TCONS_00013123-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00013123-protein
Unique NameTCONS_00013123-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length417

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00013123-protein ID=TCONS_00013123-protein|Name=TCONS_00013123-protein|organism=Clytia hemisphaerica|type=polypeptide|length=417bp
MDKIKLQKLPIPILCMIASLLPTSDVLNFRLVCKIFYEVTLCREVLKQIK
VKARNRSYKPFKKFLTESLSGGRFIHLDLFLATGATIANILNLTPNVNNL
IINIKDIKCFKSQKLDYLHALVLVDKDLMYFDKIPESKYSKYFQPLSELS
SVKDLSLKCQGQSYKSNLIQIIIKSLKNVRKIHLESLIVNNSAHFDEFKD
FLSSCRTITSWSFFDVRLVKKGVRLPETVTNYECTKCIFSLIDKQHCSLQ
RLKLASLVPYVDKIWKENSFRDLRYLELQNCFFYFNPLESCKKLHTLKLL
RCHLPFYYLMKLSTNVKDNLKELTIQSHKDFKDEMLLEVLNSFKSLTRLT
LINMNLLTPSFLTKIKLSKLKFIFIKDSLNFNTREFRDHIETMKNELSFT
VVLVNDSKNVKSSILKL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007331XLOC_007331Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00013123TCONS_00013123Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001810F-box_dom
IPR032675L_dom-like
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainPFAMPF00646F-boxcoord: 5..38
e-value: 5.7E-6
score: 26.0
IPR001810F-box domainPROSITEPS50181FBOXcoord: 3..49
score: 10.027
IPR001810F-box domainSUPERFAMILY81383F-box domaincoord: 6..49
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 241..411
e-value: 1.5E-7
score: 30.0
coord: 1..240
e-value: 1.9E-9
score: 36.3
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 139..378

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00013123-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top