Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00014774-protein ID=TCONS_00014774-protein|Name=TCONS_00014774-protein|organism=Clytia hemisphaerica|type=polypeptide|length=204bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00014774-protein vs. Swiss-Prot (Human)
Match: HMCN1 (Hemicentin-1 OS=Homo sapiens GN=HMCN1 PE=1 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 2.942e-23 Identity = 60/199 (30.15%), Postives = 89/199 (44.72%), Query Frame = 0 Query: 27 DWSEWSTCTKKCDGKDTKSRTRTCVDE---------ETGFIHDVTQRAR-CFDPICIEWGDWSEWASCNTN-------RKIICKLKGSDKAARGCTGKSIEVKECNDCT-PV---WTKWSSWSSCSASCGDRSSRFRKRICVLKYTKYPSHKCKGESFESKDCKVPACPSWG---LWGKWGSCSKTCGRDSIQSRSRNC 201 +WS W CT+ C G+ ++RTRTC + E + + R C P+ W W W +C+ + R +C C G +++ CN+ P+ W W+SWS+CS SCG +R R R C +Y KC+G +S C CP+ G W WG+CS+TC ++ R R C Sbjct: 4591 EWSLWEECTRSC-GRGNQTRTRTCNNPSVQHGGRPCEGNAVEIIMCNIRPC--PVHGAWSAWQPWGTCSESCGKGTQTRARLCNNPPPAFGGSYCDGAETQMQVCNERNCPIHGKWATWASWSACSVSCGG-GARQRTRGCSDPVPQYGGRKCEGSDVQSDFCNSDPCPTHGNWSPWSGWGTCSRTCNGGQMR-RYRTC 4784 HSP 2 Score: 91.2781 bits (225), Expect = 1.983e-21 Identity = 58/196 (29.59%), Postives = 80/196 (40.82%), Query Frame = 0 Query: 28 WSEWSTCTKKCDGKDTKSRTRTCVDEETGFIHDV-----TQRARCFD---PICIEWGDWSEWASCNTN-------RKIICKLKGSDKAARGCTGKSIEVKECN-DCTPV---WTKWSSWSSCSASCGDRSSRFRKRICVLKYTKYPSHKCKGESFESKDCKVPACP---SWGLWGKWGSCSKTCGRDSIQSRSRNC 201 W W TC++ C GK T++R R C + F TQ C + PI +W W+ W++C+ + R C R C G ++ CN D P W+ WS W +CS +C R R R C C G + + C CP SWG W W CS +CG ++R R C Sbjct: 4649 WQPWGTCSESC-GKGTQTRARLCNNPPPAFGGSYCDGAETQMQVCNERNCPIHGKWATWASWSACSVSCGGGARQRTRGCSDPVPQYGGRKCEGSDVQSDFCNSDPCPTHGNWSPWSGWGTCSRTCNGGQMR-RYRTCDNPPPSNGGRACGGPDSQIQRCNTDMCPVDGSWGSWHSWSQCSASCGGGE-KTRKRLC 4841 HSP 3 Score: 90.1225 bits (222), Expect = 5.971e-21 Identity = 56/198 (28.28%), Postives = 79/198 (39.90%), Query Frame = 0 Query: 28 WSEWSTCTKKCDGKDTKSRTRTCVD----------EETGFIHDVTQRARCFDPICIEWGDWSEWASC-------NTNRKIICKLKGSDKAARGCTGKSIEVKECN-DCTPV---WTKWSSWSSCSASCGDRSSRFRKRICVLKYTKYPSHKCKGESFESKDCKVPACP---SWGLWGKWGSCSKTCGRDSIQSRSRNC 201 WS W C+ C GK + R+R C + + Q C P+ W +WS W C N R C R C G ++E+ CN PV W+ W W +CS SCG + ++ R R+C + C G + + C CP W W W +CS +CG + Q R+R C Sbjct: 4535 WSAWRACSVTC-GKGIQKRSRLCNQPLPANGGKPCQGSDLEMRNCQNKPC--PVDGSWSEWSLWEECTRSCGRGNQTRTRTCNNPSVQHGGRPCEGNAVEIIMCNIRPCPVHGAWSAWQPWGTCSESCG-KGTQTRARLCNNPPPAFGGSYCDGAETQMQVCNERNCPIHGKWATWASWSACSVSCGGGARQ-RTRGC 4727 HSP 4 Score: 85.5001 bits (210), Expect = 1.875e-19 Identity = 43/141 (30.50%), Postives = 69/141 (48.94%), Query Frame = 0 Query: 75 WGDWSEWASCNTN-------RKIICKLKGSDKAARGCTGKSIEVKEC-NDCTPV---WTKWSSWSSCSASCGDRSSRFRKRICVLKYTKYPSHKCKGESFESKDCKVPACP---SWGLWGKWGSCSKTCGRDSIQSRSRNC 201 + WS W +C+ R +C + C G +E++ C N PV W++WS W C+ SCG R ++ R R C ++ C+G + E C + CP +W W WG+CS++CG+ + Q+R+R C Sbjct: 4532 FSQWSAWRACSVTCGKGIQKRSRLCNQPLPANGGKPCQGSDLEMRNCQNKPCPVDGSWSEWSLWEECTRSCG-RGNQTRTRTCNNPSVQHGGRPCEGNAVEIIMCNIRPCPVHGAWSAWQPWGTCSESCGKGT-QTRARLC 4670 HSP 5 Score: 82.4185 bits (202), Expect = 2.320e-18 Identity = 52/168 (30.95%), Postives = 66/168 (39.29%), Query Frame = 0 Query: 28 WSEWSTCTKKCDGKDTKSRTRTCVD----------EETGFIHDVTQRARCFDPICIEWGDWSEWASCN-------TNRKIICKLKGSDKAARGCTGKSIEVKECN-DCTPV---WTKWSSWSSCSASCGDRSSRFRKRICVLKYTKYPSHKCKGESFESKDCKVPACP 174 W+ WS C+ C G + RTR C D E + D C P W WS W +C+ R C R C G +++ CN D PV W W SWS CSASCG + RKR+C C G++ + C V ACP Sbjct: 4706 WASWSACSVSCGG-GARQRTRGCSDPVPQYGGRKCEGSDVQSDFCNSDPC--PTHGNWSPWSGWGTCSRTCNGGQMRRYRTCDNPPPSNGGRACGGPDSQIQRCNTDMCPVDGSWGSWHSWSQCSASCGG-GEKTRKRLCDHPVPVKGGRPCPGDTTQVTRCNVQACP 4869 The following BLAST results are available for this feature:
BLAST of TCONS_00014774-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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