TCONS_00007872-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00007872-protein
Unique Name	TCONS_00007872-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	752

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00007872-protein ID=TCONS_00007872-protein|Name=TCONS_00007872-protein|organism=Clytia hemisphaerica|type=polypeptide|length=752bp
MYNWPSNVLLLLALQVGTAQLQTEIVPLVTSSSCLVYIKSVDYPRQFWYA
YHETLPILSEISKTLWTVDQDFIENRDEAVAFRVHNTSDTNAIGQFLCIF
KDQLIRLCKPTDDPWKRAFKVVNRNGTTFELMALLPGANDPKLHVEYYSS
VVQYRFDLKEVTADQGVRWEVEVAQGCYGILRDTTTSTIPPTTEEPTTTQ
PPTTTEQSTTEPTPPPTTTTTTTTTTTTTTTTTTESQVCVGEIVDVKNHS
ECFLPKSASDAQIIIENQLEIVKSKVEAFKQVKNETVKEEQAKEITQMSL
QYAVDVESIGMAIAKKLNTNDSVSITTGNLELLAKQQRLPFKFPENDNAT
SFIEVQSLSGDDEKVPVVGVLHRDIHENLQTNVQLQIDLDEESKGDEEEY
TVNSQLISASVGNGTLISNVLVTLDHLKKIKDFNSTICAFWLESSDTEGR
WDTQGCVKIKSTQDATQCSCSHLTNFALLTNIREFEIPVIHRTILSMMSL
VCCWISIVFLLIGILLFSMLFMGGKRHTRHIIHTNLMVALCASQLIFVFG
IEATENKIVCQTVAYLLHFFLMASFTWMLVEGLYLYYAIIKVFSDGKIYL
SWYIIFAWGAPAVVVGITGGLRHHWYGTPEYCWLSTEGHAIWGFLGPVAA
IIIVNTWILVLIIRQIVALAKSTGIADDVKTGFRSSLILLPILGVTWIFG
FLSFNTHTIAFQYIFAISNSLQGFLVTLFHVFLNSEVRNAIRRKTLVWKH
TT

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_004460	XLOC_004460	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00007872	TCONS_00007872	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000832	GPCR_2_secretin-like
IPR000203	GPS
IPR017981	GPCR_2-like

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Molecular Function**
Term	Definition
GO:0004930	G-protein coupled receptor activity
GO:0004888	transmembrane signaling receptor activity

Vocabulary: **Biological Process**
Term	Definition
GO:0007186	G-protein coupled receptor signaling pathway
GO:0007166	cell surface receptor signaling pathway

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007166	cell surface receptor signaling pathway
biological_process	GO:0007186	G-protein coupled receptor signaling pathway
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004930	G-protein coupled receptor activity
molecular_function	GO:0004888	transmembrane signaling receptor activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000832	GPCR, family 2, secretin-like	PRINTS	PR00249	GPCRSECRETIN	coord: 497..521 score: 22.37 coord: 682..702 score: 31.88 coord: 642..667 score: 29.73 coord: 600..625 score: 27.05 coord: 562..585 score: 39.27 coord: 712..733 score: 32.67
IPR000832	GPCR, family 2, secretin-like	PFAM	PF00002	7tm_2	coord: 495..726 e-value: 1.0E-51 score: 175.5
IPR000203	GPS motif	SMART	SM00303	GPS_3	coord: 434..485 e-value: 4.3E-9 score: 46.2
IPR000203	GPS motif	PFAM	PF01825	GPS	coord: 437..479 e-value: 2.0E-12 score: 47.4
IPR000203	GPS motif	PROSITE	PS50221	GPS	coord: 435..485 score: 14.639
None	No IPR available	GENE3D	1.20.1070.10		coord: 484..752 e-value: 1.9E-34 score: 118.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 184..234
None	No IPR available	SUPERFAMILY	81321	Family A G protein-coupled receptor-like	coord: 496..746
IPR017981	GPCR, family 2-like	PROSITE	PS50261	G_PROTEIN_RECEP_F2_4	coord: 495..734 score: 36.305

Blast

[Close]

BLAST of TCONS_00007872-protein vs. Swiss-Prot (Human)
Match: AGRL3 (Adhesion G protein-coupled receptor L3 OS=Homo sapiens GN=ADGRL3 PE=1 SV=2)

HSP 1 Score: 240.736 bits (613), Expect = 9.516e-67
Identity = 146/453 (32.23%), Postives = 240/453 (52.98%), Query Frame = 0

Query:  306 VESIGMAIAKKLNTNDSVSITTGNLEL----LAKQQRLP-FKFPENDNATSFIEVQS----LSGDDEKVPVVGVLHRDIHENLQTNVQLQIDLDEESKGDEEEYTVNSQLISASVGNG-----TLISNVLVTLDHLKKIKDFNSTICAFWLESSDT-EGRWDTQGCVKIKSTQDATQCSCSHLTNFA-LLTNIREFEIPVIHRTILSMMSLVCCWISIVFLLIGILLFSMLFMGGKRHTRHIIHTNLMVALCASQLIFVFGIEATENKIVCQTVAYLLHFFLMASFTWMLVEGLYLYYAIIKVFSDGKIYLSWYIIFAWGAPAVVVGITGGLRHHWYGTPEYCWLSTEGHAIWGFLGPVAAIIIVNTWILVLIIRQI----VALAKSTGIADDVKTGFRSSLILLPILGVTWIFGFLSFNTHTIAFQYIFAISNSLQGFLVTLFHVFLNSEVR 738
            VE     +A  L   D V   T N++L    L+ +  L   KFPEN    S I++ +     +G + ++ V  VL+ ++   L T     + L  E+        VNS +I+A++         L   V+ T+ H+K+ ++  +  C+FW  S  T  G W TQGC  + + +  T CSC+HLTNFA L+ ++       +H  +L +++ V   +S+V LLI I  F+  F  G +  R+ IH NL ++L  ++L+F+ GI  T+  I C   A LLHFF +A+FTWM +EG+ LY  +++VF        ++ +  +G PA++V ++  + +  YGT + CWL  + + IW F+GP   II++N   L + + ++      L   +G  D++K+    ++ LL +LG+TW FG +  N  T+   Y+F I NSLQG  + +FH  L  +VR
Sbjct:  660 VEESAFVLADNLLKTDIVRENTDNIKLEVARLSTEGNLEDLKFPENMGHGSTIQLSANTLKQNGRNGEIRVAFVLYNNLGPYLSTE-NASMKLGTEALSTNHSVIVNSPVITAAINKEFSNKVYLADPVVFTVKHIKQSEENFNPNCSFWSYSKRTMTGYWSTQGCRLLTTNKTHTTCSCNHLTNFAVLMAHVEVKHSDAVHDLLLDVITWVGILLSLVCLLICI--FTFCFFRGLQSDRNTIHKNLCISLFVAELLFLIGINRTDQPIACAVFAALLHFFFLAAFTWMFLEGVQLYIMLVEVFESEHSRRKYFYLVGYGMPALIVAVSAAVDYRSYGTDKVCWLRLDTYFIWSFIGPATLIIMLNVIFLGIALYKMFHHTAILKPESGCLDNIKSWVIGAIALLCLLGLTWAFGLMYINESTVIMAYLFTIFNSLQGMFIFIFHCVLQKKVR 1109

The following BLAST results are available for this feature:

BLAST of TCONS_00007872-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00007872-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
AGRL3	9.516e-67	32.23	Adhesion G protein-coupled receptor L3 OS=Homo sap...	[more]

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TCONS_00007872-protein (polypeptide) - C. hemisphaerica