TCONS_00011373-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00011373-protein
Unique NameTCONS_00011373-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length494

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00011373-protein ID=TCONS_00011373-protein|Name=TCONS_00011373-protein|organism=Clytia hemisphaerica|type=polypeptide|length=494bp
MAMIFRRPQYVFRTANAISAPRQMSSTSAVEDGDYTGPVMKTSMPGPHSQ
QKMQEMVGMNASLAAVPFFVDYDKCQGNYIVDADGNVLLDAFSQISSLPL
GYNHPALTKAVHSRNVTNYLVNRPAMGILPPVDTKQLLDNTLLRVKPTGL
NYVQTMMCGSCGVENAFKAAMIKYRADQRGEDLPTDIELDTCMRSEKPGT
PDLTVLSFKTAFHGRTFGSLSATRSKGIHRVDIPLHDWPVADFPLLKYPL
EEHEAENREIEDRAIESAREQILKYNAAGKHVAAAIVEPIQAEGGDNFAT
PYFFKELQKLCKELKVAFIVDEVQTGGGPSGKFWAHEHWDLPEAPDMVTF
AKKLLIGGYYYKEEFLPKQAYRIFNTWMGDPARNALLETVLDTIDEDKLL
ERTQSAGNVLMNGLSMLENKYPDLIHDTRGLGTFLAVSCKTTETRDKLST
TLRNLGLNNGGCGAASIRLRPALIFNDSHANATLEILEDALKKI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006376XLOC_006376Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00011373TCONS_00011373Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005814Aminotrans_3
IPR015422PyrdxlP-dep_Trfase_sub2
IPR0046314NH2But_aminotransferase_euk
IPR015421PyrdxlP-dep_Trfase_major_sub1
IPR015424PyrdxlP-dep_Trfase
Vocabulary: Molecular Function
TermDefinition
GO:0008483transaminase activity
GO:0030170pyridoxal phosphate binding
GO:0003824catalytic activity
GO:00038674-aminobutyrate transaminase activity
Vocabulary: Biological Process
TermDefinition
GO:0009448gamma-aminobutyric acid metabolic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009448 gamma-aminobutyric acid metabolic process
molecular_function GO:0003867 4-aminobutyrate transaminase activity
molecular_function GO:0003824 catalytic activity
molecular_function GO:0030170 pyridoxal phosphate binding
molecular_function GO:0008483 transaminase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 250..270
NoneNo IPR availableCOILSCoilCoilcoord: 484..494
IPR005814Aminotransferase class-IIIPIRSFPIRSF000521Transaminase_4ab_Lys_Orncoord: 12..494
e-value: 4.4E-180
score: 596.5
IPR005814Aminotransferase class-IIIPFAMPF00202Aminotran_3coord: 66..491
e-value: 7.2E-103
score: 344.3
IPR005814Aminotransferase class-IIICDDcd00610OAT_likecoord: 50..491
e-value: 1.59496E-98
score: 304.491
IPR015422Pyridoxal phosphate-dependent transferase, subdomain 2GENE3D3.90.1150.10coord: 389..494
e-value: 2.1E-13
score: 49.9
IPR015422Pyridoxal phosphate-dependent transferase, subdomain 2GENE3D3.90.1150.10coord: 48..107
e-value: 4.4E-6
score: 26.3
IPR0046314-aminobutyrate aminotransferase, eukaryoticTIGRFAMTIGR00699TIGR00699coord: 33..490
e-value: 9.7E-172
score: 569.8
IPR015421Pyridoxal phosphate-dependent transferase, major region, subdomain 1GENE3D3.40.640.10coord: 108..388
e-value: 1.9E-55
score: 187.7
IPR015424Pyridoxal phosphate-dependent transferaseSUPERFAMILY53383PLP-dependent transferasescoord: 61..493

Blast
[Close]
BLAST of TCONS_00011373-protein vs. Swiss-Prot (Human)
Match: GABT (4-aminobutyrate aminotransferase, mitochondrial OS=Homo sapiens GN=ABAT PE=1 SV=3)

HSP 1 Score: 479.945 bits (1234), Expect = 1.426e-166
Identity = 232/477 (48.64%), Postives = 313/477 (65.62%), Query Frame = 0 
Query:   18 ISAPRQMSSTSAVED--GDYTGPVMKTSMPGPHSQQKMQEM-VGMNASLAAVPFFVDYDKCQGNYIVDADGNVLLDAFSQISSLPLGYNHPALTKAVHSRNVTNYLVNRPAMGILPPVDTKQLLDNTLLRVKPTGLNYVQTMMCGSCGVENAFKAAMIKYRADQRGEDLPTDIELDTCMRSEKPGTPDLTVLSFKTAFHGRTFGSLSATRSKGIHRVDIPLHDWPVADFPLLKYPLEEHEAENREIEDRAIESAREQILKYNAAGKHVAAAIVEPIQAEGGDNFATPYFFKELQKLCKELKVAFIVDEVQTGGGPSGKFWAHEHWDLPEAPDMVTFAKKLLIGGYYYKEEFLPKQAYRIFNTWMGDPARNALLETVLDTIDEDKLLERTQSAGNVLMNGLSMLENKYPDLIHDTRGLGTFLAVSCKTTETRDKLSTTLRNLGLNNGGCGAASIRLRPALIFNDSHANATLEILEDAL 491
            +   R +S  +A  D   DY GP+MKT +PGP SQ+ M+++ +  NA   AV FF +Y++ +GNY+VD DGN +LD +SQISS+P+GY+HPAL K +      +  VNRPA+GILPP +  + L  +LL V P G++ + TM CGSC  ENA K   + YR+ +RG+   +  EL+TCM ++ PG PD ++LSF  AFHGRT G L+ T SK IH++DIP  DWP+A FP LKYPLEE   EN++ E R +E   + I+KY    K VA  IVEPIQ+EGGDN A+  FF++L+ + ++   AF+VDEVQTGGG +GKFWAHEHW L +  D++TF+KK++ GG+++KEEF P   YRIFNTW+GDP++N LL  V++ I  + LL     AG  L+ GL  L+ +YP  I   RG GTF +        R+KL    RN G+  GGCG  SIR RP L+F D HA+  L I  D L
Sbjct:   22 VPGSRHISQAAAKVDVEFDYDGPLMKTEVPGPRSQELMKQLNIIQNAE--AVHFFCNYEESRGNYLVDVDGNRMLDLYSQISSVPIGYSHPALLKLIQQPQNASMFVNRPALGILPPENFVEKLRQSLLSVAPKGMSQLITMACGSCSNENALKTIFMWYRSKERGQRGFSQEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDIARKHGCAFLVDEVQTGGGCTGKFWAHEHWGLDDPADVMTFSKKMMTGGFFHKEEFRPNAPYRIFNTWLGDPSKNLLLAEVINIIKREDLLNNAAHAGKALLTGLLDLQARYPQFISRVRGRGTFCSFDTPDDSIRNKLILIARNKGVVLGGCGDKSIRFRPTLVFRDHHAHLFLNIFSDIL 496
The following BLAST results are available for this feature:
BLAST of TCONS_00011373-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GABT1.426e-16648.644-aminobutyrate aminotransferase, mitochondrial OS... [more]
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