TCONS_00018806-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00018806-protein
Unique NameTCONS_00018806-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length301

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00018806-protein ID=TCONS_00018806-protein|Name=TCONS_00018806-protein|organism=Clytia hemisphaerica|type=polypeptide|length=301bp
QCPKDRRVITLFDDLGKERELLELSVKCPNIQNGCEWVDSLRKFETHVAN
CGYVLLGCTNSDCSEKVIKKEFEDHVENKCKHRMDQVITYRQFKLVLEKI
RDLEEKVQSQETVINAQNEKIKMMGKLSEFHAERISAMRMLADKNEKRLN
NQQAVHEARSRVSEARQVEQSGELKKLESKINSLEFSNGHNGGHIVDLQS
KEDKRDEEIESFEKKIDILHKKFHPKSKMLFNDSHIWKINAVKKKMEKAA
NSSEEECLEKYFYTSRGYRIEVNLYLNGWADAKGKYVSVGLRLVKGCFDD
E
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010535XLOC_010535Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00018806TCONS_00018806Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001293Znf_TRAF
IPR008974TRAF-like
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 100..120
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 19..76
e-value: 9.7E-14
score: 50.8
IPR001293Zinc finger, TRAF-typePFAMPF02176zf-TRAFcoord: 47..83
e-value: 3.3E-6
score: 27.6
IPR001293Zinc finger, TRAF-typePROSITEPS50145ZF_TRAFcoord: 46..83
score: 9.405
IPR008974TRAF-likeGENE3D2.60.210.10coord: 199..301
e-value: 1.9E-8
score: 33.8
IPR008974TRAF-likeSUPERFAMILY49599TRAF domain-likecoord: 232..299
IPR008974TRAF-likeSUPERFAMILY49599TRAF domain-likecoord: 23..94

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00018806-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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