TCONS_00010090-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00010090-protein
Unique NameTCONS_00010090-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length302

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00010090-protein ID=TCONS_00010090-protein|Name=TCONS_00010090-protein|organism=Clytia hemisphaerica|type=polypeptide|length=302bp
MMNKSLISDDVESDSLTSTYEHFDPIDEDHQISPIRPEINTEKHRLHKDN
SIDSQCSSHGTVRRSHSPELHKYEEFSNKIKLQCPTCKGKGKLTQGQADS
MVALIPVRDKRLKPRKTKLYLGITFVVCMIVTFLVTFFLLPRSVSIEIIG
TDTKHIYMPDSLKTVPYIDVAVTFSIKNDNFFKADISNIKQDISWNRFIL
NSSVLDGNKPFQVNGRTQQNHTILTRQIFQGDVNIKVKRVCAFGWNWSLL
EMFVNTATVSYLYRSEQISDTNYEYVICMNQTAYTMSGRKRRSNTSLQPL
NL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005658XLOC_005658Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00010090TCONS_00010090Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009790DUF1356_TMEM106
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009790Protein of unknown function DUF1356, TMEM106PFAMPF07092DUF1356coord: 67..282
e-value: 1.6E-35
score: 122.3
NoneNo IPR availableGENE3D2.10.230.10coord: 42..101
e-value: 0.0014
score: 18.3

Blast
[Close]
BLAST of TCONS_00010090-protein vs. Swiss-Prot (Human)
Match: T106B (Transmembrane protein 106B OS=Homo sapiens GN=TMEM106B PE=1 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 7.806e-29
Identity = 72/235 (30.64%), Postives = 127/235 (54.04%), Query Frame = 0 
Query:   73 YEEFSNKIKLQCPTCKGKGKLTQGQADSMVALIPVRDKRLKPRKTKLYLGITFVVCMIVTFLVTFFLLPRSVSIEIIGTDTKHIYMPDSLKTVPYIDVAVTFSIKNDNFFKADISNIKQDISWNRFILNSSVLDG---NKPFQVNGRTQQNHTILTRQI-----FQGDVNIKVKRVCAFGWNWSLLEMFVNTATVSYLYRSEQISDTNYEYVICMNQTAYTMSGRKRRSNTSLQP 299
            Y EF+ +  + CPTC+G G++ +GQ + +VALIP  D+RL+PR+TKLY+  +  VC++++ L  FFL PRS+ ++ IG  + ++   D  K   Y+++  T +I N+N++  ++ NI   + +++ ++  + L+      P  +        T++  ++     F   ++IKV          +++ M   T T +Y   SEQIS   Y+YV C   T Y + G+    N  LQP
Sbjct:   50 YVEFTGRDSVTCPTCQGTGRIPRGQENQLVALIPYSDQRLRPRRTKLYVMASVFVCLLLSGLAVFFLFPRSIDVKYIGVKSAYVSY-DVQKRTIYLNITNTLNITNNNYYSVEVENITAQVQFSKTVIGKARLNNITIIGPLDMKQIDYTVPTVIAEEMSYMYDFCTLISIKVH---------NIVLMMQVTVTTTYFGHSEQISQERYQYVDCGRNTTYQL-GQSEYLNV-LQP 272
The following BLAST results are available for this feature:
BLAST of TCONS_00010090-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
T106B7.806e-2930.64Transmembrane protein 106B OS=Homo sapiens GN=TMEM... [more]
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