaaattccgaTGACCAGGA
TTGAGAAACTTAGTCCATAGTATATAAAGATCAGTGATCTAACCTTCCCA
TTAAGATTGAGAAATGGAATCACGCTAACTATAATTTCGATTCTTGGGCG
cttccaaaaaatttgaatatggaggCTGGAGGatataaatttttatcccc
ttacattgtgacttttgaccccctcCCCAGACAACATGTCTCACCCcttg
gacaagcatcagttgaacCCCGGACACTCGAAATTGTCCCTaaaacagag
caagtttgcccCTAAGTCAATTTctgcagatttttcactactcCCACTAC
ATATCCAATATATTCTCCAATAGCAGGGGCTCTTTCAGAAAATTTTCgta
aagagggggggggggctttacgaaatttttttggaagagctcctgctaaa
aataggctaaaaatattattttctgtATATACAGTTGCTCCTAAAGAGTT
GGGACTTTCCAAATATTTGATATTCCCTCCCTCTTGCCGTACACCCAGTG
AACAATAGTAATGACACCATTCAAACAATATACTGGCTAAACTCCATTCT
CctccttcactgcgtacgttcTAAATGGATGGCGGCTTCTTCCAAAACAT
CATATTTTCTTTTCAGTctcgaaaagaaaaatgtattgTTGCAGCAGGAA
AAAGACTCTCGAAGTGACGAATCATTGGTAGTTAGATACATCAAGCTTTT
aaagtaattctttttttttttttttataaattcctttgaaatttttagac
TCGAGAAAAGTATTTTACGGACCGGCCCAAAATTTCCCTTTTTACCTATT
CAGCCCTAGATTACTGTAACTGGTGATTAgaaaatgctattgacttgaaa
ttttgaaatagtgTCATATAGTGATAATACAACGTGGCAATCGAGCggtt
atgctgaaagtgagcattttaggtaaaaaaaggaccggtctgtaaaatac
caaccacaACAACCNtagttccaatcttgttcaaatttacaaatgagctg
cattttagtctccattgccatattccatttaatcggtatttgaaatataa
attcCGTGTTGtctgttgagtttgaaaaatcaagccaccaattcgttaaa
cgagacagatctagaaataaccattttcacacgtagtatcattgaaaaag
ttccaatcttgttatANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT
ACGGGAAAATATCATTTGTATAACGTACAATTGGTCctttccattatttt
ttgcttaattAAACATCAAATTGGACTTTGTTAGTGTAAATTTAAGTATG
TTAGGGGATTCGCTGCATCGAAAGGGGGTTTAAAGGAATTTTCATTTGCG
TGTCCAATTTCCGTCGTTTGGTCAACGAATATGCCAGTCTTAAATCCTAT
TATATCTAACCCAcagacctttatataccctggaccaagctatatctatC
ATTTTTTGACAGGAGTTTTCTTTAAAGTGCAGCTGTTAATAAATTAATGT
TAAACGGCGctaaatcatcaaaagtatttgaggaaaagtaaatctagcgc
tctcgatgcatttacaccgctattgagtagtactactattagggtaccac
tttcaaaaaaattccgaTGGCCAGGATTGAGAAAATTAGTCCAgagtata
taaaggtcagtgatctAACCTCCCCATTAAGATTGAAAAATGGAATCACG
GTAACTATAATTTCGATTCTTGGGcgtttccagaaaaaatttgaatatgg
aggCTGGAGGATATAAAAGTCTTTGGAAATTTACTAGTAATGACACCATT
CAAACAATATACTGGCTAAACTCCATTCTCctccttcactgcgtacgttc
TAAATGGATGGCGGCTTCTTCCAAAACATCATATTTTCTTTTCAGTCTCG
AAAAGAAAGATGTATTGTTGCAGCAGGAAAAAGACTCTCAAAGTGACGAA
TCATTGATAATTAGATACATCAAGCTGTTAAAG

Coding sequence (CDS) from alignment at sc0000338:260793..269725+

>TCONS_00019828 ID=TCONS_00019828|Name=TCONS_00019828|organism=Clytia hemisphaerica|type=CDS|length=7530bp|location=Sequence derived from alignment at sc0000338:260793..269725+ (Clytia hemisphaerica)
ATGGACTCGACTGAAGAAGACTCTAACATGAAGAAGACTACCCCGTTACC
GAAAGCAACAGTTGCAGTGCTATTTTCTGTTATGTACTTCACAGAacttg
tgatgacgtcatcattttcatatCTCCCAAAACTAATTCAAGAGTTTGGT
ATCAGCAATGTTAATGTGGGATATTATGCTGGTATTCTCGTATCTTGCAT
GTATATTGGTCGTACTGTGATGAGCTTTGTGACTGGGTATATGACGGATA
GCATTGGGCATCGTGCGACGTTAATGATCTTATGTACTGGCATCACCATC
AGTACCTTCTTTTTCGCATTTACGAATTCTTATGAATGGGCTATCGTTTG
TCGCACTATACAAGGAACCTGGCTGTGTGCATACATTACTGTTAAGGGAG
TACTTTCATACACTTGTGACGAAACAAATGCCAGTGACGCAATCACATGG
ATGTCTGCTTCAAAGACTCTTGCCATGGTTACAGGGCAAACTTTAGGAGC
ATTTACAAGCTTTCCAGCTGAACAATATCCAAGTGTTTTTCCAAAAGATT
CCATTTTCGGTCATTATAAAATCTTGATACCAAATATGGTCATTGCACTT
GGAATGTTAATGACAACCATATCTATTTGGAACATCATTTATTCAAAATC
GAAACAGAGAGAAATTctcgaaaagaaaaatgtattgTTGCAGCAGGAAA
AAGACTCTCGAAGTGACGAATCATTGGTAGTTAGATACATCAAGCTGTTA
AAGATGGACTCGACTGAAGAAGACTCTAACATGAAGAAGACTACCCCGTT
ACCGAAAGCAACAGTTGCAGTGCTATTTTCTGTTATGTACTTCACAGAac
ttgtgatgacgtcatcattttcatatCTCCCAAAACTAATTCAAGAGTTT
GGTATCAGCAATGTTAATGTGGGATATTATGCTGGTATTCTCGTATCTTG
CATGTATATTGGTCGTACTGTGATGAGCTTTGTGACTGGGTATATGACGG
ATAGCATTGGGCATCGTGCGACGTTAATGATCTTATGTACTGGCATCACC
ATCAGTACCTTCTTTTTCGCATTTACGAATTCTTATGAATGGGCTATCGT
TTGTCGCACTATACAAGGAACCTGGCTGTGTGCATACATTACTGTTAAGG
GAGTACTTTCATACACTTGTGACGAAACAAATGCCAGTGACGCAATCACA
TGGATGTCTGCTTCAAAGACTCTTGCCATGGTTACAGGGCAAACTTTAGG
AGCATTTACAAGCTTTCCAGCTGAACAATATCCAAGTGTTTTTCCAAAAG
ATTCCATTTTCGGTCATTATAAAATCTTGATACCAAATATGGTCATTGCA
CTTGGAATGTTAATGACAACCATATCTATTTGGAACATCATTTATTCAAA
ATCGAAACAGAGAGAAATTctcgaaaagaaaaatgtattgTTGCAGCAGG
AAAAAGACTCTCGAAGTGACGAATCATTGGTAGTTAGATACATCAAGCTG
TTAAAGATGGACTCGACTGAAGAAGACTCTAACATGAAGAAGACTACCCC
GTTACCGAAAGCAACAGTTGCAGTGCTATTTTCTGTTATGTACTTCACAG
AacttgtgatgacgtcatcattttcatatCTCCCAAAACTAATTCAAGAG
TTTGGTATCAGCAATGTTAATGTGGGATATTATGCTGGTATTCTCGTATC
TTGCATGTATATTGGTCGTACTGTGATGAGCTTTGTGACTGGGTATATGA
CGGATAGCATTGGGCATCGTGCGACGTTAATGATCTTATGTACTGGCATC
ACCATCAGTACCTTCTTTTTCGCATTTACGAATTCTTATGAATGGGCTAT
CGTTTGTCGCACTATACAAGGAACCTGGCTGTGTGCATACATTACTGTTA
AGGGAGTACTTTCATACACTTGTGACGAAACAAATGCCAGTGACGCAATC
ACATGGATGTCTGCTTCAAAGACTCTTGCCATGGTTACAGGGCAAACTTT
AGGAGCATTTACAAGCTTTCCAGCTGAACAATATCCAAGTGTTTTTCCAA
AAGATTCCATTTTCGGTCATTATAAAATCTTGATACCAAATATGGTCATT
GCACTTGGAATGTTAATGACAACCATATCTATTTGGAACATCATTTATTC
AAAATCGAAACAGAGAGAAATTctcgaaaagaaaaatgtattgTTGCAGC
AGGAAAAAGACTCTCGAAGTGACGAATCATTGGTAGTTAGATACATCAAG
CTGTTAAAGATGGACTCGACTGAAGAAGACTCTAACATGAAGAAGACTAC
CCCGTTACCGAAAGCAACAGTTGCAGTGCTATTTTCTGTTATGTACTTCA
CAGAacttgtgatgacgtcatcattttcatatCTCCCAAAACTAATTCAA
GAGTTTGGTATCAGCAATGTTAATGTGGGATATTATGCTGGTATTCTCGT
ATCTTGCATGTATATTGGTCGTACTGTGATGAGCTTTGTGACTGGGTATA
TGACGGATAGCATTGGGCATCGTGCGACGTTAATGATCTTATGTACTGGC
ATCACCATCAGTACCTTCTTTTTCGCATTTACGAATTCTTATGAATGGGC
TATCGTTTGTCGCACTATACAAGGAACCTGGCTGTGTGCATACATTACTG
TTAAGGGAGTACTTTCATACACTTGTGACGAAACAAATGCCAGTGACGCA
ATCACATGGATGTCTGCTTCAAAGACTCTTGCCATGGTTACAGGGCAAAC
TTTAGGAGCATTTACAAGCTTTCCAGCTGAACAATATCCAAGTGTTTTTC
CAAAAGATTCCATTTTCGGTCATTATAAAATCTTGATACCAAATATGGTC
ATTGCACTTGGAATGTTAATGACAACCATATCTATTTGGAACATCATTTA
TTCAAAATCGAAACAGAGAGAAATTctcgaaaagaaaaatgtattgTTGC
AGCAGGAAAAAGACTCTCGAAGTGACGAATCATTGGTAGTTAGATACATC
AAGCTGTTAAAGATGGACTCGACTGAAGAAGACTCTAACATGAAGAAGAC
TACCCCGTTACCGAAAGCAACAGTTGCAGTGCTATTTTCTGTTATGTACT
TCACAGAacttgtgatgacgtcatcattttcatatCTCCCAAAACTAATT
CAAGAGTTTGGTATCAGCAATGTTAATGTGGGATATTATGCTGGTATTCT
CGTATCTTGCATGTATATTGGTCGTACTGTGATGAGCTTTGTGACTGGGT
ATATGACGGATAGCATTGGGCATCGTGCGACGTTAATGATCTTATGTACT
GGCATCACCATCAGTACCTTCTTTTTCGCATTTACGAATTCTTATGAATG
GGCTATCGTTTGTCGCACTATACAAGGAACCTGGCTGTGTGCATACATTA
CTGTTAAGGGAGTACTTTCATACACTTGTGACGAAACAAATGCCAGTGAC
GCAATCACATGGATGTCTGCTTCAAAGACTCTTGCCATGGTTACAGGGCA
AACTTTAGGAGCATTTACAAGCTTTCCAGCTGAACAATATCCAAGTGTTT
TTCCAAAAGATTCCATTTTCGGTCATTATAAAATCTTGATACCAAATATG
GTCATTGCACTTGGAATGTTAATGACAACCATATCTATTTGGAACATCAT
TTATTCAAAATCGAAACAGAGAGAAATTctcgaaaagaaaaatgtattgT
TGCAGCAGGAAAAAGACTCTCGAAGTGACGAATCATTGGTAGTTAGATAC
ATCAAGCTGTTAAAGATGGACTCGACTGAAGAAGACTCTAACATGAAGAA
GACTACCCCGTTACCGAAAGCAACAGTTGCAGTGCTATTTTCTGTTATGT
ACTTCACAGAacttgtgatgacgtcatcattttcatatCTCCCAAAACTA
ATTCAAGAGTTTGGTATCAGCAATGTTAATGTGGGATATTATGCTGGTAT
TCTCGTATCTTGCATGTATATTGGTCGTACTGTGATGAGCTTTGTGACTG
GGTATATGACGGATAGCATTGGGCATCGTGCGACGTTAATGATCTTATGT
ACTGGCATCACCATCAGTACCTTCTTTTTCGCATTTACGAATTCTTATGA
ATGGGCTATCGTTTGTCGCACTATACAAGGAACCTGGCTGTGTGCATACA
TTACTGTTAAGGGAGTACTTTCATACACTTGTGACGAAACAAATGCCAGT
GACGCAATCACATGGATGTCTGCTTCAAAGACTCTTGCCATGGTTACAGG
GCAAACTTTAGGAGCATTTACAAGCTTTCCAGCTGAACAATATCCAAGTG
TTTTTCCAAAAGATTCCATTTTCGGTCATTATAAAATCTTGATACCAAAT
ATGGTCATTGCACTTGGAATGTTAATGACAACCATATCTATTTGGAACAT
CATTTATTCAAAATCGAAACAGAGAGAAATTctcgaaaagaaaaatgtat
tgTTGCAGCAGGAAAAAGACTCTCGAAGTGACGAATCATTGGTAGTTAGA
TACATCAAGCTGTTAAAGATGGACTCGACTGAAGAAGACTCTAACATGAA
GAAGACTACCCCGTTACCGAAAGCAACAGTTGCAGTGCTATTTTCTGTTA
TGTACTTCACAGAacttgtgatgacgtcatcattttcatatCTCCCAAAA
CTAATTCAAGAGTTTGGTATCAGCAATGTTAATGTGGGATATTATGCTGG
TATTCTCGTATCTTGCATGTATATTGGTCGTACTGTGATGAGCTTTGTGA
CTGGGTATATGACGGATAGCATTGGGCATCGTGCGACGTTAATGATCTTA
TGTACTGGCATCACCATCAGTACCTTCTTTTTCGCATTTACGAATTCTTA
TGAATGGGCTATCGTTTGTCGCACTATACAAGGAACCTGGCTGTGTGCAT
ACATTACTGTTAAGGGAGTACTTTCATACACTTGTGACGAAACAAATGCC
AGTGACGCAATCACATGGATGTCTGCTTCAAAGACTCTTGCCATGGTTAC
AGGGCAAACTTTAGGAGCATTTACAAGCTTTCCAGCTGAACAATATCCAA
GTGTTTTTCCAAAAGATTCCATTTTCGGTCATTATAAAATCTTGATACCA
AATATGGTCATTGCACTTGGAATGTTAATGACAACCATATCTATTTGGAA
CATCATTTATTCAAAATCGAAACAGAGAGAAATTctcgaaaagaaaaatg
tattgTTGCAGCAGGAAAAAGACTCTCGAAGTGACGAATCATTGGTAGTT
AGATACATCAAGCTGTTAAAGATGGACTCGACTGAAGAAGACTCTAACAT
GAAGAAGACTACCCCGTTACCGAAAGCAACAGTTGCAGTGCTATTTTCTG
TTATGTACTTCACAGAacttgtgatgacgtcatcattttcatatCTCCCA
AAACTAATTCAAGAGTTTGGTATCAGCAATGTTAATGTGGGATATTATGC
TGGTATTCTCGTATCTTGCATGTATATTGGTCGTACTGTGATGAGCTTTG
TGACTGGGTATATGACGGATAGCATTGGGCATCGTGCGACGTTAATGATC
TTATGTACTGGCATCACCATCAGTACCTTCTTTTTCGCATTTACGAATTC
TTATGAATGGGCTATCGTTTGTCGCACTATACAAGGAACCTGGCTGTGTG
CATACATTACTGTTAAGGGAGTACTTTCATACACTTGTGACGAAACAAAT
GCCAGTGACGCAATCACATGGATGTCTGCTTCAAAGACTCTTGCCATGGT
TACAGGGCAAACTTTAGGAGCATTTACAAGCTTTCCAGCTGAACAATATC
CAAGTGTTTTTCCAAAAGATTCCATTTTCGGTCATTATAAAATCTTGATA
CCAAATATGGTCATTGCACTTGGAATGTTAATGACAACCATATCTATTTG
GAACATCATTTATTCAAAATCGAAACAGAGAGAAATTctcgaaaagaaaa
atgtattgTTGCAGCAGGAAAAAGACTCTCGAAGTGACGAATCATTGGTA
GTTAGATACATCAAGCTGTTAAAGATGGACTCGACTGAAGAAGACTCTAA
CATGAAGAAGACTACCCCGTTACCGAAAGCAACAGTTGCAGTGCTATTTT
CTGTTATGTACTTCACAGAacttgtgatgacgtcatcattttcatatCTC
CCAAAACTAATTCAAGAGTTTGGTATCAGCAATGTTAATGTGGGATATTA
TGCTGGTATTCTCGTATCTTGCATGTATATTGGTCGTACTGTGATGAGCT
TTGTGACTGGGTATATGACGGATAGCATTGGGCATCGTGCGACGTTAATG
ATCTTATGTACTGGCATCACCATCAGTACCTTCTTTTTCGCATTTACGAA
TTCTTATGAATGGGCTATCGTTTGTCGCACTATACAAGGAACCTGGCTGT
GTGCATACATTACTGTTAAGGGAGTACTTTCATACACTTGTGACGAAACA
AATGCCAGTGACGCAATCACATGGATGTCTGCTTCAAAGACTCTTGCCAT
GGTTACAGGGCAAACTTTAGGAGCATTTACAAGCTTTCCAGCTGAACAAT
ATCCAAGTGTTTTTCCAAAAGATTCCATTTTCGGTCATTATAAAATCTTG
ATACCAAATATGGTCATTGCACTTGGAATGTTAATGACAACCATATCTAT
TTGGAACATCATTTATTCAAAATCGAAACAGAGAGAAATTctcgaaaaga
aaaatgtattgTTGCAGCAGGAAAAAGACTCTCGAAGTGACGAATCATTG
GTAGTTAGATACATCAAGCTGTTAAAGATGGACTCGACTGAAGAAGACTC
TAACATGAAGAAGACTACCCCGTTACCGAAAGCAACAGTTGCAGTGCTAT
TTTCTGTTATGTACTTCACAGAacttgtgatgacgtcatcattttcatat
CTCCCAAAACTAATTCAAGAGTTTGGTATCAGCAATGTTAATGTGGGATA
TTATGCTGGTATTCTCGTATCTTGCATGTATATTGGTCGTACTGTGATGA
GCTTTGTGACTGGGTATATGACGGATAGCATTGGGCATCGTGCGACGTTA
ATGATCTTATGTACTGGCATCACCATCAGTACCTTCTTTTTCGCATTTAC
GAATTCTTATGAATGGGCTATCGTTTGTCGCACTATACAAGGAACCTGGC
TGTGTGCATACATTACTGTTAAGGGAGTACTTTCATACACTTGTGACGAA
ACAAATGCCAGTGACGCAATCACATGGATGTCTGCTTCAAAGACTCTTGC
CATGGTTACAGGGCAAACTTTAGGAGCATTTACAAGCTTTCCAGCTGAAC
AATATCCAAGTGTTTTTCCAAAAGATTCCATTTTCGGTCATTATAAAATC
TTGATACCAAATATGGTCATTGCACTTGGAATGTTAATGACAACCATATC
TATTTGGAACATCATTTATTCAAAATCGAAACAGAGAGAAATTctcgaaa
agaaaaatgtattgTTGCAGCAGGAAAAAGACTCTCGAAGTGACGAATCA
TTGGTAGTTAGATACATCAAGCTGTTAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011154XLOC_011154Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00019828-proteinTCONS_00019828-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00019828-exon-sc0000338-1491911889:260793..261184TCONS_00019828-exon-sc0000338-1491911889:260793..261184Clytia hemisphaericaexon
TCONS_00019828-exon-sc0000338-1510915933:260793..261184TCONS_00019828-exon-sc0000338-1510915933:260793..261184Clytia hemisphaericaexon
TCONS_00019828-exon-sc0000338-1575043694:260793..261184TCONS_00019828-exon-sc0000338-1575043694:260793..261184Clytia hemisphaericaexon
TCONS_00019828-exon-sc0000338-1491911889:261734..261818TCONS_00019828-exon-sc0000338-1491911889:261734..261818Clytia hemisphaericaexon
TCONS_00019828-exon-sc0000338-1510915933:261734..261818TCONS_00019828-exon-sc0000338-1510915933:261734..261818Clytia hemisphaericaexon
TCONS_00019828-exon-sc0000338-1575043694:261734..261818TCONS_00019828-exon-sc0000338-1575043694:261734..261818Clytia hemisphaericaexon
TCONS_00019828-exon-sc0000338-1491911889:262828..262858TCONS_00019828-exon-sc0000338-1491911889:262828..262858Clytia hemisphaericaexon
TCONS_00019828-exon-sc0000338-1510915933:262828..262858TCONS_00019828-exon-sc0000338-1510915933:262828..262858Clytia hemisphaericaexon
TCONS_00019828-exon-sc0000338-1575043694:262828..262858TCONS_00019828-exon-sc0000338-1575043694:262828..262858Clytia hemisphaericaexon
TCONS_00019828-exon-sc0000338-1491911889:262907..262930TCONS_00019828-exon-sc0000338-1491911889:262907..262930Clytia hemisphaericaexon
TCONS_00019828-exon-sc0000338-1510915933:262907..262930TCONS_00019828-exon-sc0000338-1510915933:262907..262930Clytia hemisphaericaexon
TCONS_00019828-exon-sc0000338-1575043694:262907..262930TCONS_00019828-exon-sc0000338-1575043694:262907..262930Clytia hemisphaericaexon
TCONS_00019828-exon-sc0000338-1491911889:264180..264351TCONS_00019828-exon-sc0000338-1491911889:264180..264351Clytia hemisphaericaexon
TCONS_00019828-exon-sc0000338-1510915933:264180..264351TCONS_00019828-exon-sc0000338-1510915933:264180..264351Clytia hemisphaericaexon
TCONS_00019828-exon-sc0000338-1575043694:264180..264351TCONS_00019828-exon-sc0000338-1575043694:264180..264351Clytia hemisphaericaexon
TCONS_00019828-exon-sc0000338-1491911889:264647..264749TCONS_00019828-exon-sc0000338-1491911889:264647..264749Clytia hemisphaericaexon
TCONS_00019828-exon-sc0000338-1510915933:264647..264749TCONS_00019828-exon-sc0000338-1510915933:264647..264749Clytia hemisphaericaexon
TCONS_00019828-exon-sc0000338-1575043694:264647..264749TCONS_00019828-exon-sc0000338-1575043694:264647..264749Clytia hemisphaericaexon
TCONS_00019828-exon-sc0000338-1491911889:265332..265379TCONS_00019828-exon-sc0000338-1491911889:265332..265379Clytia hemisphaericaexon
TCONS_00019828-exon-sc0000338-1510915933:265332..265379TCONS_00019828-exon-sc0000338-1510915933:265332..265379Clytia hemisphaericaexon
TCONS_00019828-exon-sc0000338-1575043694:265332..265379TCONS_00019828-exon-sc0000338-1575043694:265332..265379Clytia hemisphaericaexon
TCONS_00019828-exon-sc0000338-1491911889:265803..265920TCONS_00019828-exon-sc0000338-1491911889:265803..265920Clytia hemisphaericaexon
TCONS_00019828-exon-sc0000338-1510915933:265803..265920TCONS_00019828-exon-sc0000338-1510915933:265803..265920Clytia hemisphaericaexon
TCONS_00019828-exon-sc0000338-1575043694:265803..265920TCONS_00019828-exon-sc0000338-1575043694:265803..265920Clytia hemisphaericaexon
TCONS_00019828-exon-sc0000338-1491911889:268359..268431TCONS_00019828-exon-sc0000338-1491911889:268359..268431Clytia hemisphaericaexon
TCONS_00019828-exon-sc0000338-1510915933:268359..268431TCONS_00019828-exon-sc0000338-1510915933:268359..268431Clytia hemisphaericaexon
TCONS_00019828-exon-sc0000338-1575043694:268359..268431TCONS_00019828-exon-sc0000338-1575043694:268359..268431Clytia hemisphaericaexon
TCONS_00019828-exon-sc0000338-1491911889:269711..269725TCONS_00019828-exon-sc0000338-1491911889:269711..269725Clytia hemisphaericaexon
TCONS_00019828-exon-sc0000338-1510915933:269711..269725TCONS_00019828-exon-sc0000338-1510915933:269711..269725Clytia hemisphaericaexon
TCONS_00019828-exon-sc0000338-1575043694:269711..269725TCONS_00019828-exon-sc0000338-1575043694:269711..269725Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000338supercontigsc0000338:260793..269725 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.00267271	3.50287	1.70721	0.785996	7.29617	5.38743	7.469	8.15213	10.3645	13.7392	6.0744	8.86828	0.040957	0.551335	0.0148189	1.81053	4.56068	4.77715	1.46126	0	7.93231	7.90551	2.28814	1.6849	1.7314	1.82724	0.0951997	0	2.77152e-05	1.10329
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR011701MFS
IPR020846MFS_dom
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00019828 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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