TCONS_00010090 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00010090
Unique Name	TCONS_00010090
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2258

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000102:52901..62123-
coding sequence from alignment at sc0000102:52901..62123-

transcript sequence

>TCONS_00010090 ID=TCONS_00010090|Name=TCONS_00010090|organism=Clytia hemisphaerica|type=transcript|length=2258bp
AATGTTCTTTCACTAGGCTCAAATCACTGGATAAATCTGTTTTGGTCGTT
CTGATAAGATGTCATTTTCGAAGGAGTTTGTTTAACACGTGGTTTTAATT
TTGCAgagttttaataattttttgaatCAGTAGTAAGTCACATCTTGAGA
TATTTAACCTACTACAGAGTATTGTACATTGGTGCATCGCCACTTGGATT
CTGCACCAATCAAACCATTCTATAAGAACTATTACTTTATTACTGACAAT
CGACGTTGATTGGCGATATAAAACCCAACACAAAAATGATGAACAAAAGT
TTAATATCAGACGATGTTGAAAGCGACTCTTTAACATCAACTTATGAACA
TTTCGATCCTATTGATGAAGATCACCAAATAAGTCCAATACGTCCTGAGA
TAAATACAGAGAAGCATCGATTACATAAAGACAATAGTATCGACAGTCAA
TGCTCAAGTCATGGTACTGTCAGACGCTCGCACTCTCCCGAACTGCATAA
ATATGAAGAATTCTCGAATAAAATTAAACTGCAATGCCCGACCTGTAAAG
GCAAAGGAAAATTAACTCAAGgaCAAGCAGATAGTATGGTGGCACTAATA
CCCGTTCGTGATAAAAGACTAAAACCAAGAAAAACGAAGTTATATCTGGG
CATCACGTTTGTTGTTTGTATGATCGTCACTTTCCTGGTCACATTCTTCC
TGTTGCCACGTTCAGTATCCATTGAGATCATTGGCACTGATACCAAACAT
ATTTACATGCCAGACAGTCTCAAGACTGTACCTTACATTGACGTAGCTGT
CACATTCTCAATTAAGAACGATAATTTCTTCAAAGCTGACATTTCGAACA
TAAAGCAGGATATCAGTTGGAATCGTTTCATATTGAACTCGTCAGTTCTT
GATGGCAACAAACCTTTCCAAGTCAATGGAAGGACGCAACAAAATCATAC
GATATTAACACGGCAGATATTCCAAGGTGATGTCAATATCAAAGTCAAAC
GTGTTTGTGCATTTGGTTGGAATTGGTCGCTGCTTGAAATGTTCGTGAAC
ACGGCGACGGTCTCCTATTTATATCGAAGTGAACAGATATCGGACACGAA
CTATGAATACGTTATATGTATGAACCAAACTGCTTATACGATGAGTGGAA
GGAAAAGACGATCTAATACATCATTACAGCCCTTAAATCTATAACATTAG
ATTGGCTAACTACGGTATGAGTTTTAAACCAATCAAAGCAAAGGATCAAG
ATAAATTTCAAAGTATGGATGATaaagaattgaaatttgaaTACAGTGTA
GCTAAATATCAATACCAATGCGCTTGTAACGATTTATGGAAACAAAAAAC
CACGCTCAAAAGACTAAAAATGGTTGAAGAAATTCGCAAAGAATCAAAAC
CCAACAATAATTTGGTTGGTAGCGTCAATTTAACGAAAGATGTGGAACAG
AGAAAAGCTTTGAATCAAGAGCTTGTCACCTTGCAACAAAGACTTAGAAA
CTTGAATTCAGAGTTGAAAGGATTAGTTCGTCAACGTAATGCAATACAAG
accgaaatttcaaaatggaggaccaaattgatcaaattttaGCTAGTAAA
ATTAGAGCTAGTAAAAATCGCTCGAAATCTGTACCCGATGATATTAAAAA
ATCACATTCTGATCCAAACATCTTTTTAACCAGCTCCTTAGGAACCTCAC
CTACTAGTCTAGGAGTACCAAAACCAAGAGCTAGGCTAGGATCTGCTTTG
ACAGCAAACAGGAAGGTGCAATTTCCTTCTATAAAGACaacaatgaaatt
gaaaatgaacttAATGGTGTTGAAAAAGAAAGCGCAAATGAAAATTGAGG
ACCGGAAAAATGGGGAGGACGTAAAGAATGATTTTCTACCGTTCCCTAAG
TTATCAACGCGTGGTTCGAGCAGGTTCAACCAGAGAAGAGGTTCTTGTAG
AATCTGAGGTTATTGCTGAAAATACTGCCATGTTGGATTTATTATAGTGT
GAAATGGTGGGATTGAAACGCGCAAGATTGCAGATTGAtgaatattttat
tattttaaaaatcatattttgtaATTTACGCCAGTTGATTTTTAAGCAAC
TAAAATACTAGCAGtttcataaaatcaaaatgtcaaCATAAAAGACTATA
GTTTCGCATTTGGTCTACCAATAGTTGGTTGGTTTCCAAAGGGACATCAT
AGATAAAGACTTTTTAACTTGTACGGTgatgaatttgaattttaaagttG
TACTGTAA

Run BLAST on NCBI

protein sequence of TCONS_00010090-protein

>TCONS_00010090-protein ID=TCONS_00010090-protein|Name=TCONS_00010090-protein|organism=Clytia hemisphaerica|type=polypeptide|length=302bp
MMNKSLISDDVESDSLTSTYEHFDPIDEDHQISPIRPEINTEKHRLHKDN
SIDSQCSSHGTVRRSHSPELHKYEEFSNKIKLQCPTCKGKGKLTQGQADS
MVALIPVRDKRLKPRKTKLYLGITFVVCMIVTFLVTFFLLPRSVSIEIIG
TDTKHIYMPDSLKTVPYIDVAVTFSIKNDNFFKADISNIKQDISWNRFIL
NSSVLDGNKPFQVNGRTQQNHTILTRQIFQGDVNIKVKRVCAFGWNWSLL
EMFVNTATVSYLYRSEQISDTNYEYVICMNQTAYTMSGRKRRSNTSLQPL
NL

Run BLAST on NCBI

transcript from alignment at sc0000102:52901..62123-

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00010090 ID=TCONS_00010090|Name=TCONS_00010090|organism=Clytia hemisphaerica|type=transcript|length=9223bp|location=Sequence derived from alignment at sc0000102:52901..62123- (Clytia hemisphaerica)
AATGTTCTTTCACTAGGCTCAAATCACTGGATAAATCTGTTTTGGTCGTT
CTGATAAGATGTCATTTTCGAAGGAGTTTGTTTAACACGTGGTTTTAATT
TTGCAGAGTTTTAATAATTTTTTGAATCAGTAGTAAGTCACATCTTGAGA
TATTTAACCTACTACAGAGTATTGTACATTGGTGCATCGCCACTTGGATT
CTGCACCAATCAAACCATTCTATAAGAACTATTACTTTATTACTGACAAT
CGACGTTGATTGGCGATATAAAACCCAACACAAAAATGATGAACAAAAGT
TTAATATCAGACGATGTTGAAAGCGACTCTTTAACATCAACTTATGAACA
TTTCGATCCTATTGATGAAGATCACCAAATAAGTCCAATACGTCCTGAGA
TAAATACAGAGAAGCATCGATTACATAAAGACAATAGTATCGACAGTCAA
TGCTCAAGTCATGGTACTGTCAGACGCTCGCACTCTCCCGAACTGCATAA
ATATGAAGAATTCTCGAATAAAATTAAACTGCAATGCCCGACCTGTAAAG
GCAAAGGAAAATTAACTCAAGGTACATACTTGGACATTTTATTTTTTGCT
AAGACCCTTTTTTGGTTCGTGAATACAGTACAGAGTTTTTCAGGAGAGGC
TTTCAGTATTTTTCTGTAATTCAATCAAAAAGATTTTCTTATGTTTTTGA
CAGCGTTTTTCCCCCAACGTTTTTGAATTGATTATTCAACTGGCATTGCG
AAGTCTCAAACATTCGGAAATAAGCTTGAACATATTTTTGGAAACCTATG
TACCTTTATCATCCTTTTTAAGCTTTTATCGATATACCTACAGCCTTAAC
ATGTAGCCCTAAGCAATGCGAAACTGAATTTGAGATCATTTTTAAATCAA
TTTTTTTTACAGGACAAGCAGATAGTATGGTGGCACTAATACCCGTTCGT
GATAAAAGACTAAAACCAAGAAAAACGTATGTTCTTCAAAATTCTGCATT
CTTCAATAAAAAAATTTATGATATGCACCATTGCAATGTCTTCTGACATT
ACATCACGTACCCATTAGCTGATTCGTTGTAAGTGACGTAAATCAGTCAA
TTCGTCACTTTCAACCAATCAGCTGTTGGGTCCGGGGAAGACATTGCAAT
GGTGCATATCATGAATAATGGGCTTTTCCAGGAATTTTCCGTACCCCTCC
CTGTTGAGGATATCCATTGTTGGAGTTCCACAGTCCCCTGGATGTCTAGC
TTTAAAAAAATACCCCCTGGATATCCGACATGAAAAAGTGGATAGAAGGT
TTGAGGATATCCATGTATTTTGTCCTGTACCCCCTGGATTTTCAATCATT
TTATTCTGTCCACCCTGGATATCCAGGTATTCTGTCCAATACCCCTCTGA
ATATCCAGGCATCAAATTGGTATTCAAATTGTCTTCACTCGTTCTAATAA
CTTTCTAATAATTTTGAAAATTAATACCAATTAGGAGACGCCTTTAAATT
GCTGTTGTATTACTGAAATACATTTTTGTTTACATTAACATCACCTTAAA
AAAAATTATAGCAAATCACTCACTTAAAAAAATAATACACTTATGATAAA
TTCAAGTCTTTAACCACACAACTTCAAAATATAATGATGGTTTTTCCTTT
AAGTTTTTCTTTTATTTCATAGCTTAGTATTAACCCTGGCGATATCACTT
GGTGCCTTGCGGGGGGGGGAGAGCTCTCTAATTTTCTATGTTCGGTTTGT
AAGAAGTATATGTTCGTAAGTGTAATGTACAGTAGTTTCTCAAATTATAA
AGAAAAAAAACACTTCAACTTCGTTTTATAGGAAGTTATATCTGGGCATC
ACGTTTGTTGTTTGTATGATCGTCACTTTCCTGGTCACATTCTTCCTGTT
GCCACGTTCAGTATCCATTGAGATCATTGGCACTGATACCAAACATATTT
ACATGCCAGACAGTCTCAAGACTGTACCTTACATTGACGTAGCTGTAAGA
TTTATTTTTGAAAGATAATTTTCATCGGTAGCAAGGGTAGGTTTTAAGGC
CGGTATCCACTTTCGCGCAAAATAGGCGGCAGTTTTTTCTCAATCTCTTT
TGCCTAAAGAAAAGATTACGTCATAAAAAGGTTTCGCGCGAACAAAAAAA
ATTTGAAGGAAGCTCAACTTTTTTCAACCGTTATGTCAATTTTGACCAAT
GGAATTGCTTCATTTTTCAACCGACCAATGACTTTAAAAATGTGAAAAAG
TTTTCGCTCATTTCGCCTTTAATAAAAATTAGAAAAGGAAAGTTTAATAA
GTGTCCATTCAAGAACTCTATCTAACAAAAAGATAAGTTCGGTAATGAAA
AAAGCTCTTTTTTTTTGCTTGAAAACTTGTTGGGTAAAAAAAGAGGACTA
GCACTTAGATCAGTCATGTAATCTTCTAATACTTCAGGCGTACAAACTTT
CACGAGCAGAAACTCGCGATTTTCACGAAAATATATGTTCGCGAAAGTTT
GTACACCTAAAGTAGCCTATATATCTACCTATGTTTAAACAATTCTCATG
TTTGTTTCAGTTCTTTTGAAAACTTTCGTTTTATTATTGATCAGGTCACA
TTCTCAATTAAGAACGATAATTTCTTCAAAGCTGACATTTCGAACATAAA
GCAGGATATCAGTTGGAATCGTTTCATATTGAACTCGTCAGTTCTTGATG
GCAACAAACCTTTCCAAGTCAATGGAAGGACGCAACAAAATGTGAGTAAA
TTATATAAACGCAGGTTCATTTTGAAACAGTTTCCCTAAAATTTAGACGA
ATAGTAGACGATTCCCCTTTTTTAAGTAAGTAGGTGAGTTTGCGACCGCA
GTCGGAGGCGACCTGAAGGCTCCTTTTTCGATAGCTGTCCACTCGAAGGT
AGGGGTGGGCGCCACTCTTTCTCCCTATATTTACTCCATTTACTCTTGAT
CCGTCTCTTTAATTGCTGAGCATCAAGCAGATAGGCATCAAGTACCATAT
TGGGAATCTTTGGTATGACCCGGCTGGGGAACGAACCCACAACCTTGCGC
ACCGTAGCTGTATGATCAACATTCATGCTACGGCCGCTTTCTTTAGTGAT
TTCACAAACATCAAAAACACATTAAGATTCACATTTCTTAACTTCTTACA
TAGCCTTTTAGTCCCCTAATATTCGGAGAGGGATTACAACTAGATGTGCT
TCATAAGATTTCAACATTTTATTCCATTTCATCTACAGCATACGATATTA
ACACGGCAGATATTCCAAGGTGATGTCAATATCAAAGTCAAGTAAGTGTA
ATTTTTAAGTATTGAATTTAAAAATAATGTTTTCTACGGAAATAACCCGG
TTGTAGCCAGTAGTGGCAAATTTAAACTAGATAAAAGTTGTACAAAATTT
GCCATTTGTGTTTCTGTAGAAAACATTACGTCATTAATATCATGAATTAT
TACTTTCACTGTTCAGTTTTAATTCGTCTTTAATTATTGTTTAACACTGC
TTCGTCTGTCTGAGACTGCTAAATGATAAAAGTGGATGTCTTTGTGCATG
CTTTTTTTATAAGAATATCTTCTATGAGAATATCAGCGTGAAAATTGGCC
AAATCGTAAGAATACCCTAAGAATACCCTCTAGTAGGGTGAGGCTCACAG
ATTTTGATAAGAATATAGTCATTTTGTATTTGGTTAACAGAAAAAGCTGG
TTCTTTTGTTAGACTTAAATTGAAACTTTTGGGCAGAATAATAATTTTAG
CTCCCAATGTTTACTCAAAAGTCTCAAACTCCCAAATTGATCATTGTTTG
TGTAAAAGTCAAGTCTGAAAAAGTAAGGCTACGTTTAAGAATATTTCACC
CTCAATTTTGGTAATTTCTTAAGATTACTTGACCCTCATCCAAAGTACAA
TATTCTTTTAAAAAAAGCGTGTACATCTAAAGCAGAAATTTTGCCACTTA
TCAAACCTTACCCCCCCCTCCTTGAAAAAGACCTCCTCAACAGGGAGTAT
TCGGTTGTTGTTTTTCTGGAAAAGCCCAATGCATAAAAATCGAGAACTAA
AGACCTAATGTCGCAACCAAGCACACCAAGTGTGGTGCACACCAGTTAAA
AAGCATTATTTTTGAAAATTATTCATCTCTTTTTTTCTTGAAGACGTGTT
TGTGCATTTGGTTGGAATTGGTCGCTGCTTGAAATGTTCGTGTAAGTATT
TTGTATTTTTATTGCGTCATTTATATTTCGTAATTTTAATTTCGTTTCCA
CCAAAAAAAAATTCTGTATACTATCCGCTGCAATCTGTGTTGACGATTTT
TAAAGCTTTTTTCACATGCACGTAAAATTTTACTTAAGACCTTGAAGGGT
GGGGAATTTCCCTAAGCTTACGTAGTGTTTTAAGGCCTTATGTAGAGTTT
GTTTACGTTCAAAAAGTTTTGAATCATTTTAATCAACAAAAACTCTACAT
TATGTCGGGGAAATTCCCAAAAGACAGCCTTACGAACGATTTTCCGTAAG
GTCCAAAGTGAAATTTTACACATATTTTCCTTCAGAGTTAAATATTTTAC
TAATTTACCTTTCAGGAACACGGCGACGGTCTCCTATTTATATCGAAGTG
AACAGATATCGGACACGAACTATGAATACGTTATATGTATGAACCAAACT
GCTTATACGATGAGTGGAAGGAAAAGACGATCTAATACATCATTACAGCC
CTTAAATCTATAACATTAGATTGGCTAACGCAAGAGTTATTTGTAAAAAT
TCTACCTTATCGGGGAAAACTTCGTCGGGGAAAAGTGACGAAATTTTGGC
CAAGTGGGGAATATTTTTCCCCGACGAAAATTTTCCCCGGCCTTAATGCG
CTTACCAACTACCAGCAAGTGACGAATATTTTTCCCCGACGAAAATTTTT
CCCGACGAAGTTTTCCCCGATAAGGTATTCACTTATTTGTTGGAGACGAT
GTAACTTTATTGGGACGATGTGAAGAATACGTCTCTGGTCTCTACGATTT
GTGAGAACCGATCGTGTTTTTCTAACGATCCTCTTGCACATGTTGCTTAA
CAAAAAATCGAAGTAAATACAATCGCCATAAGCTGATGATGTTTGTAGAA
TCTCTCTGTCTAATAGCTTGAAACCTCAGCGTTTATGAACAAAAAATTTT
TGGGCTTTTCCATATTAGTTAAGTATTGGCTTTCTTGGACCCTTTAAGAT
TGTCCACATTGATGTCGAACAAACTTTGAAGCGTTAAGGCTTGGGGACAC
GAGAAGTTTTTTTCGCGTTGGTGCAATGCAACATGCTCTTGCAGTTGGTG
GGATCAACACAAGAAAAAAAGTTCGTGTCCCATGGTTTCTTTTTTTGTTT
CATGGGACAGGGAAATACCTAAAAGACATGTGAGATTTCACTTTTGTTGG
TAGAAAGAAAAATGGGGTGGAGACCACAGATATCTGTAAAGCCCGAAGGG
CTAGATTTGCGGCTTTTATCGAAAAGTGAAGCCTAGGTTTGGAAGGATTT
CCTACCAAAGTCACGTGACTANNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNCGGCACGAAATTTAAAAAGTCAAATTTTTGCTTCATTTTTT
TTTGCTGGAGAAAGCTTAAAGTTGCCTATCTAGCCCTTCGGGCTTAGATA
TCTGTGGTAGAGACACGAGAAAGCGTTTCAGGTTGTTGGGATGGAGCATG
TTGCATTGCACCAACGCGGAAAAAACTTCTCGTGTCCCCAAGCCTTTACA
ATTGTCATTATATTATTGACATCATTTAGCATCAGTTCTCAATTGTTTTG
ATTGTAAGTTATATTACATAAAAATTTTCATTTTTATTCCCGTATTATGC
AAAACTTTTGTCGCTGATATTGATCGACTAACAACTGACTGCTACTCACA
TTAACATGTTGCAATACACAAACTCTAACTCTTATCGGATTAATTTTTGT
GAGATTTAATTTCGCGAATGAAACCTAAAATCAGCTGAGAGCAATCCCGA
AACTGTCAATTTTCGACTGATTTCGTTCTGATAATATGAATTAGAAAGTT
TTCGTAAGGATTTCTTTTCGTGATATTTATTTTCTTTTAAAGGCGAAAAT
TTGTGAAAACGCGAAATTTCAGTCCCGCATAGATTAAGGCAATTAAATTA
TTTTTGTGTGAATTTTTTCTTTGGTTTTTTATTTTTTGAATTTTTGTTGC
GATTTCAGTCCTTCATCCTTCATTTGTATGTGTAATAATTATTGTTAGTC
AAAAATATTGAACGGCTGAATTCTAATACTTTAATCGTAGAAATTTTAGC
GAGACTAATTTTTTAGCGAGTTTTCCCTATTTTCGCTAAAATAAATCTCG
TTAAAACACGCCGAATGGGCTCTTCCAGAAAAAATCCGTTCATGGGGGGG
GGGGGGGGGGATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNCCAGAAAAAATCTGTTCATGGGGGGTGGAGGATATAT
TATTTTTTTCATGAATTGCCCCTGGACATTTTGATTTTTAACACCCTGGA
CACGGGTTATACCCCTGGACAAACATCAAATCAACCCCCTGGACATTGGA
ATTTACCCCCTGGGCATTGCAATTTTTTGGTATTTTTTCAATACCCCTGG
ACAATTCATCCTCCACCCCCATGAACGGATTTTTTCTGGAAGAGCCCAAT
CGACAGGTCGCTAAAATTTATCTGCGCGAAATTTTTGGATATATTGCCTT
GATACATTTTTATCAATAGGAAGGGTTTCAGTACAAATAAATTCTAGAAA
ACGAATTCAATCAATAATGTAATACGAGTATTCGCTAAAATAAATCCAAA
AAAAATCAAGATTTTCCTGACTCGCTAATATACACTAAAATTAGTCTCGC
TAAAATTTCTACGATTAAAGTATAACACATAATTGGTCTGCAAGGGCTAG
GCCAAAATGAAGACCGGGCCCATAAGACAACTCCGATGACCGAGGCTATT
ATTTGCAATAGAATCGTCTTATGGAGAAAGGAACGATAATTTTTAAAAGA
ATTAAAACCTTAAAAATATTGTAGTCTAAAATTCTCGTAATTTATTTTTA
TACAGTAGTGTGTACTTTGTTTTAACATTTTTAAGTTTCATAATATTGTA
TTCTGTTTGTAAAAAGTTTCGGAATAATATAAACGTGACCAAATTTAGCA
ATTATGATGATGATGACTTATCTATGGGTCGGACTTCTTTTCAAACCTTT
TCGGACCAAAGGAAGAAGAAAATTGCACTTCTCAGGTCCACCGGACCCAA
AAAACCCCTTTTCACAATCATGTAGTTTTCGAAAGTGTATATCTTAGCTT
GTCGTGAAATTAGCCCCCTACCCCACGTCTGTCTGCTAGCTTGATTCTTT
CGAACCTAAGACGTCCTCGGAAACTGAAAACCTTTTAAAGCTTGACTGGC
TGAAGGTATTACTGCCTTCTTCTTTAATCAGATTAAATTTCGGGGGAGCG
AAAAAATCACGAAATTTTCTGGATTTAATTTCGCGAGTCAGAGTTTTGAA
AAATTTCTCGAATAAGCCTGAAAACAGCTGAAAAAATAGCCATTTTATGC
CACAAATAGAGACTTTGGGCTGGTTTATCCAACGAAAATTGATTTTTAAA
TTTTGTGATGGATTTAATTTCGCGAGTCAGTCATCTCACGCGATTTCGCG
AGTTTTAATTTCGCAAAAATTAATCCAAGTAAAGATATTGTCTTTGCAAA
AAAAAAGGAAATGGTAATCTCATTAAAATCCCTCATGTTAATTTAAGCGA
TAATTGATTCGATCAAATTTGTTTAATTATTTCGAAAGATTGATATTACC
ATAGTAATTTTCGCATACCTTATAGCTAATAGCTTTTCCATTTCATAGTT
ATATTTTTTGTATATGTTATTTATTAGAAAGCTGGAAAACACAGCCGCTA
ACTTTCATTTTATGTATTAAAACAGTACGGTATGAGTTTTAAACCAATCA
AAGCAAAGGATCAAGATAAATTTCAAAGTATGGATGATAAAGAATTGAAA
TTTGAATACAGTGTAGCTAAATATCAATACCAATGCGCTTGTAACGATTT
ATGGAAACAAAAAACCACGCTCAAAAGACTAAAAATGGTTGAAGAAATTC
GCAAAGAATCAAAACCCAACAATAATTTGGTTGGTAGCGTCAATTTAACG
AAAGATGTGGAACAGAGAAAAGCTTTGAATCAAGAGCTTGTCACCTTGCA
ACAAAGACTTAGAAACTTGAATTCAGAGTTGAAAGGATTAGTTCGTCAAC
GTAATGCAATACAAGACCGAAATTTCAAAATGGAGGACCAAATTGATCAA
ATTTTAGCTAGTAAAATTAGAGCTAGTAAAAATCGCTCGAAATCTGTACC
CGATGATATTAAAAAATCACATTCTGATCCAAACATCTTTTTAACCAGCT
CCTTAGGAACCTCACCTACTAGTCTAGGAGTACCAAAACCAAGAGCTAGG
CTAGGATCTGCTTTGACAGCAAACAGGAAGGTGCAATTTCCTTCTATAAA
GACAACAATGAAATTGAAAATGAACTTAATGGTGTTGAAAAAGAAAGCGC
AAATGAAAATTGAGGACCGGAAAAATGGGGAGGACGTAAAGAATGATTTT
CTACCGTTCCCTAAGTTATCAACGCGTGGTTCGAGCAGGTTCAACCAGAG
AAGAGGTTCTTGTAGAATCTGAGGTTATTGCTGAAAATACTGCCATGTTG
GATTTATTATAGTGTGAAATGGTGGGATTGAAACGCGCAAGATTGCAGAT
TGATGAATATTTTATTATTTTAAAAATCATATTTTGTAATTTACGCCAGT
TGATTTTTAAGCAACTAAAATACTAGCAGTTTCATAAAATCAAAATGTCA
ACATAAAAGACTATAGTTTCGCATTTGGTCTACCAATAGTTGGTTGGTTT
CCAAAGGGACATCATAGATAAAGACTTTTTAACTTGTACGGTGATGAATT
TGAATTTTAAAGTTGTACTGTAA

Coding sequence (CDS) from alignment at sc0000102:52901..62123-

>TCONS_00010090 ID=TCONS_00010090|Name=TCONS_00010090|organism=Clytia hemisphaerica|type=CDS|length=6363bp|location=Sequence derived from alignment at sc0000102:52901..62123- (Clytia hemisphaerica)
GAACACGGCGACGGTCTCCTATTTATATCGAAGTGAACAGATATCGGACA
CGAACTATGAATACGTTATATGTATGAACCAAACTGCTTATACGATGAGT
GGAAGGAAAAGACGATCTAATACATCATTACAGCCCTTAAATCTATAAAC
GTGTTTGTGCATTTGGTTGGAATTGGTCGCTGCTTGAAATGTTCGTCATA
CGATATTAACACGGCAGATATTCCAAGGTGATGTCAATATCAAAGTCAAG
TCACATTCTCAATTAAGAACGATAATTTCTTCAAAGCTGACATTTCGAAC
ATAAAGCAGGATATCAGTTGGAATCGTTTCATATTGAACTCGTCAGTTCT
TGATGGCAACAAACCTTTCCAAGTCAATGGAAGGACGCAACAAAATGAAG
TTATATCTGGGCATCACGTTTGTTGTTTGTATGATCGTCACTTTCCTGGT
CACATTCTTCCTGTTGCCACGTTCAGTATCCATTGAGATCATTGGCACTG
ATACCAAACATATTTACATGCCAGACAGTCTCAAGACTGTACCTTACATT
GACGTAGCTGACAAGCAGATAGTATGGTGGCACTAATACCCGTTCGTGAT
AAAAGACTAAAACCAAGAAAAACATGATGAACAAAAGTTTAATATCAGAC
GATGTTGAAAGCGACTCTTTAACATCAACTTATGAACATTTCGATCCTAT
TGATGAAGATCACCAAATAAGTCCAATACGTCCTGAGATAAATACAGAGA
AGCATCGATTACATAAAGACAATAGTATCGACAGTCAATGCTCAAGTCAT
GGTACTGTCAGACGCTCGCACTCTCCCGAACTGCATAAATATGAAGAATT
CTCGAATAAAATTAAACTGCAATGCCCGACCTGTAAAGGCAAAGGAAAAT
TAACTCAAGGAACACGGCGACGGTCTCCTATTTATATCGAAGTGAACAGA
TATCGGACACGAACTATGAATACGTTATATGTATGAACCAAACTGCTTAT
ACGATGAGTGGAAGGAAAAGACGATCTAATACATCATTACAGCCCTTAAA
TCTATAAACGTGTTTGTGCATTTGGTTGGAATTGGTCGCTGCTTGAAATG
TTCGTCATACGATATTAACACGGCAGATATTCCAAGGTGATGTCAATATC
AAAGTCAAGTCACATTCTCAATTAAGAACGATAATTTCTTCAAAGCTGAC
ATTTCGAACATAAAGCAGGATATCAGTTGGAATCGTTTCATATTGAACTC
GTCAGTTCTTGATGGCAACAAACCTTTCCAAGTCAATGGAAGGACGCAAC
AAAATGAAGTTATATCTGGGCATCACGTTTGTTGTTTGTATGATCGTCAC
TTTCCTGGTCACATTCTTCCTGTTGCCACGTTCAGTATCCATTGAGATCA
TTGGCACTGATACCAAACATATTTACATGCCAGACAGTCTCAAGACTGTA
CCTTACATTGACGTAGCTGACAAGCAGATAGTATGGTGGCACTAATACCC
GTTCGTGATAAAAGACTAAAACCAAGAAAAACATGATGAACAAAAGTTTA
ATATCAGACGATGTTGAAAGCGACTCTTTAACATCAACTTATGAACATTT
CGATCCTATTGATGAAGATCACCAAATAAGTCCAATACGTCCTGAGATAA
ATACAGAGAAGCATCGATTACATAAAGACAATAGTATCGACAGTCAATGC
TCAAGTCATGGTACTGTCAGACGCTCGCACTCTCCCGAACTGCATAAATA
TGAAGAATTCTCGAATAAAATTAAACTGCAATGCCCGACCTGTAAAGGCA
AAGGAAAATTAACTCAAGGAACACGGCGACGGTCTCCTATTTATATCGAA
GTGAACAGATATCGGACACGAACTATGAATACGTTATATGTATGAACCAA
ACTGCTTATACGATGAGTGGAAGGAAAAGACGATCTAATACATCATTACA
GCCCTTAAATCTATAAACGTGTTTGTGCATTTGGTTGGAATTGGTCGCTG
CTTGAAATGTTCGTCATACGATATTAACACGGCAGATATTCCAAGGTGAT
GTCAATATCAAAGTCAAGTCACATTCTCAATTAAGAACGATAATTTCTTC
AAAGCTGACATTTCGAACATAAAGCAGGATATCAGTTGGAATCGTTTCAT
ATTGAACTCGTCAGTTCTTGATGGCAACAAACCTTTCCAAGTCAATGGAA
GGACGCAACAAAATGAAGTTATATCTGGGCATCACGTTTGTTGTTTGTAT
GATCGTCACTTTCCTGGTCACATTCTTCCTGTTGCCACGTTCAGTATCCA
TTGAGATCATTGGCACTGATACCAAACATATTTACATGCCAGACAGTCTC
AAGACTGTACCTTACATTGACGTAGCTGACAAGCAGATAGTATGGTGGCA
CTAATACCCGTTCGTGATAAAAGACTAAAACCAAGAAAAACATGATGAAC
AAAAGTTTAATATCAGACGATGTTGAAAGCGACTCTTTAACATCAACTTA
TGAACATTTCGATCCTATTGATGAAGATCACCAAATAAGTCCAATACGTC
CTGAGATAAATACAGAGAAGCATCGATTACATAAAGACAATAGTATCGAC
AGTCAATGCTCAAGTCATGGTACTGTCAGACGCTCGCACTCTCCCGAACT
GCATAAATATGAAGAATTCTCGAATAAAATTAAACTGCAATGCCCGACCT
GTAAAGGCAAAGGAAAATTAACTCAAGGAACACGGCGACGGTCTCCTATT
TATATCGAAGTGAACAGATATCGGACACGAACTATGAATACGTTATATGT
ATGAACCAAACTGCTTATACGATGAGTGGAAGGAAAAGACGATCTAATAC
ATCATTACAGCCCTTAAATCTATAAACGTGTTTGTGCATTTGGTTGGAAT
TGGTCGCTGCTTGAAATGTTCGTCATACGATATTAACACGGCAGATATTC
CAAGGTGATGTCAATATCAAAGTCAAGTCACATTCTCAATTAAGAACGAT
AATTTCTTCAAAGCTGACATTTCGAACATAAAGCAGGATATCAGTTGGAA
TCGTTTCATATTGAACTCGTCAGTTCTTGATGGCAACAAACCTTTCCAAG
TCAATGGAAGGACGCAACAAAATGAAGTTATATCTGGGCATCACGTTTGT
TGTTTGTATGATCGTCACTTTCCTGGTCACATTCTTCCTGTTGCCACGTT
CAGTATCCATTGAGATCATTGGCACTGATACCAAACATATTTACATGCCA
GACAGTCTCAAGACTGTACCTTACATTGACGTAGCTGACAAGCAGATAGT
ATGGTGGCACTAATACCCGTTCGTGATAAAAGACTAAAACCAAGAAAAAC
ATGATGAACAAAAGTTTAATATCAGACGATGTTGAAAGCGACTCTTTAAC
ATCAACTTATGAACATTTCGATCCTATTGATGAAGATCACCAAATAAGTC
CAATACGTCCTGAGATAAATACAGAGAAGCATCGATTACATAAAGACAAT
AGTATCGACAGTCAATGCTCAAGTCATGGTACTGTCAGACGCTCGCACTC
TCCCGAACTGCATAAATATGAAGAATTCTCGAATAAAATTAAACTGCAAT
GCCCGACCTGTAAAGGCAAAGGAAAATTAACTCAAGGAACACGGCGACGG
TCTCCTATTTATATCGAAGTGAACAGATATCGGACACGAACTATGAATAC
GTTATATGTATGAACCAAACTGCTTATACGATGAGTGGAAGGAAAAGACG
ATCTAATACATCATTACAGCCCTTAAATCTATAAACGTGTTTGTGCATTT
GGTTGGAATTGGTCGCTGCTTGAAATGTTCGTCATACGATATTAACACGG
CAGATATTCCAAGGTGATGTCAATATCAAAGTCAAGTCACATTCTCAATT
AAGAACGATAATTTCTTCAAAGCTGACATTTCGAACATAAAGCAGGATAT
CAGTTGGAATCGTTTCATATTGAACTCGTCAGTTCTTGATGGCAACAAAC
CTTTCCAAGTCAATGGAAGGACGCAACAAAATGAAGTTATATCTGGGCAT
CACGTTTGTTGTTTGTATGATCGTCACTTTCCTGGTCACATTCTTCCTGT
TGCCACGTTCAGTATCCATTGAGATCATTGGCACTGATACCAAACATATT
TACATGCCAGACAGTCTCAAGACTGTACCTTACATTGACGTAGCTGACAA
GCAGATAGTATGGTGGCACTAATACCCGTTCGTGATAAAAGACTAAAACC
AAGAAAAACATGATGAACAAAAGTTTAATATCAGACGATGTTGAAAGCGA
CTCTTTAACATCAACTTATGAACATTTCGATCCTATTGATGAAGATCACC
AAATAAGTCCAATACGTCCTGAGATAAATACAGAGAAGCATCGATTACAT
AAAGACAATAGTATCGACAGTCAATGCTCAAGTCATGGTACTGTCAGACG
CTCGCACTCTCCCGAACTGCATAAATATGAAGAATTCTCGAATAAAATTA
AACTGCAATGCCCGACCTGTAAAGGCAAAGGAAAATTAACTCAAGGAACA
CGGCGACGGTCTCCTATTTATATCGAAGTGAACAGATATCGGACACGAAC
TATGAATACGTTATATGTATGAACCAAACTGCTTATACGATGAGTGGAAG
GAAAAGACGATCTAATACATCATTACAGCCCTTAAATCTATAAACGTGTT
TGTGCATTTGGTTGGAATTGGTCGCTGCTTGAAATGTTCGTCATACGATA
TTAACACGGCAGATATTCCAAGGTGATGTCAATATCAAAGTCAAGTCACA
TTCTCAATTAAGAACGATAATTTCTTCAAAGCTGACATTTCGAACATAAA
GCAGGATATCAGTTGGAATCGTTTCATATTGAACTCGTCAGTTCTTGATG
GCAACAAACCTTTCCAAGTCAATGGAAGGACGCAACAAAATGAAGTTATA
TCTGGGCATCACGTTTGTTGTTTGTATGATCGTCACTTTCCTGGTCACAT
TCTTCCTGTTGCCACGTTCAGTATCCATTGAGATCATTGGCACTGATACC
AAACATATTTACATGCCAGACAGTCTCAAGACTGTACCTTACATTGACGT
AGCTGACAAGCAGATAGTATGGTGGCACTAATACCCGTTCGTGATAAAAG
ACTAAAACCAAGAAAAACATGATGAACAAAAGTTTAATATCAGACGATGT
TGAAAGCGACTCTTTAACATCAACTTATGAACATTTCGATCCTATTGATG
AAGATCACCAAATAAGTCCAATACGTCCTGAGATAAATACAGAGAAGCAT
CGATTACATAAAGACAATAGTATCGACAGTCAATGCTCAAGTCATGGTAC
TGTCAGACGCTCGCACTCTCCCGAACTGCATAAATATGAAGAATTCTCGA
ATAAAATTAAACTGCAATGCCCGACCTGTAAAGGCAAAGGAAAATTAACT
CAAGGAACACGGCGACGGTCTCCTATTTATATCGAAGTGAACAGATATCG
GACACGAACTATGAATACGTTATATGTATGAACCAAACTGCTTATACGAT
GAGTGGAAGGAAAAGACGATCTAATACATCATTACAGCCCTTAAATCTAT
AAACGTGTTTGTGCATTTGGTTGGAATTGGTCGCTGCTTGAAATGTTCGT
CATACGATATTAACACGGCAGATATTCCAAGGTGATGTCAATATCAAAGT
CAAGTCACATTCTCAATTAAGAACGATAATTTCTTCAAAGCTGACATTTC
GAACATAAAGCAGGATATCAGTTGGAATCGTTTCATATTGAACTCGTCAG
TTCTTGATGGCAACAAACCTTTCCAAGTCAATGGAAGGACGCAACAAAAT
GAAGTTATATCTGGGCATCACGTTTGTTGTTTGTATGATCGTCACTTTCC
TGGTCACATTCTTCCTGTTGCCACGTTCAGTATCCATTGAGATCATTGGC
ACTGATACCAAACATATTTACATGCCAGACAGTCTCAAGACTGTACCTTA
CATTGACGTAGCTGACAAGCAGATAGTATGGTGGCACTAATACCCGTTCG
TGATAAAAGACTAAAACCAAGAAAAACATGATGAACAAAAGTTTAATATC
AGACGATGTTGAAAGCGACTCTTTAACATCAACTTATGAACATTTCGATC
CTATTGATGAAGATCACCAAATAAGTCCAATACGTCCTGAGATAAATACA
GAGAAGCATCGATTACATAAAGACAATAGTATCGACAGTCAATGCTCAAG
TCATGGTACTGTCAGACGCTCGCACTCTCCCGAACTGCATAAATATGAAG
AATTCTCGAATAAAATTAAACTGCAATGCCCGACCTGTAAAGGCAAAGGA
AAATTAACTCAAG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_005658	XLOC_005658	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00010090-protein	TCONS_00010090-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000102	supercontig	sc0000102:52901..62123 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.435827	0.348146	0.0570217	0.0975214	3.81609	3.71808	6.34505	6.52382	4.20437	3.44555	3.74216	7.25514	0.516493	0.411992	0.816402	0.412	1.04436	0.789063	0.391447	0.414068	0.612572	0.924471	1.21919	1.45917	0.293053	0.138617	1.97932	1.45808	1.62859	0.834623

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR009790	DUF1356_TMEM106

Blast

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BLAST of TCONS_00010090 vs. Swiss-Prot (Human)
Match: T106B (Transmembrane protein 106B OS=Homo sapiens GN=TMEM106B PE=1 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 1.774e-26
Identity = 72/235 (30.64%), Postives = 125/235 (53.19%), Query Frame = 1

Query:  502 YEEFSNKIKLQCPTCKGKGKLTQGQADSMVALIPVRDKRLKPRKTKLYLGITFVVCMIVTFLVTFFLLPRSVSIEIIGTDTKHIYMPDSLKTVPYIDVAVTFSIKNDNFFKADISNIKQDISWNRFILNSSVLDG---NKPFQVNGRTQQNHTILTRQI-----FQGDVNIKVKRVCAFGWNWSLLEMFVNTATVSYLYRSEQISDTNYEYVICMNQTAYTMSGRKRRSNTSLQP 1182
            Y EF+ +  + CPTC+G G++ +GQ + +VALIP  D+RL+PR+TKLY+  +  VC++++ L  FFL PRS+ ++ IG  + ++   D  K   Y+++  T +I N+N++  ++ NI   + +++ ++  + L+      P  +        T++  ++     F   ++IKV  +           M   T T +Y   SEQIS   Y+YV C   T Y + G+    N  LQP
Sbjct:   50 YVEFTGRDSVTCPTCQGTGRIPRGQENQLVALIPYSDQRLRPRRTKLYVMASVFVCLLLSGLAVFFLFPRSIDVKYIGVKSAYVSY-DVQKRTIYLNITNTLNITNNNYYSVEVENITAQVQFSKTVIGKARLNNITIIGPLDMKQIDYTVPTVIAEEMSYMYDFCTLISIKVHNIVL---------MMQVTVTTTYFGHSEQISQERYQYVDCGRNTTYQL-GQSEYLNV-LQP 272

The following BLAST results are available for this feature:

BLAST of TCONS_00010090 vs. Swiss-Prot (Human)

BLAST of TCONS_00010090 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
T106B	1.774e-26	30.64	Transmembrane protein 106B OS=Homo sapiens GN=TMEM...	[more]

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TCONS_00010090 (transcript) - C. hemisphaerica