TCONS_00009777-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00009777-protein
Unique NameTCONS_00009777-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length200

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00009777-protein ID=TCONS_00009777-protein|Name=TCONS_00009777-protein|organism=Clytia hemisphaerica|type=polypeptide|length=200bp
MLLILTDEQKQHLTLVNQVDATVAKEFCRIAAEFIQNGINTKKYQMAAQK
LELDAKLIAQCVEAIMYLLSESSKMFLVETDFKDSLLSLDLDEDVFNTLV
EFYENNKQDIRKILSKMELSLPQYKNLEWRFDVQLATRMLTYQTTPQVML
KLHLNKGPGENDVTVLQTDPVNLVHMTQVLEEALNEIKTAHCRRIARNIK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005468XLOC_005468Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00009777TCONS_00009777Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017920COMM
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017920COMM domainPFAMPF07258COMM_domaincoord: 121..191
e-value: 9.6E-14
score: 51.2
IPR017920COMM domainPROSITEPS51269COMMcoord: 123..191
score: 13.859
NoneNo IPR availableCDDcd04750Commd2coord: 26..191
e-value: 2.62447E-62
score: 192.143

Blast
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BLAST of TCONS_00009777-protein vs. Swiss-Prot (Human)
Match: COMD2 (COMM domain-containing protein 2 OS=Homo sapiens GN=COMMD2 PE=1 SV=2)

HSP 1 Score: 201.445 bits (511), Expect = 4.620e-66
Identity = 100/200 (50.00%), Postives = 139/200 (69.50%), Query Frame = 0 
Query:    1 MLLILTDEQKQHLTLVNQVDATVAKEFCRIAAEFIQNGINTKKYQMAAQKLELDAKLIAQCVEAIMYLLSESSKMFLVETDFKDSLLSLDLDEDVFNTLVEFYENNKQDIRKILSKMELSLPQYKNLEWRFDVQLATRMLTYQTTPQVMLKLHLNKGPGENDVTVLQTDPVNLVHMTQVLEEALNEIKTAHCRRIARNIK 200
            MLL L++E K+HL  + QVD+ V  EF RIA EF++ G N K Y+ AA+KL + +  +   VE + YLL+ESSK+ + E DF+DS+  L   E++   L++ Y +N+++IR ILS++  SLP Y NLEWR DVQLA+R L  Q  P V +KLHLN+  G+++  VLQTDP  L+H+ Q LE+AL E+KT HCRR+ RNIK
Sbjct:    1 MLLELSEEHKEHLAFLPQVDSAVVAEFGRIAVEFLRRGANPKIYEGAARKLNVSSDTVQHGVEGLTYLLTESSKLMISELDFQDSVFVLGFSEELNKLLLQLYLDNRKEIRTILSELAPSLPSYHNLEWRLDVQLASRSLRQQIKPAVTIKLHLNQN-GDHNTKVLQTDPATLLHLVQQLEQALEEMKTNHCRRVVRNIK 199
The following BLAST results are available for this feature:
BLAST of TCONS_00009777-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
COMD24.620e-6650.00COMM domain-containing protein 2 OS=Homo sapiens G... [more]
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