TCONS_00007470-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00007470-protein
Unique NameTCONS_00007470-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length488

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00007470-protein ID=TCONS_00007470-protein|Name=TCONS_00007470-protein|organism=Clytia hemisphaerica|type=polypeptide|length=488bp
MNFNRMPRCLLLLKLFLIGSIQASSIFSANEINIYNGDDYTSHSFVEYPQ
WVDPTIKDNTEALKVGTLEFKFKTNSRSCILLFANDGITSNGETERNQLQ
LSLVQAGGLKAEFNMGHMDEKSSKEVTIGNRWNDMEWHHVIVTRNYRQVT
VYIDGEEGVMVSFGDEDHLKLTAHVRIGGFETSSGFSGCIKDVKYGSGSG
TKVQYPRNTKGKVREGCFTECPRNIRNKCKNGGECMRYFDPDDECKNCQC
DCSLTGFSGETCSLEDPIGYLQDKQYITTITESLRSSRVNHVQFRFRTNQ
PSGLILFHGKSSEYLLIELVDGNIELEMSLETDKISLRLGSGQFHNGEWH
SVLVKRQGDKVMLKVDQRTVEKVFKYTPQLTCEGQHSKFLFIGGHQNPNS
LPKRLNGRKNFNGCLQQVFFKVDGRYQNEERDILQRSSYSNRFRVEGGAI
NTNSCPVFEQYIRPVEPTTTTTATQKTDPAVHTDXRSC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004213XLOC_004213Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00007470TCONS_00007470Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001791Laminin_G
IPR013320ConA-like_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001791Laminin G domainSMARTSM00282LamG_3coord: 288..423
e-value: 9.2E-27
score: 104.9
coord: 64..198
e-value: 3.9E-21
score: 86.2
IPR001791Laminin G domainPFAMPF02210Laminin_G_2coord: 72..196
e-value: 1.5E-17
score: 64.2
coord: 296..420
e-value: 9.3E-23
score: 81.1
IPR001791Laminin G domainPROSITEPS50025LAM_G_DOMAINcoord: 35..217
score: 30.85
IPR001791Laminin G domainPROSITEPS50025LAM_G_DOMAINcoord: 267..455
score: 32.356
NoneNo IPR availableGENE3D2.60.120.200coord: 39..221
e-value: 1.2E-25
score: 89.9
NoneNo IPR availableGENE3D2.60.120.200coord: 242..442
e-value: 1.7E-32
score: 112.0
NoneNo IPR availableCDDcd00110LamGcoord: 40..195
e-value: 2.79972E-17
score: 77.8436
NoneNo IPR availableCDDcd00110LamGcoord: 291..420
e-value: 2.2124E-24
score: 97.874
IPR013320Concanavalin A-like lectin/glucanase domainSUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 43..219
IPR013320Concanavalin A-like lectin/glucanase domainSUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 249..420

Blast
[Close]
BLAST of TCONS_00007470-protein vs. Swiss-Prot (Human)
Match: NRX3A (Neurexin-3 OS=Homo sapiens GN=NRXN3 PE=1 SV=4)

HSP 1 Score: 107.457 bits (267), Expect = 1.949e-24
Identity = 104/389 (26.74%), Postives = 174/389 (44.73%), Query Frame = 0 
Query:   68 LEFKFKTNSRSCILLFANDGITSNGETERNQLQLSLVQAGGLKAEFNMGHMDEKSSKEVTIGNRWNDMEWHHVIVTRNYRQVTVYIDGEEGVMVSFGDEDHLKLTAHVRIGGFETS--------------SGFSGCIKDVKYGSGSGTKVQYPRNTKGKVREGCFTECPRNIRNKCKNGGECMRYFDPDDECKNCQCDCSLTGFSGETCS---LEDP---------------IGYLQDKQYIT-TITESLRSSRVNHVQFRFRTNQPSGLILFHGKSSEYLLIELVDGNIELEMSLETDKIS--LRLGSGQFHNGEWHSVLVKRQGDKVMLKVDQRTVEKVFKYTPQLTCEGQHSKFLFIGGHQNPNSLPKRLNGRKNFNGCLQQVFFK 421
            L F+FKTN  + +LL+ +DG   +       L LSLV  G ++  F+M    + +   V    + ND  WH ++V+R+  +  + +DGE           ++ + + + +GG  T                GF G I D+KYG+ S  ++   R  +    EG   E P      C+NGG C    D      +  CDCS TG+ G+ CS    +DP               +   +  +Y+   ++++   S  + +   F+T Q +GLIL  GKS++Y+ + L DG + L ++L +      +   +G+F++  WH V V R   +V + VD   +     YT +         F ++GG  +   LP       NF GCL++V +K
Sbjct:   51 LSFQFKTNVSTGLLLYLDDGGVCD------FLCLSLVD-GRVQLRFSM----DCAETAVLSNKQVNDSSWHFLMVSRDRLRTVLMLDGEGQSGELQPQRPYMDVVSDLFLGGVPTDIRPSALTLDGVQAMPGFKGLILDLKYGN-SEPRLLGSRGVQMDA-EGPCGERP------CENGGICF-LLD-----GHPTCDCSTTGYGGKLCSEDVSQDPGLSHLMMSEQAREENVATFRGSEYLCYDLSQNPIQSSSDEITLSFKTWQRNGLILHTGKSADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFNDNAWHDVKVTRNLRQVTISVDG--ILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGS-PVSNNFMGCLKEVVYK 411

HSP 2 Score: 88.9669 bits (219), Expect = 1.506e-18
Identity = 86/382 (22.51%), Postives = 154/382 (40.31%), Query Frame = 0 
Query:   41 TSHSFVEYPQWVDPTIKDNTEALKVGTLEFKFKTNSRSCILLFANDGIT--SNGETERNQLQLSLVQAGGLKAEFNMGHMDEKSSKEVTIGNRWNDMEWHHVIVTRNYRQVTVYIDGEEGVMVSFGDEDHLKLTAHVRIGGFETSS----------------GFSGCIKDVKYGSGSGTKVQYP--RNTKGKVREGCFTECPRNIRN-KCKNGGECMRYFDPDDECKNCQCDCSLTGFSGETCSLEDPIGYLQDKQYITTITESLRSSRVNHVQFRFRTNQPSGLILFHGK--SSEYLLIELVDGNIELEMSLETDKISLRLGSG--------QFHNGEWHSVLVKRQGDKVMLKVDQRTVEKVFKYTPQLTCEGQHSKFLF 391
            T  +++  P+W       NT+  ++G++ F F+T   + ++LF +       +  +++N               + +  M   + K      + ND EW+HV + R+ R  T+ ++       + G+ + L L   + +GG   +                 G+ GCI+D+     S    Q    +N  G V+  C     +   +  CKN   C       D      CDC+ TG+ G TC  E  I       Y+  I   +  +    V FRF + +  GL++      S++ L +EL  G ++L ++L+  +I+     G        + ++ EWH+V V R+G  + L VD    E         T  G H++  F
Sbjct:  453 TPEAYISLPKW-------NTK--RMGSISFDFRTTEPNGLILFTHGKPQERKDARSQKNTKVDFFAVELLDGNLYLLLDMGSGTIKVKATQKKANDGEWYHVDIQRDGRSGTISVNSRRTPFTASGESEILDLEGDMYLGGLPENRAGLILPTELWTAMLNYGYVGCIRDLFIDGRSKNIRQLAEMQNAAG-VKSSCSRMSAKQCDSYPCKNNAVC------KDGWNRFICDCTGTGYWGRTCEREASILSYDGSMYMKIIMPMVMHTEAEDVSFRFMSQRAYGLLVATTSRDSADTLRLELDGGRVKLMVNLDCIRINCNSSKGPETLYAGQKLNDNEWHTVRVVRRGKSLKLTVDDDVAEG--------TMVGDHTRLEF 810
The following BLAST results are available for this feature:
BLAST of TCONS_00007470-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NRX3A1.949e-2426.74Neurexin-3 OS=Homo sapiens GN=NRXN3 PE=1 SV=4[more]
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