Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00011547-protein ID=TCONS_00011547-protein|Name=TCONS_00011547-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1468bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00011547-protein vs. Swiss-Prot (Human)
Match: RECQ4 (ATP-dependent DNA helicase Q4 OS=Homo sapiens GN=RECQL4 PE=1 SV=1) HSP 1 Score: 436.802 bits (1122), Expect = 5.014e-131 Identity = 241/583 (41.34%), Postives = 330/583 (56.60%), Query Frame = 0 Query: 402 NFVKIDLRKKTYVRGIKKISASTQKRRAWKAKTSFEQPSKFGKKICFKCGGEGHWAKFCRGRPKQVDLFKRLDEEKLSLEYRSLAEQNGSCF-DQLYGNADENAPSLLENAKKFTIDDVLDIKPCWPRTPYITDCQPKPVEPLIQPECDQ-----PSQNAYK---EAKKALKNFGFNSFREGQHEATARILSGLSTLVILATGSGKSLCYQLPAYMYYNERKWLTLVVSPLVALMQDQVAGLPDCLPGAALNSNMTKLQQQKVVTKLKEGKIAILLVSPEALVSGGFGTGILPPKSSLPPIGFACIDEAHCLSEWSHNFRPSYLKVCKVLRERYQIGCLLGLTATASNKTAKSVIQHLGVPDEGSIIRDPSPIPDNLQLTASRDERRDIALVELLHNEPFVKCDSIIVYVTRRMDCDRLAVLLRTSLPEFVRDEKSEGEEEERNKVKKKKVIKTRTRKKDMDKPTWWNCEAYHAGLSPAQRKRVQNQFMAGDLRIVVATVAFGMGLDKSDVRSVIHYNMPKSFENYVQEIGRAGRDGKPSFCHVFLEDEVTDLCELKRHIYGDTVDRSAITRFVDLLFPVCDC 975 N+V++++++K YVRG + + + +++AWK K K CF GG + SCF ++ + + P + + +D + P P + QP P P + P PS + E +AL+ G +FR GQ A RILSG+STL++L TG+GKSLCYQLPA +Y LTLVVSPL++LM DQV+GLP CL A ++S MT+ Q++ V+ K++ ++ +L+++PEALV G G LPP + LPP+ FACIDEAHCLS+WSHNFRP YL+VCKVLRER + C LGLTATA+ +TA V QHL V +E + P+P+P NL L+ S D D AL+ LL + F DSII+Y RR D +R+A LLRT L V + R EAYHAG+ +R+RVQ FM G LR+VVATVAFGMGLD+ DVR+V+H +P SFE+YVQ +GRAGRDG+P+ CH+FL+ + DL EL+RH++ D+ D A+ R V +FP C C Sbjct: 352 NYVRLNMKQKHYVRG-RALRSRLLRKQAWKQKWR-------KKGECFGGGG-------------------------------ATVTTKESCFLNEQFDHWAAQCP------RPASEEDTDAVGP----EPLVPSPQPVPEVPSLDPTVLPLYSLGPSGQLAETPAEVFQALEQLGHQAFRPGQERAVMRILSGISTLLVLPTGAGKSLCYQLPALLYSRRSPCLTLVVSPLLSLMDDQVSGLPPCLKAACIHSGMTRKQRESVLQKIRAAQVHVLMLTPEALV----GAGGLPPAAQLPPVAFACIDEAHCLSQWSHNFRPCYLRVCKVLRERMGVHCFLGLTATATRRTASDVAQHLAVAEEPD-LHGPAPVPTNLHLSVSMDRDTDQALLTLLQGKRFQNLDSIIIYCNRREDTERIAALLRTCL-------------------HAAWVPGSGGRAPKT------TAEAYHAGMCSRERRRVQRAFMQGQLRVVVATVAFGMGLDRPDVRAVLHLGLPPSFESYVQAVGRAGRDGQPAHCHLFLQPQGEDLRELRRHVHADSTDFLAVKRLVQRVFPACTC 855 HSP 2 Score: 182.185 bits (461), Expect = 2.855e-46 Identity = 108/324 (33.33%), Postives = 166/324 (51.23%), Query Frame = 0 Query: 1153 VCSGHRRSISSDRLINDLDMREEVISTFLAYLELHPKTWLRMLNPLRATCIIKCYGGPEQFQMMAKKFPPVALALRYLLPQDELTNLHERRQLEFDFVEVADLMCWDVLTVLRELKALQWNMSFALDSRLNTTGKSGIIVQTENLSFHFTTASNVDDDGRDEIIGFIHQTVLNQEETRLLQL----DALYCVLKELSCKTYEQIPADRRIDVKARQQIGQFFLCKEEQQKPFLRELITDDLKIDTPQRR---W-NNIASDIRSLVNSYPDSQFNGRAIARIFQGIDSPRFPALGYGRDRRFWRQYLDVDFNELRKFAIRELMRT 1468 VC GH R++ + LDM EE I T L YLELHP WL +L C + C GGP Q Q +A + PP+A+ L LP+D +EFD V++ D M W++ +V R L LQW+ + R +G++V+ L+FH + ++ + +D+I F++ V +E L +L A + V EQ D + + +G++F +E Q+ + D + Q R W + + DIR ++ P+ +F+ RA+ARIF GI SP +PA YG+DRRFWR+YL + F+ L A EL++ Sbjct: 896 VCMGHERALPIQLTVQALDMPEEAIETLLCYLELHPHHWLELLATTYTHCRLNCPGGPAQLQALAHRCPPLAVCLAQQLPEDPGQG---SSSVEFDMVKLVDSMGWELASVRRALCQLQWDH----EPRTGVRRGTGVLVEFSELAFHLRSPGDLTAEEKDQICDFLYGRVQARERQALARLRRTFQAFHSVAFPSCGPCLEQ--QDEERSTRLKDLLGRYFEEEEGQEP----GGMEDAQGPEPGQARLQDWEDQVRCDIRQFLSLRPEEKFSSRAVARIFHGIGSPCYPAQVYGQDRRFWRKYLHLSFHALVGLATEELLQV 1206 The following BLAST results are available for this feature:
BLAST of TCONS_00011547-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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