TCONS_00007973-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00007973-protein
Unique NameTCONS_00007973-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length202

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00007973-protein ID=TCONS_00007973-protein|Name=TCONS_00007973-protein|organism=Clytia hemisphaerica|type=polypeptide|length=202bp
KTPAPLISWTTAIVVVYSITDRNSFALARHILEIIDKIKPLSSRCTLLIG
NKCDLMHLRQVPKSDAKKLADDFGVHFLECSAAENYDDIFSSFTRLLVEA
MIAQSAKKHSWDDQNADDVKQNENRLRKRSLSTGQAPSKDSNNNTSFLGG
LREKKDSMIKIDERIPSPVEQRDTPAPQRKQSLRRKISGIGSKLVGSGQS
NR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004493XLOC_004493Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00007973TCONS_00007973Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR020849Small_GTPase_Ras
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007165 signal transduction
cellular_component GO:0016020 membrane
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 8..103
e-value: 2.9E-4
score: -56.5
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 8..103
e-value: 3.5E-6
score: -21.4
NoneNo IPR availableGENE3D3.40.50.300coord: 4..100
e-value: 1.2E-18
score: 66.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 109..202
IPR001806Small GTPase superfamilyPFAMPF00071Rascoord: 10..95
e-value: 9.9E-17
score: 60.9
IPR020849Small GTPase superfamily, Ras typePROSITEPS51421RAScoord: 1..195
score: 12.488
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 7..101

Blast
[Close]
BLAST of TCONS_00007973-protein vs. Swiss-Prot (Human)
Match: RSLBA (Ras-like protein family member 11A OS=Homo sapiens GN=RASL11A PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.629e-18
Identity = 37/94 (39.36%), Postives = 55/94 (58.51%), Query Frame = 0 
Query:    7 ISWTTAIVVVYSITDRNSFALARHILEIIDKIKPLSSRCTLLIGNKCDLMHLRQVPKSDAKKLADDFGVHFLECSAAENYDDIFSSFTRLLVEA 100
            + W    ++VYSITD +S+   R + + I K+ P S    +++GNK DL+H RQV   D  +LA++ G  FLE S +ENY+D+   F  L  E 
Sbjct:  103 VQWAEGFLLVYSITDYDSYLSIRPLYQHIRKVHPDSKAPVIIVGNKGDLLHARQVQTQDGIQLANELGSLFLEISTSENYEDVCDVFQHLCKEV 196
The following BLAST results are available for this feature:
BLAST of TCONS_00007973-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RSLBA3.629e-1839.36Ras-like protein family member 11A OS=Homo sapiens... [more]
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