TCONS_00017249-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00017249-protein
Unique NameTCONS_00017249-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length361

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00017249-protein ID=TCONS_00017249-protein|Name=TCONS_00017249-protein|organism=Clytia hemisphaerica|type=polypeptide|length=361bp
MKVFLILMLAYLPILLLKADSAHDIKILKLQVKALIKMVTDANQKVSQTN
NRLTQEVTNVRQEASRNLTRENQAINKKLSQSSQAMSQKLSQTNQDLQAL
KDKDQTLNGFCKTKSTVCGSCFCVEDFNIPAKFYCDCRAKPARRDCKEHY
LQGERTNGLYRINMNTYGMVVPAYCDQNTDGGGWTVVQRRVDDSTNFYRN
WKPYKEGFGQIHHEHWLGNDNLNLLTAQAVLTGSEIRFELGIKGKNYRRY
AKYSNFHVDAESNAYQLHISGYSAGNLGDRMSYHNGMKWTTQDRDNDKWA
YNCAAYTNGYIGAWWYNNCVTASGCSLNSPYDRYSRERSIGHYFIWHPYR
LQSSEMKVRRK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009650XLOC_009650Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00017249TCONS_00017249Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002181Fibrinogen_a/b/g_C_dom
IPR014716Fibrinogen_a/b/g_C_1
IPR014715Fibrinogen_a/b/g_C_2
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 43..63
NoneNo IPR availableCOILSCoilCoilcoord: 83..103
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSMARTSM00186FBG_2coord: 141..361
e-value: 1.3E-65
score: 234.0
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPFAMPF00147Fibrinogen_Ccoord: 143..359
e-value: 8.2E-51
score: 172.8
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPROSITEPS51406FIBRINOGEN_C_2coord: 137..361
score: 47.413
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainCDDcd00087FReDcoord: 141..361
e-value: 3.05531E-79
score: 243.302
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 137..360
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 25..287
e-value: 7.2E-55
score: 185.4
IPR014715Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 2GENE3D4.10.530.10coord: 288..358
e-value: 3.2E-17
score: 61.9

Blast
[Close]
BLAST of TCONS_00017249-protein vs. Swiss-Prot (Human)
Match: FBCD1 (Fibrinogen C domain-containing protein 1 OS=Homo sapiens GN=FIBCD1 PE=1 SV=2)

HSP 1 Score: 162.925 bits (411), Expect = 4.975e-46
Identity = 112/344 (32.56%), Postives = 164/344 (47.67%), Query Frame = 0 
Query:   33 KALIKMVTDANQKVSQTNNRLTQEVTNVRQEASRNLTRENQAINKKLSQSSQAMSQKLSQTNQDLQALKDKDQTLNGFCKTKSTVCGSCFCVEDFNIPAKFYCDCRAKPAR-------------RDCKEHYLQGERTNGLYRINMNTYGMVVPAYCDQNTDGGGWTVVQRRVDDSTNFYRNWKPYKEGFGQIHHEHWLGNDNLNLLTAQAVLTGSEIRFELGIKGKNYRRYAKYSN--FHVDAESNAYQLHISGYSAGNLGDRMSYHNGMKWTTQDRDNDKWAYNCAAYTNGYIGAWWYNNCVTA--SGCSLNSPYDRYSRERSIGHYFIWHPYRLQSSEMKVR 359
            +A  ++V D  Q++  T   L  ++  +   AS  L  E   + K      Q +S   S+  + +Q L +    +     + S +  +         P +   D +  PAR             RDC +  L G++ +G+Y +    Y      YCD  TDGGGWTV QRR D S NF+R W  Y++GFG++  EHWLG   ++ LT QA      +  E    G  Y RY  +    F VD E + Y L ++ YS G  GD +  H+GM++TT+DRD+D    NCAA+   Y GAWWY NC T+  +G  L   +  Y+       +  W  Y L+ SEMK+R
Sbjct:  123 QAQPRLVGDQEQELLDT---LADQLPRLLARAS-ELQTECMGLRKGHGTLGQGLSALQSEQGRLIQLLSESQGHMAHLVNSVSDILDALQRDRGLGRP-RNKADLQRAPARGTRPRGCATGSRPRDCLDVLLSGQQDDGVYSVFPTHYPAGFQVYCDMRTDGGGWTVFQRREDGSVNFFRGWDAYRDGFGRLTGEHWLGLKRIHALTTQAAYE-LHVDLEDFENGTAYARYGSFGVGLFSVDPEEDGYPLTVADYS-GTAGDSLLKHSGMRFTTKDRDSDHSENNCAAF---YRGAWWYRNCHTSNLNGQYLRGAHASYADGVEWSSWTGWQ-YSLKFSEMKIR 455
The following BLAST results are available for this feature:
BLAST of TCONS_00017249-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FBCD14.975e-4632.56Fibrinogen C domain-containing protein 1 OS=Homo s... [more]
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