TCONS_00014774-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00014774-protein
Unique NameTCONS_00014774-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length204

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00014774-protein ID=TCONS_00014774-protein|Name=TCONS_00014774-protein|organism=Clytia hemisphaerica|type=polypeptide|length=204bp
MKKFSTFFLINILVVYKTVNAAEDCEDWSEWSTCTKKCDGKDTKSRTRTC
VDEETGFIHDVTQRARCFDPICIEWGDWSEWASCNTNRKIICKLKGSDKA
ARGCTGKSIEVKECNDCTPVWTKWSSWSSCSASCGDRSSRFRKRICVLKY
TKYPSHKCKGESFESKDCKVPACPSWGLWGKWGSCSKTCGRDSIQSRSRN
CLFK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008269XLOC_008269Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00014774TCONS_00014774Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000884TSP1_rpt
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000884Thrombospondin type-1 (TSP1) repeatSMARTSM00209TSP1_2coord: 25..73
e-value: 0.0049
score: 26.1
coord: 176..202
e-value: 11.0
score: 0.0
coord: 75..118
e-value: 0.9
score: 9.7
coord: 121..174
e-value: 1.0E-9
score: 48.3
IPR000884Thrombospondin type-1 (TSP1) repeatGENE3D2.20.100.10coord: 174..204
e-value: 1.4E-5
score: 24.8
IPR000884Thrombospondin type-1 (TSP1) repeatGENE3D2.20.100.10coord: 71..117
e-value: 0.084
score: 12.8
coord: 118..173
e-value: 1.3E-10
score: 41.0
IPR000884Thrombospondin type-1 (TSP1) repeatPFAMPF00090TSP_1coord: 178..201
e-value: 4.3E-4
score: 20.4
coord: 123..173
e-value: 6.3E-7
score: 29.4
coord: 27..54
e-value: 7.7E-4
score: 19.5
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 22..73
score: 8.628
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 118..174
score: 11.554
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 26..54
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 173..202
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 117..173
NoneNo IPR availableGENE3D2.30.90.10coord: 24..67
e-value: 5.6E-6
score: 26.3

Blast
BLAST of TCONS_00014774-protein vs. Swiss-Prot (Human)
Match: HMCN1 (Hemicentin-1 OS=Homo sapiens GN=HMCN1 PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 2.942e-23
Identity = 60/199 (30.15%), Postives = 89/199 (44.72%), Query Frame = 0
Query:   27 DWSEWSTCTKKCDGKDTKSRTRTCVDE---------ETGFIHDVTQRAR-CFDPICIEWGDWSEWASCNTN-------RKIICKLKGSDKAARGCTGKSIEVKECNDCT-PV---WTKWSSWSSCSASCGDRSSRFRKRICVLKYTKYPSHKCKGESFESKDCKVPACPSWG---LWGKWGSCSKTCGRDSIQSRSRNC 201
            +WS W  CT+ C G+  ++RTRTC +          E   +  +    R C  P+   W  W  W +C+ +       R  +C           C G   +++ CN+   P+   W  W+SWS+CS SCG   +R R R C     +Y   KC+G   +S  C    CP+ G    W  WG+CS+TC    ++ R R C
Sbjct: 4591 EWSLWEECTRSC-GRGNQTRTRTCNNPSVQHGGRPCEGNAVEIIMCNIRPC--PVHGAWSAWQPWGTCSESCGKGTQTRARLCNNPPPAFGGSYCDGAETQMQVCNERNCPIHGKWATWASWSACSVSCGG-GARQRTRGCSDPVPQYGGRKCEGSDVQSDFCNSDPCPTHGNWSPWSGWGTCSRTCNGGQMR-RYRTC 4784          

HSP 2 Score: 91.2781 bits (225), Expect = 1.983e-21
Identity = 58/196 (29.59%), Postives = 80/196 (40.82%), Query Frame = 0
Query:   28 WSEWSTCTKKCDGKDTKSRTRTCVDEETGFIHDV-----TQRARCFD---PICIEWGDWSEWASCNTN-------RKIICKLKGSDKAARGCTGKSIEVKECN-DCTPV---WTKWSSWSSCSASCGDRSSRFRKRICVLKYTKYPSHKCKGESFESKDCKVPACP---SWGLWGKWGSCSKTCGRDSIQSRSRNC 201
            W  W TC++ C GK T++R R C +    F         TQ   C +   PI  +W  W+ W++C+ +       R   C         R C G  ++   CN D  P    W+ WS W +CS +C     R R R C           C G   + + C    CP   SWG W  W  CS +CG    ++R R C
Sbjct: 4649 WQPWGTCSESC-GKGTQTRARLCNNPPPAFGGSYCDGAETQMQVCNERNCPIHGKWATWASWSACSVSCGGGARQRTRGCSDPVPQYGGRKCEGSDVQSDFCNSDPCPTHGNWSPWSGWGTCSRTCNGGQMR-RYRTCDNPPPSNGGRACGGPDSQIQRCNTDMCPVDGSWGSWHSWSQCSASCGGGE-KTRKRLC 4841          

HSP 3 Score: 90.1225 bits (222), Expect = 5.971e-21
Identity = 56/198 (28.28%), Postives = 79/198 (39.90%), Query Frame = 0
Query:   28 WSEWSTCTKKCDGKDTKSRTRTCVD----------EETGFIHDVTQRARCFDPICIEWGDWSEWASC-------NTNRKIICKLKGSDKAARGCTGKSIEVKECN-DCTPV---WTKWSSWSSCSASCGDRSSRFRKRICVLKYTKYPSHKCKGESFESKDCKVPACP---SWGLWGKWGSCSKTCGRDSIQSRSRNC 201
            WS W  C+  C GK  + R+R C            + +       Q   C  P+   W +WS W  C       N  R   C         R C G ++E+  CN    PV   W+ W  W +CS SCG + ++ R R+C      +    C G   + + C    CP    W  W  W +CS +CG  + Q R+R C
Sbjct: 4535 WSAWRACSVTC-GKGIQKRSRLCNQPLPANGGKPCQGSDLEMRNCQNKPC--PVDGSWSEWSLWEECTRSCGRGNQTRTRTCNNPSVQHGGRPCEGNAVEIIMCNIRPCPVHGAWSAWQPWGTCSESCG-KGTQTRARLCNNPPPAFGGSYCDGAETQMQVCNERNCPIHGKWATWASWSACSVSCGGGARQ-RTRGC 4727          

HSP 4 Score: 85.5001 bits (210), Expect = 1.875e-19
Identity = 43/141 (30.50%), Postives = 69/141 (48.94%), Query Frame = 0
Query:   75 WGDWSEWASCNTN-------RKIICKLKGSDKAARGCTGKSIEVKEC-NDCTPV---WTKWSSWSSCSASCGDRSSRFRKRICVLKYTKYPSHKCKGESFESKDCKVPACP---SWGLWGKWGSCSKTCGRDSIQSRSRNC 201
            +  WS W +C+         R  +C         + C G  +E++ C N   PV   W++WS W  C+ SCG R ++ R R C     ++    C+G + E   C +  CP   +W  W  WG+CS++CG+ + Q+R+R C
Sbjct: 4532 FSQWSAWRACSVTCGKGIQKRSRLCNQPLPANGGKPCQGSDLEMRNCQNKPCPVDGSWSEWSLWEECTRSCG-RGNQTRTRTCNNPSVQHGGRPCEGNAVEIIMCNIRPCPVHGAWSAWQPWGTCSESCGKGT-QTRARLC 4670          

HSP 5 Score: 82.4185 bits (202), Expect = 2.320e-18
Identity = 52/168 (30.95%), Postives = 66/168 (39.29%), Query Frame = 0
Query:   28 WSEWSTCTKKCDGKDTKSRTRTCVD----------EETGFIHDVTQRARCFDPICIEWGDWSEWASCN-------TNRKIICKLKGSDKAARGCTGKSIEVKECN-DCTPV---WTKWSSWSSCSASCGDRSSRFRKRICVLKYTKYPSHKCKGESFESKDCKVPACP 174
            W+ WS C+  C G   + RTR C D          E +    D      C  P    W  WS W +C+         R   C         R C G   +++ CN D  PV   W  W SWS CSASCG    + RKR+C           C G++ +   C V ACP
Sbjct: 4706 WASWSACSVSCGG-GARQRTRGCSDPVPQYGGRKCEGSDVQSDFCNSDPC--PTHGNWSPWSGWGTCSRTCNGGQMRRYRTCDNPPPSNGGRACGGPDSQIQRCNTDMCPVDGSWGSWHSWSQCSASCGG-GEKTRKRLCDHPVPVKGGRPCPGDTTQVTRCNVQACP 4869          
The following BLAST results are available for this feature:
BLAST of TCONS_00014774-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HMCN12.942e-2330.15Hemicentin-1 OS=Homo sapiens GN=HMCN1 PE=1 SV=2[more]
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