TCONS_00007470 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007470
Unique NameTCONS_00007470
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2794

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007470 ID=TCONS_00007470|Name=TCONS_00007470|organism=Clytia hemisphaerica|type=transcript|length=2794bp
ttttgatgtttttagggGCGAGCATAAAAAAGGGGTTAGTCTTTTCACAG
TAAAAACATATACATCATAAAAAATTTTCATTTGGTGAGGATCGATTGAA
GCCTAATCAAATTTATTCCATCGTGGAAATTAACTTTCGACTGCTCCAGC
AATGAATTTTAACAGAATGCCAAGATGTTTACTGTTACTCAAACTGTTTC
TCATTGGTTCGATCCAAGCCTCTTCCATATTTTCAGCCAATGAGATCAAT
ATTTATAACGGTGATGATTATACGTCACATTCTTTTGTGGAGTACCCACA
ATGGGTTGATCCGACCATCAAAGACAATACCGAAGCTCTCAAAGTGGGTA
CATTAGAATTCAAATTTAAAACCAATTCAAGAAGttgtattttattgttc
gcAAATGATGGAATCACTTCAAATGGCGAAACTGAGAGAAATCAACTTCA
ATTGAGTTTAGTCCAAGCGGGCGGACTGAAGGCGGAATTCAATATGGGTC
ACATGGACGAGAAAAGTAGTAAAGAGGTTACCATAGGCAACCGTTGGAAT
GATATGGAATGGCACCATGtgatagtgacacgaaattatCGGCAAGTCAC
CGTTTATATAGATGGCGAGGAAGGTGTGATGGTGTCTTTTGGAGATGAAG
ATCATTTGAAATTGACAGCTCATGTCCGAATTGGTGGATTCGAAACTTCC
AGTGGTTTCAGTGGCTGCATCAAGGACGTCAAATATGGTTCCGGAAGTGG
AACCAAAGTTCAATACCCAAGAAACACAAAGGGTAAAGTCCGGGAAGGTT
GTTTTACGGAATGTCCTAGAAACATCCGGAACAAGTGTAAAAATGGTGGA
GAATGTATGCGGTATTTCGATCCTGATGACGAGTGCAAGAATTGTCAATG
TGATTGTTCGTTGACTGGATTTTCTGGGGAAACGTGCTCTCTTGAAGATC
CGATTGGCTATTTGCAAGACAAACAATACATCACAACAATTACTGAGTCA
TTACGTTCATCACGTGTCAATCACGTGCAATTTCGGTTCCGTACAAACCA
ACCGTCCGGTTTGATTTTATTTCACGGAAAAAGTTCGGAATATTTGTTGA
TTGAACTTGTGGACGGGAATATTGAATTGGAAATGTCTCTTGAAACTGAC
AAAATTTCATTACGACTGGGTAGCGGTCAATTTCACAATGGGGAATGGCA
CTCAGTGTTGGTCAAACGACAAGGAGATAAAGTTATGTTAAAAGTCGATC
AAAGAACCGTAGAGAAAGTGTTCAAATACACACCTCAATTAACGTGTGAA
GGACAACACAGCAAGTTCTTATTCATTGGTGGACATCAGAATCCTAACTC
ACTTCCGAAACGTTTGAATGGACGAAAGAACTTCAATGGGTGTTTGCAAC
AAGTATTTTTCAAGGTTGACGGTCGTTACCAAAACGAAGAGCGCGACATC
TTACAACGATCAAGTTACAGCAACCGGTTTCGTGTGGAAGGTGGAGCCAT
CAACACAAATTCTTGTCCAGTCTTTGAACAATATATTCGTCCCGTTGAAC
CAACAACGACAACCACTGCTACACAAAAGACAGACCCAGCCGTACACACT
GACANTAGGTCCTGTTGAACCAACAACGACAGTCACTACTACACAAAAGA
CAGACCCGGCCGTACACACTGACGCCAAAAGGCCGACATTCTCCAAAAAT
GTCGACCCTCACGTTGAAGATGGTAAAATGAAGACCATCCCGGTCGAATC
CCATAGCATGGGACCCAAAAACCGACTCAGCCAAAGCACAGTAGCCTGGA
TCACTGGTGGAATTTGCGTTGGTTCAATCGCCCTTATTTTAACACTAGCC
TGTGGTTTTTACTTTCTGAGAAAAAGGTACAGCGGCCAGTTTTCCGCTCA
GTACAAAGCTGCCGCGGCCGCGCGTGGAATCTATCAAGATATGGTTCCGG
TCGACTATCATGCTACATACCAAGGACAACAGCCTAATGGACATCCAAAA
CGACCAAAGGCTAGTGTTATCCTGTAATATATTTAGACTGGAAGCGTTAA
GAATGAAACCAAGCACTGTCATTTCATCTCCAGGATTTTTTGTTACTTGA
TTACAAATGCATGGAAAGAAAAGGTGGACAGCAAGGACTGGTGTTAGATA
CGGAGTTCAAACTATTTTGATGCGGAATTAACCGATTTCCGTATGAAGAA
GAACTAAAGAAAACAAGAAGAAGAAGCTCTATCCAGTATTTTGTTTAAGA
TAGCTGTGAAAAGAAGGGCGCGGACTGTGAATGGGGTTGTAATGAATTCG
CCGGAGGAAATGTGATATTTCAATAGGGTGGAATTCAAaaaatctacaat
cagtgacgaaatacttggcacaaaagggaaatccaccgggaagttttaaa
accacaatcgatttgcaagtgctctaaagtaggttcgaagggtagagttt
taactctgagttttaacttaagacttaggaccttaggatctgaggagcca
aaagttcaaaaatggtccagtagggcttgaaatattgcctagaaaccaat
aaatccctcccagatagaaataatcgatgaaatcaagttgaaggcctgaa
attgacattctcgttcgaacttcaattttcgaaaaataggaaattagcca
aaagtgccaatatgttatggcactgattgtagatattAAATATATATTGA
TTAGGACGTGTGTGCGTTAAAACgaccctgtgtcacagacccggtaggaa
aCCCCGCCCGATGGGAAATTTGGCAAATGTTTGGTTCGGTGGGG
Run BLAST on NCBI

protein sequence of TCONS_00007470-protein

>TCONS_00007470-protein ID=TCONS_00007470-protein|Name=TCONS_00007470-protein|organism=Clytia hemisphaerica|type=polypeptide|length=488bp
MNFNRMPRCLLLLKLFLIGSIQASSIFSANEINIYNGDDYTSHSFVEYPQ
WVDPTIKDNTEALKVGTLEFKFKTNSRSCILLFANDGITSNGETERNQLQ
LSLVQAGGLKAEFNMGHMDEKSSKEVTIGNRWNDMEWHHVIVTRNYRQVT
VYIDGEEGVMVSFGDEDHLKLTAHVRIGGFETSSGFSGCIKDVKYGSGSG
TKVQYPRNTKGKVREGCFTECPRNIRNKCKNGGECMRYFDPDDECKNCQC
DCSLTGFSGETCSLEDPIGYLQDKQYITTITESLRSSRVNHVQFRFRTNQ
PSGLILFHGKSSEYLLIELVDGNIELEMSLETDKISLRLGSGQFHNGEWH
SVLVKRQGDKVMLKVDQRTVEKVFKYTPQLTCEGQHSKFLFIGGHQNPNS
LPKRLNGRKNFNGCLQQVFFKVDGRYQNEERDILQRSSYSNRFRVEGGAI
NTNSCPVFEQYIRPVEPTTTTTATQKTDPAVHTDXRSC
Run BLAST on NCBI

transcript from alignment at sc0000077:449218..458370+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007470 ID=TCONS_00007470|Name=TCONS_00007470|organism=Clytia hemisphaerica|type=transcript|length=9153bp|location=Sequence derived from alignment at sc0000077:449218..458370+ (Clytia hemisphaerica)
ttttgatgtttttagggGCGAGCATAAAAAAGGGGTTAGTCTTTTCACAG
TAAAAACATATACATCATAAAAAGTAagcaaaaaatttataattattttc
ttcattcattttttttcattctttttttctatcAGAGTGGAACATTTTCG
ATTATTTTATTTCTAGATCTAGGGAAACTTTCAAGGCCTAAAATACAGTT
TGTCCCAAAAAAGGGGacacatttttatataaagtaaagtCCTCATATTC
Tatgccaaattttatgactcaaaaacctttaaattattttgggaattgaa
tatcgattgattgaaaattatataatcttatttcaattattccGAGACCA
GTTTAGATATTAAGTTTTGAGGATTTAACTTTGTATAAAAACGTGTCCGA
ttttttcgggacacactgTTAGTGGAAAAGTTAATGATTGagttattttg
aagaatttctaGGCTTATAATTTTGACAACAGGATGGCATTTTTTGATTT
ACGTCCAAACGCTTGATCTGCGCGcccagtggtttgcgtgaatgcgtaaa
tgggctttttcacttcgtgaatgcgtgaaaatttaaaaaatgcgCGAATT
CACGTAGAGTTTTAAGACTTTGCGCGAACAGAAATTGCGAAAAAAATGCG
TGAGtttggaaaataatttgtgTGATTTTGTGACTTAAAGGTCTGGGGAA
GGGCGGGCTCGTCTACATTGTCCTATTCACGTTGTCTTTGCTACGATGAA
AGAACATAGTGTATCATACCTGTTTATGACTGGCttttatatttatttca
ttttaaacTTCATACTTTAGATTTTCATTTGGTGAGGATCGATTGAAGCC
TAATCAAATTTATTCCATCGTGGAAATTAACTTTCGACTGCTCCAGCAAT
GAATTTTAACAGAATGCCAAGATGTTTACTGTTACTCAAACTGTTTCTCA
TTGGTTCGATCCAAGCCTCTTCCATATTTTCAGCCAATGAGATCAATATT
TATAACGGTGATGATTATACGTCACATTCTTTTGTGGAGTACCCACAATG
GGTTGATCCGACCATCAAAGACAATACCGAAGCTCTCAAAGTGGGTACAT
TAGAATTCAAATTTAAAACCAATTCAAGAAGttgtattttattgttcgcA
AATGATGGAATCACTTCAAATGGCGAAACTGAGAGAAATCAACTTCAATT
GAGTTTAGTCCAAGCGGGCGGACTGAAGGCGGAATTCAATATGGGTCACA
TGGACGAGAAAAGTAGTAAAGAGGTTACCATAGGCAACCGTTGGAATGAT
ATGGAATGGCACCATGtgatagtgacacgaaattatCGGCAAGTCACCGT
TTATATAGATGGCGAGGAAGGTGTGATGGTGTCTTTTGGAGATGAAGATC
ATTTGAAATTGACAGCTCATGTCCGAATTGGTGGATTCGAAACTTCCAGT
GGGTAAGTGTTCTGATGTTCTGTGTTCTGTGttctgatacacgtttttta
taagaacaaactaaataagaacATACAGTTTTAAAGACCAAAGCATTAAG
ACTTTACGGTCtccaaaacacccaatttttaaggagaatggacaaaaata
ctcacacagtgaaaataagaacatgttaagaacatttttaggcttataat
tcagttaagaacatccaaaggtttAACAAAAattggatgttcttttaaaa
aaacgtgtatcgaaAGTCTATATACTGACAAAGCAGAATCAATAATAgag
tttctcaaaatttgttttcgGGGAGAAATTTGTTcaatcttttgtttaaa
aacgcTGTGTAAAAAGCAAGTTGTTGGAAGTGCGTAAAAAGTTTAAGTAC
ATTTCATTGTGCACACTTGCTTTATAAATGCTCTTCTTTTACAAACTaga
taccgttgaaaagataattcagagcactataattttcgagaaaacttaaa
gaaagaaaataaagatcTAAAATgaggaggaagaaaaaaaaaagctcGCT
CAattcgaaaaagtgaaaaatgttctgcgttttttttttctcgaaaacaT
TGTAAAGCTCaataaaaatgtttcttttaatGTTTCTTTCCATTCCTCCA
GTTTCAGTGGCTGCATCAAGGACGTCAAATATGGTTCCGGAAGTGGAACC
AAAGTTCAATACCCAAGAAACACAAAGGGTAAAGTCCGGGAAGGTTGTTT
TACGGAATGTCCTAGAAACATCCGGAACAAGTGTAAAAATGGTGGAGAAT
GTATGCGGTATTTCGATCCTGATGACGAGTGCAAGAATTGTCAATGTGAT
TGTTCGTTGACTGGATTTTCTGGGGAAACGTGCTCTCTTGAAGGTAAGGC
AGGATTCTTTTGTGATTCTTTTATGatcatgtggaaaccactcATGTGGG
aacctagactagagtctacttctgactgagcttggctttctgatgatttt
gatggcgctgagtccagtgaagtagactagagtaTATAGCTATCTTGGAT
GTTTTTCACtttaaaaattataagaaaacaacaaaacaataaaatatatt
ctaaaatcaaattttatgaaactacaataaaaacatgaaaatacctccaa
attttgaaaaagattggtTCAATGGTCATggttttatgtttatttttctc
taaaaagggactggatctagtggcatgtatttgctaccacctcaagcaaa
gcgAAAAAATCAAGTCGGCCAAATTACAACTCTCTGTCTTGCTCTCGCTC
AAAGCTAGCAACCTCCGTCAGTCATTCTAAAATTTAATTCAACATCAAAA
CTTAAAAGTTCCAACAGAAAGTCTTAATTGCTGATAGTATTTAGAGAAGT
TTAAACAAGCTGGCTGTGCCCAAAAAAATCTGATTAACATTTGGGTCAGT
GTGGTTGTGAGTAAGGGCGTTTTGCAGGTCCTTCTTGAATGCCCGAAAGG
CGGGCTCCGAATATTTTCATAAAGAACGCGAACCAAGAGGTTTCAGCGAT
CCGAAGTGATCTACATACAAGCGCTTGTAGAGCTCTAgaacttttttaga
aatttttattcttaGATCCGATTGGCTATTTGCAAGACAAACAATACATC
ACAACAATTACTGAGTCATTACGTTCATCACGTGTCAATCACGTGCAATT
TCGGTTCCGTACAAACCAACCGTCCGGTTTGATTTTATTTCACGGAAAAA
GTTCGGAATATTTGTTGATTGAACTTGTGGACGGGAATATTGAATTGGAA
ATGTCTCTTGAAACTGGTAAGTTTAAAAAGTTTCTCGTTCCTATCTCACA
CTACCCAGAACCACTTGCAACACATTTGATTTTTCTGATGGGCGTTGGTC
CCTTTCGCGAGTGCTATCAGAATCATCGAAAAGCGAGCTAAGGAACCTTG
ATTTTAGTATCCCTCCAAAAAGAATTTGCACTTCTTTTAAAGTCGGACCC
TTCTTATATGAATGTGTTTTTTTCGACGGACGACATTCACTCCAGGGATG
ATTGACGGCTTTGTGTTTTTTTCAACGGACGACATTCACTCCAGGGATGA
TTGACGGCTTTGAGTTTTTTTCGACGGACGACATTCACTCCAGGGATGAT
TGACGGctttgagtttttttcaacGGACGACATTCACTCCAGGGATGATT
GACGGCTTTGAGTTTTTTTCGACGGACGACATTCACTCCAGGGATGATTG
ACGGctttgagtttttttcaacGGACGACATTCACTCCAGCGTTGATTGA
CGGctttgagtttttttcaacGGACGACATTCACTCCAGGGATGATTGAC
GGctttgagtttttttcaacGGACGACATTCACTCCAGGGTTGATTGTCG
GCTTTGAGTTTTTTTCGACGGACGACATTCACTCCAGGGATGATTGACAG
ctttgagtttttttcaacGGACGACATTCACTCCAGGGTTGATTGACGGC
TTTGAGTTTTTTTCGACGGACGACATTCACTCCAGGGATGATTGACGGCT
TTGAGTTTTTTTCGACGGACGACATTCACTCCAGGGATGATTGACGGCTT
TGAGTTTTTTCAACGGACGACATTCACTCCAGGGATGATTGACGGctttg
agtttttttcaacGGACGACATTCACTCCAGGGATGATTGACGGctttga
gtttttttcaacGGACGACATTCACTCCAGGGATGATTGACGGCTTTGAG
TTTGTAAAAACCTTCGAAATAAGGATACAATTTGGTTTGATTGACGACTA
GCTTCTCATTACAGAGGATGCCCGCTTCTGTATTGAGTGGTCTAAGAGTC
GTCTCGTTAGAACCGTCTTACGCTGCAGTTTACACTGCCTGCCAGTTTGC
GAGACACTGAGAAACAGTTTTTTGGATCATAGTATTTTCTTATACTATGT
TTTGATCAAGCGCATTAATCTGGCGTGAACCACTAAGGAGCAATACACTC
TCACCTTATCCACGATGTATTGTGGAATCGATAACTACCATACAGTCACC
GACAGGCttcttgagtttctgtctacccaattcccctcacgtGGCATGGG
TCGGCCCGGGCAAAGGTACgctcacttgccaagtgaatcacagcACCGCG
AGTgggataaaaaacttttttcgctagaagatgagcagaagcctacccGA
CCTCCTTCACGGCAGTCAAGATTGATAGCACTACACTACTGCACCTCATA
CGATTTAGGGGCTTACAAACGACAAAATGGCTCTGTCATAAACTGGATGC
TGAGTCCCAAATTTCACCACATCTTCTATTTCAGACAAAATTTCATTACG
ACTGGGTAGCGGTCAATTTCACAATGGGGAATGGCACTCAGTGTTGGTCA
AACGACAAGGAGATAAAGTTATGTTAAAAGTCGATCAAAGGTAAAAGGGT
TTCACGTGGCTTTCCATAGTTTCTTGTGTCTTATGGAGAAAATTATTTGG
ATTACAGTCTTTGGTCCGGGAAAACAATTTTGTCACAGCTTGGCTTTAAT
TGAACGGGGAAATTATATCAACGGGTGACAATGTACATACTGCATAAAAT
CTTGATGTGTCCCGAATTgtccgtagcatgaaggtagagcgtCTAGCTAC
GGTGCACAGGGTCCTAGGTTCAATCCACGGCTTGGTCAAACCAAAGACTT
AAATGTTACTTGAAGCCTCTCTGTTTGGATCAAGACCTTTTGACTAAAAC
CTTTCTCGAAGTAAGAAAAGATGGAACCTtaagatttgcactgcatttGA
AATCAAGAATTTagacttttctttgcttttacttggcttatttttttaat
ctggttttactttcaatctggcgtttgtatGGAAACGACATGCGTCACTT
GttttggatggaaaataagtggcttcatatCCCATCCTAGATATTCAAAT
CTAGACTCTTCGGGACTTTTGAATCAATGTTTTTCCCTTTTCAGAACCGT
AGAGAAAGTGTTCAAATACACACCTCAATTAACGTGTGAAGGACAACACA
GCAAGTTCTTATTCATTGGTGGACATCAGAATCCTAACTCACTTCCGAAA
CGTTTGAATGGACGAAAGAACTTCAATGGGTGTTTGCAACAAGTATTTTT
CAAGGTAGAAGAAAAATCTAAATGCTCTTTTCGATCATATTTAAATGTAA
TTGCCGGCATTATTTATTTAAATCGCATACTAacaatggctgcgtttaga
ccagcctggcatttgtaattgcttgcagtattcttttgaattctattgtt
ccgcgcaattgttcagtttgtcaaatgcctaatgatgtcAGCATGTTGGC
ATtacgttggcatttgaaatgccattttgagcaaaggaatccccttttct
ggcatttcaaatcaaacaaaggaaccaaaacaaagagaaaaaatgNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNaatgccatgacagaaaatacaatggaaaag
ctattacaatcgaatccctcatgagcaaatgccaaattacaaatgccagt
tggtctaaacgcagccaatgTAGCAAAAATAGTTGATGAAATTTCTACCC
TCAAAGgtcttttttccaattttttttcaaatcctttTCATAAGGGTTGG
ACTACCCTTGACCCTTTATCTTACTATATAGGGGAATTAGCCAAAAAATC
AACCGAACCGAACTTTGTCCTTGAATTTACTCACATTCAgtacattttca
ggatttttcatAAGCTAAAAAGTTGTTCAGCTTTCAATCtgcgatcgatt
gatatataaaACTTGCATATTTGGACAActtgaattttgaccaaagtatG
TGACAGTCATcattgattatgacgtcataactggGGATGCCAAGGTGCTG
AAGGTGGGGGGTTTTAATGTGGGTTTCCTGGTTTCTTtataaaatcttaa
atttacaaaaaaaagcaTAATGCTAACCATAGCTCTAAGCTGGGAAAACT
CAtcattcaaatttattttgcaaatggAATCAATGAAATAGAGAGATTTC
ACGAATTTTTCAACTTAAACACGacgttttgaaatattttcgtaAGCATA
TGAGGACTAAACATATTTAGGactgaaaattaaattttgctaaGCATGAA
TAACCTTATCTCGAATATCCAGTATATAAAGCAAAAAGAGTTCAGCTGAa
tgctttactttttttctacgACTCGAACTAAGTATTGATTGTTGATTTTC
TATGAATTTCATTCCCTTGGTTTTTCAGGTTGACGGTCGTTACCAAAACG
AAGAGCGCGACATCTTACAACGATCAAGTTACAGCAACCGGTTTCGTGTG
GAAGGTGGAGCCATCAACACAAATTCTTGTCCAGTCTTTGAACAATATAT
TCGTAAGTCTGAGTGGAGTTCATAaagattttcataaattatgtcacGAA
CATTACTTGCCTCGTAATCAATCAATTacccatggtgattatgtcccttg
agacattttgagatttttttttcatgaatagaaagtagttttaatgtttt
aatataatccactgggagttaatcaccatggcaataatttcaagacgagg
caagtgatgttcgtgacgtaatttatgaaaaggtctattcttcgCCACGG
CATGACGACAGAACTGGGGTACAACAGAACACTTACTTAAGATTAATTAT
GTGTTTTcagtaaacataatcttttagtgagttaaaccatagtgtttgtt
ttaccctcgaaattattaaatcttattggttgaaaaagatgtcacatgac
tttccgttgcaaaaaattcataaagatTTTCTTATCAAGTTGAATTTCGG
TTTTTATGTTGCATCGAGTCTTAGAAATATCATGGAGGCTAGCATGGTTT
CCAAAAGTTAACCTTTGGCTTGATTTTCCAGAAAGTTCTCATAAGCTACA
GTGCGAGTCTTACGCCGGGTACTTTTTGATCTATTCTATTGCCATCATCG
AAAGATTCAATGTTTTACTATTGTAGTTAGCTTGCTACTGTTAGGATGTC
ACTTGGAATCGCTTTACTCTTTTACTATTTATAATTCTATTTTTTAGGTC
CCGTTGAACCAACAACGACAACCACTGCTACACAAAAGACAGACCCAGCC
GTACACACTGACANTAGGTCCTGTTGAACCAACAACGACAGTCACTACTA
CACAAAAGACAGACCCGGCCGTACACACTGACGCCAAAAGGCCGACATTC
TCCAAAAATGTCGACCCTCACGTTGAAGATGGTAAAATGAAGACCATCCC
GGTCGAATCCCATAGCATGGGACCCAAAAACCGACTCAGCCAAAGCACAG
TAGCCTGGATCACTGGTGGAATTTGCGTTGGTTCAATCGCCCTTATTTTA
ACACTAGCCTGTGGTTTTTACTTTCTGAGAAAAAGGTACAGCGGCCAGTT
TTCCGCTCAGTACAAAGCTGCCGCGGCCGCGCGTGGAATCTATCAAGATA
TGGTTCCGGTCGACTATCATGCTACATACCAAGGACAACAGCCTAATGGA
CATCCAAAACGACCAAAGGCTAGTGTTATCCTGTAATATATTTAGACTGG
AAGCGTTAAGAATGAAACCAAGCACTGTCATTTCATCTCCAGGATTTTTT
GTTACTTGATTACAAATGCATGGAAAGAAAAGGTGGACAGCAAGGACTGG
TGTTAGATACGGAGTTCAAACTATTTTGATGCGGAATTAACCGATTTCCG
TATGAAGAAGAACTAAAGAAAACAAGAAGAAGAAGCTCTATCCAGTATTT
TGTTTAAGATAGCTGTGAAAAGAAGGGCGCGGACTGTGAATGGGGTTGTA
ATGAATTCGCCGGAGGAAATGTGATATTTCAATAGGGTGGAATTCAAaaa
atctacaatcagtgacgaaatacttggcacaaaagggaaatccaccggga
agttttaaaaccacaatcgatttgcaagtgctctaaagtaggttcgaagg
gtagagttttaactctgagttttaacttaagacttaggaccttaggatct
gaggagccaaaagttcaaaaatggtccagtagggcttgaaatattgccta
gaaaccaataaatccctcccagatagaaataatcgatgaaatcaagttga
aggcctgaaattgacattctcgttcgaacttcaattttcgaaaaatagga
aattagccaaaagtgccaatatgttatggcactgattgtagatattAAAT
ATATATTGATTAGGACGTGTGTGCGTTAAAACgaccctgtgtcacagacc
cggtaggaaaCCCCGCCCGATGGGAAATTTGGCAAATGTTTGGTTCGGTG
GGG

Coding sequence (CDS) from alignment at sc0000077:449218..458370+

>TCONS_00007470 ID=TCONS_00007470|Name=TCONS_00007470|organism=Clytia hemisphaerica|type=CDS|length=10269bp|location=Sequence derived from alignment at sc0000077:449218..458370+ (Clytia hemisphaerica)
ATGAATTTTAACAGAATGCCAAGATGTTTACTGTTACTCAAACTGTTTCT
CATTGGTTCGATCCAAGCCTCTTCCATATTTTCAGCCAATGAGATCAATA
TTTATAACGGTGATGATTATACGTCACATTCTTTTGTGGAGTACCCACAA
TGGGTTGATCCGACCATCAAAGACAATACCGAAGCTCTCAAAGTGGGTAC
ATTAGAATTCAAATTTAAAACCAATTCAAGAAGttgtattttattgttcg
cAAATGATGGAATCACTTCAAATGGCGAAACTGAGAGAAATCAACTTCAA
TTGAGTTTAGTCCAAGCGGGCGGACTGAAGGCGGAATTCAATATGGGTCA
CATGGACGAGAAAAGTAGTAAAGAGGTTACCATAGGCAACCGTTGGAATG
ATATGGAATGGCACCATGtgatagtgacacgaaattatCGGCAAGTCACC
GTTTATATAGATGGCGAGGAAGGTGTGATGGTGTCTTTTGGAGATGAAGA
TCATTTGAAATTGACAGCTCATGTCCGAATTGGTGGATTCGAAACTTCCA
GTGGTTTCAGTGGCTGCATCAAGGACGTCAAATATGGTTCCGGAAGTGGA
ACCAAAGTTCAATACCCAAGAAACACAAAGGGTAAAGTCCGGGAAGGTTG
TTTTACGGAATGTCCTAGAAACATCCGGAACAAGTGTAAAAATGGTGGAG
AATGTATGCGGTATTTCGATCCTGATGACGAGTGCAAGAATTGTCAATGT
GATTGTTCGTTGACTGGATTTTCTGGGGAAACGTGCTCTCTTGAAGATCC
GATTGGCTATTTGCAAGACAAACAATACATCACAACAATTACTGAGTCAT
TACGTTCATCACGTGTCAATCACGTGCAATTTCGGTTCCGTACAAACCAA
CCGTCCGGTTTGATTTTATTTCACGGAAAAAGTTCGGAATATTTGTTGAT
TGAACTTGTGGACGGGAATATTGAATTGGAAATGTCTCTTGAAACTGACA
AAATTTCATTACGACTGGGTAGCGGTCAATTTCACAATGGGGAATGGCAC
TCAGTGTTGGTCAAACGACAAGGAGATAAAGTTATGTTAAAAGTCGATCA
AAGAACCGTAGAGAAAGTGTTCAAATACACACCTCAATTAACGTGTGAAG
GACAACACAGCAAGTTCTTATTCATTGGTGGACATCAGAATCCTAACTCA
CTTCCGAAACGTTTGAATGGACGAAAGAACTTCAATGGGTGTTTGCAACA
AGTATTTTTCAAGGTTGACGGTCGTTACCAAAACGAAGAGCGCGACATCT
TACAACGATCAAGTTACAGCAACCGGTTTCGTGTGGAAGGTGGAGCCATC
AACACAAATTCTTGTCCAGTCTTTGAACAATATATTCGTCCCGTTGAACC
AACAACGACAACCACTGCTACACAAAAGACAGACCCAGCCGTACACACTG
ACANTAGGTCCTGTTGAATGAATTTTAACAGAATGCCAAGATGTTTACTG
TTACTCAAACTGTTTCTCATTGGTTCGATCCAAGCCTCTTCCATATTTTC
AGCCAATGAGATCAATATTTATAACGGTGATGATTATACGTCACATTCTT
TTGTGGAGTACCCACAATGGGTTGATCCGACCATCAAAGACAATACCGAA
GCTCTCAAAGTGGGTACATTAGAATTCAAATTTAAAACCAATTCAAGAAG
ttgtattttattgttcgcAAATGATGGAATCACTTCAAATGGCGAAACTG
AGAGAAATCAACTTCAATTGAGTTTAGTCCAAGCGGGCGGACTGAAGGCG
GAATTCAATATGGGTCACATGGACGAGAAAAGTAGTAAAGAGGTTACCAT
AGGCAACCGTTGGAATGATATGGAATGGCACCATGtgatagtgacacgaa
attatCGGCAAGTCACCGTTTATATAGATGGCGAGGAAGGTGTGATGGTG
TCTTTTGGAGATGAAGATCATTTGAAATTGACAGCTCATGTCCGAATTGG
TGGATTCGAAACTTCCAGTGGTTTCAGTGGCTGCATCAAGGACGTCAAAT
ATGGTTCCGGAAGTGGAACCAAAGTTCAATACCCAAGAAACACAAAGGGT
AAAGTCCGGGAAGGTTGTTTTACGGAATGTCCTAGAAACATCCGGAACAA
GTGTAAAAATGGTGGAGAATGTATGCGGTATTTCGATCCTGATGACGAGT
GCAAGAATTGTCAATGTGATTGTTCGTTGACTGGATTTTCTGGGGAAACG
TGCTCTCTTGAAGATCCGATTGGCTATTTGCAAGACAAACAATACATCAC
AACAATTACTGAGTCATTACGTTCATCACGTGTCAATCACGTGCAATTTC
GGTTCCGTACAAACCAACCGTCCGGTTTGATTTTATTTCACGGAAAAAGT
TCGGAATATTTGTTGATTGAACTTGTGGACGGGAATATTGAATTGGAAAT
GTCTCTTGAAACTGACAAAATTTCATTACGACTGGGTAGCGGTCAATTTC
ACAATGGGGAATGGCACTCAGTGTTGGTCAAACGACAAGGAGATAAAGTT
ATGTTAAAAGTCGATCAAAGAACCGTAGAGAAAGTGTTCAAATACACACC
TCAATTAACGTGTGAAGGACAACACAGCAAGTTCTTATTCATTGGTGGAC
ATCAGAATCCTAACTCACTTCCGAAACGTTTGAATGGACGAAAGAACTTC
AATGGGTGTTTGCAACAAGTATTTTTCAAGGTTGACGGTCGTTACCAAAA
CGAAGAGCGCGACATCTTACAACGATCAAGTTACAGCAACCGGTTTCGTG
TGGAAGGTGGAGCCATCAACACAAATTCTTGTCCAGTCTTTGAACAATAT
ATTCGTCCCGTTGAACCAACAACGACAACCACTGCTACACAAAAGACAGA
CCCAGCCGTACACACTGACANTAGGTCCTGTTGAATGAATTTTAACAGAA
TGCCAAGATGTTTACTGTTACTCAAACTGTTTCTCATTGGTTCGATCCAA
GCCTCTTCCATATTTTCAGCCAATGAGATCAATATTTATAACGGTGATGA
TTATACGTCACATTCTTTTGTGGAGTACCCACAATGGGTTGATCCGACCA
TCAAAGACAATACCGAAGCTCTCAAAGTGGGTACATTAGAATTCAAATTT
AAAACCAATTCAAGAAGttgtattttattgttcgcAAATGATGGAATCAC
TTCAAATGGCGAAACTGAGAGAAATCAACTTCAATTGAGTTTAGTCCAAG
CGGGCGGACTGAAGGCGGAATTCAATATGGGTCACATGGACGAGAAAAGT
AGTAAAGAGGTTACCATAGGCAACCGTTGGAATGATATGGAATGGCACCA
TGtgatagtgacacgaaattatCGGCAAGTCACCGTTTATATAGATGGCG
AGGAAGGTGTGATGGTGTCTTTTGGAGATGAAGATCATTTGAAATTGACA
GCTCATGTCCGAATTGGTGGATTCGAAACTTCCAGTGGTTTCAGTGGCTG
CATCAAGGACGTCAAATATGGTTCCGGAAGTGGAACCAAAGTTCAATACC
CAAGAAACACAAAGGGTAAAGTCCGGGAAGGTTGTTTTACGGAATGTCCT
AGAAACATCCGGAACAAGTGTAAAAATGGTGGAGAATGTATGCGGTATTT
CGATCCTGATGACGAGTGCAAGAATTGTCAATGTGATTGTTCGTTGACTG
GATTTTCTGGGGAAACGTGCTCTCTTGAAGATCCGATTGGCTATTTGCAA
GACAAACAATACATCACAACAATTACTGAGTCATTACGTTCATCACGTGT
CAATCACGTGCAATTTCGGTTCCGTACAAACCAACCGTCCGGTTTGATTT
TATTTCACGGAAAAAGTTCGGAATATTTGTTGATTGAACTTGTGGACGGG
AATATTGAATTGGAAATGTCTCTTGAAACTGACAAAATTTCATTACGACT
GGGTAGCGGTCAATTTCACAATGGGGAATGGCACTCAGTGTTGGTCAAAC
GACAAGGAGATAAAGTTATGTTAAAAGTCGATCAAAGAACCGTAGAGAAA
GTGTTCAAATACACACCTCAATTAACGTGTGAAGGACAACACAGCAAGTT
CTTATTCATTGGTGGACATCAGAATCCTAACTCACTTCCGAAACGTTTGA
ATGGACGAAAGAACTTCAATGGGTGTTTGCAACAAGTATTTTTCAAGGTT
GACGGTCGTTACCAAAACGAAGAGCGCGACATCTTACAACGATCAAGTTA
CAGCAACCGGTTTCGTGTGGAAGGTGGAGCCATCAACACAAATTCTTGTC
CAGTCTTTGAACAATATATTCGTCCCGTTGAACCAACAACGACAACCACT
GCTACACAAAAGACAGACCCAGCCGTACACACTGACANTAGGTCCTGTTG
AATGAATTTTAACAGAATGCCAAGATGTTTACTGTTACTCAAACTGTTTC
TCATTGGTTCGATCCAAGCCTCTTCCATATTTTCAGCCAATGAGATCAAT
ATTTATAACGGTGATGATTATACGTCACATTCTTTTGTGGAGTACCCACA
ATGGGTTGATCCGACCATCAAAGACAATACCGAAGCTCTCAAAGTGGGTA
CATTAGAATTCAAATTTAAAACCAATTCAAGAAGttgtattttattgttc
gcAAATGATGGAATCACTTCAAATGGCGAAACTGAGAGAAATCAACTTCA
ATTGAGTTTAGTCCAAGCGGGCGGACTGAAGGCGGAATTCAATATGGGTC
ACATGGACGAGAAAAGTAGTAAAGAGGTTACCATAGGCAACCGTTGGAAT
GATATGGAATGGCACCATGtgatagtgacacgaaattatCGGCAAGTCAC
CGTTTATATAGATGGCGAGGAAGGTGTGATGGTGTCTTTTGGAGATGAAG
ATCATTTGAAATTGACAGCTCATGTCCGAATTGGTGGATTCGAAACTTCC
AGTGGTTTCAGTGGCTGCATCAAGGACGTCAAATATGGTTCCGGAAGTGG
AACCAAAGTTCAATACCCAAGAAACACAAAGGGTAAAGTCCGGGAAGGTT
GTTTTACGGAATGTCCTAGAAACATCCGGAACAAGTGTAAAAATGGTGGA
GAATGTATGCGGTATTTCGATCCTGATGACGAGTGCAAGAATTGTCAATG
TGATTGTTCGTTGACTGGATTTTCTGGGGAAACGTGCTCTCTTGAAGATC
CGATTGGCTATTTGCAAGACAAACAATACATCACAACAATTACTGAGTCA
TTACGTTCATCACGTGTCAATCACGTGCAATTTCGGTTCCGTACAAACCA
ACCGTCCGGTTTGATTTTATTTCACGGAAAAAGTTCGGAATATTTGTTGA
TTGAACTTGTGGACGGGAATATTGAATTGGAAATGTCTCTTGAAACTGAC
AAAATTTCATTACGACTGGGTAGCGGTCAATTTCACAATGGGGAATGGCA
CTCAGTGTTGGTCAAACGACAAGGAGATAAAGTTATGTTAAAAGTCGATC
AAAGAACCGTAGAGAAAGTGTTCAAATACACACCTCAATTAACGTGTGAA
GGACAACACAGCAAGTTCTTATTCATTGGTGGACATCAGAATCCTAACTC
ACTTCCGAAACGTTTGAATGGACGAAAGAACTTCAATGGGTGTTTGCAAC
AAGTATTTTTCAAGGTTGACGGTCGTTACCAAAACGAAGAGCGCGACATC
TTACAACGATCAAGTTACAGCAACCGGTTTCGTGTGGAAGGTGGAGCCAT
CAACACAAATTCTTGTCCAGTCTTTGAACAATATATTCGTCCCGTTGAAC
CAACAACGACAACCACTGCTACACAAAAGACAGACCCAGCCGTACACACT
GACANTAGGTCCTGTTGAATGAATTTTAACAGAATGCCAAGATGTTTACT
GTTACTCAAACTGTTTCTCATTGGTTCGATCCAAGCCTCTTCCATATTTT
CAGCCAATGAGATCAATATTTATAACGGTGATGATTATACGTCACATTCT
TTTGTGGAGTACCCACAATGGGTTGATCCGACCATCAAAGACAATACCGA
AGCTCTCAAAGTGGGTACATTAGAATTCAAATTTAAAACCAATTCAAGAA
GttgtattttattgttcgcAAATGATGGAATCACTTCAAATGGCGAAACT
GAGAGAAATCAACTTCAATTGAGTTTAGTCCAAGCGGGCGGACTGAAGGC
GGAATTCAATATGGGTCACATGGACGAGAAAAGTAGTAAAGAGGTTACCA
TAGGCAACCGTTGGAATGATATGGAATGGCACCATGtgatagtgacacga
aattatCGGCAAGTCACCGTTTATATAGATGGCGAGGAAGGTGTGATGGT
GTCTTTTGGAGATGAAGATCATTTGAAATTGACAGCTCATGTCCGAATTG
GTGGATTCGAAACTTCCAGTGGTTTCAGTGGCTGCATCAAGGACGTCAAA
TATGGTTCCGGAAGTGGAACCAAAGTTCAATACCCAAGAAACACAAAGGG
TAAAGTCCGGGAAGGTTGTTTTACGGAATGTCCTAGAAACATCCGGAACA
AGTGTAAAAATGGTGGAGAATGTATGCGGTATTTCGATCCTGATGACGAG
TGCAAGAATTGTCAATGTGATTGTTCGTTGACTGGATTTTCTGGGGAAAC
GTGCTCTCTTGAAGATCCGATTGGCTATTTGCAAGACAAACAATACATCA
CAACAATTACTGAGTCATTACGTTCATCACGTGTCAATCACGTGCAATTT
CGGTTCCGTACAAACCAACCGTCCGGTTTGATTTTATTTCACGGAAAAAG
TTCGGAATATTTGTTGATTGAACTTGTGGACGGGAATATTGAATTGGAAA
TGTCTCTTGAAACTGACAAAATTTCATTACGACTGGGTAGCGGTCAATTT
CACAATGGGGAATGGCACTCAGTGTTGGTCAAACGACAAGGAGATAAAGT
TATGTTAAAAGTCGATCAAAGAACCGTAGAGAAAGTGTTCAAATACACAC
CTCAATTAACGTGTGAAGGACAACACAGCAAGTTCTTATTCATTGGTGGA
CATCAGAATCCTAACTCACTTCCGAAACGTTTGAATGGACGAAAGAACTT
CAATGGGTGTTTGCAACAAGTATTTTTCAAGGTTGACGGTCGTTACCAAA
ACGAAGAGCGCGACATCTTACAACGATCAAGTTACAGCAACCGGTTTCGT
GTGGAAGGTGGAGCCATCAACACAAATTCTTGTCCAGTCTTTGAACAATA
TATTCGTCCCGTTGAACCAACAACGACAACCACTGCTACACAAAAGACAG
ACCCAGCCGTACACACTGACANTAGGTCCTGTTGAATGAATTTTAACAGA
ATGCCAAGATGTTTACTGTTACTCAAACTGTTTCTCATTGGTTCGATCCA
AGCCTCTTCCATATTTTCAGCCAATGAGATCAATATTTATAACGGTGATG
ATTATACGTCACATTCTTTTGTGGAGTACCCACAATGGGTTGATCCGACC
ATCAAAGACAATACCGAAGCTCTCAAAGTGGGTACATTAGAATTCAAATT
TAAAACCAATTCAAGAAGttgtattttattgttcgcAAATGATGGAATCA
CTTCAAATGGCGAAACTGAGAGAAATCAACTTCAATTGAGTTTAGTCCAA
GCGGGCGGACTGAAGGCGGAATTCAATATGGGTCACATGGACGAGAAAAG
TAGTAAAGAGGTTACCATAGGCAACCGTTGGAATGATATGGAATGGCACC
ATGtgatagtgacacgaaattatCGGCAAGTCACCGTTTATATAGATGGC
GAGGAAGGTGTGATGGTGTCTTTTGGAGATGAAGATCATTTGAAATTGAC
AGCTCATGTCCGAATTGGTGGATTCGAAACTTCCAGTGGTTTCAGTGGCT
GCATCAAGGACGTCAAATATGGTTCCGGAAGTGGAACCAAAGTTCAATAC
CCAAGAAACACAAAGGGTAAAGTCCGGGAAGGTTGTTTTACGGAATGTCC
TAGAAACATCCGGAACAAGTGTAAAAATGGTGGAGAATGTATGCGGTATT
TCGATCCTGATGACGAGTGCAAGAATTGTCAATGTGATTGTTCGTTGACT
GGATTTTCTGGGGAAACGTGCTCTCTTGAAGATCCGATTGGCTATTTGCA
AGACAAACAATACATCACAACAATTACTGAGTCATTACGTTCATCACGTG
TCAATCACGTGCAATTTCGGTTCCGTACAAACCAACCGTCCGGTTTGATT
TTATTTCACGGAAAAAGTTCGGAATATTTGTTGATTGAACTTGTGGACGG
GAATATTGAATTGGAAATGTCTCTTGAAACTGACAAAATTTCATTACGAC
TGGGTAGCGGTCAATTTCACAATGGGGAATGGCACTCAGTGTTGGTCAAA
CGACAAGGAGATAAAGTTATGTTAAAAGTCGATCAAAGAACCGTAGAGAA
AGTGTTCAAATACACACCTCAATTAACGTGTGAAGGACAACACAGCAAGT
TCTTATTCATTGGTGGACATCAGAATCCTAACTCACTTCCGAAACGTTTG
AATGGACGAAAGAACTTCAATGGGTGTTTGCAACAAGTATTTTTCAAGGT
TGACGGTCGTTACCAAAACGAAGAGCGCGACATCTTACAACGATCAAGTT
ACAGCAACCGGTTTCGTGTGGAAGGTGGAGCCATCAACACAAATTCTTGT
CCAGTCTTTGAACAATATATTCGTCCCGTTGAACCAACAACGACAACCAC
TGCTACACAAAAGACAGACCCAGCCGTACACACTGACANTAGGTCCTGTT
GAATGAATTTTAACAGAATGCCAAGATGTTTACTGTTACTCAAACTGTTT
CTCATTGGTTCGATCCAAGCCTCTTCCATATTTTCAGCCAATGAGATCAA
TATTTATAACGGTGATGATTATACGTCACATTCTTTTGTGGAGTACCCAC
AATGGGTTGATCCGACCATCAAAGACAATACCGAAGCTCTCAAAGTGGGT
ACATTAGAATTCAAATTTAAAACCAATTCAAGAAGttgtattttattgtt
cgcAAATGATGGAATCACTTCAAATGGCGAAACTGAGAGAAATCAACTTC
AATTGAGTTTAGTCCAAGCGGGCGGACTGAAGGCGGAATTCAATATGGGT
CACATGGACGAGAAAAGTAGTAAAGAGGTTACCATAGGCAACCGTTGGAA
TGATATGGAATGGCACCATGtgatagtgacacgaaattatCGGCAAGTCA
CCGTTTATATAGATGGCGAGGAAGGTGTGATGGTGTCTTTTGGAGATGAA
GATCATTTGAAATTGACAGCTCATGTCCGAATTGGTGGATTCGAAACTTC
CAGTGGTTTCAGTGGCTGCATCAAGGACGTCAAATATGGTTCCGGAAGTG
GAACCAAAGTTCAATACCCAAGAAACACAAAGGGTAAAGTCCGGGAAGGT
TGTTTTACGGAATGTCCTAGAAACATCCGGAACAAGTGTAAAAATGGTGG
AGAATGTATGCGGTATTTCGATCCTGATGACGAGTGCAAGAATTGTCAAT
GTGATTGTTCGTTGACTGGATTTTCTGGGGAAACGTGCTCTCTTGAAGAT
CCGATTGGCTATTTGCAAGACAAACAATACATCACAACAATTACTGAGTC
ATTACGTTCATCACGTGTCAATCACGTGCAATTTCGGTTCCGTACAAACC
AACCGTCCGGTTTGATTTTATTTCACGGAAAAAGTTCGGAATATTTGTTG
ATTGAACTTGTGGACGGGAATATTGAATTGGAAATGTCTCTTGAAACTGA
CAAAATTTCATTACGACTGGGTAGCGGTCAATTTCACAATGGGGAATGGC
ACTCAGTGTTGGTCAAACGACAAGGAGATAAAGTTATGTTAAAAGTCGAT
CAAAGAACCGTAGAGAAAGTGTTCAAATACACACCTCAATTAACGTGTGA
AGGACAACACAGCAAGTTCTTATTCATTGGTGGACATCAGAATCCTAACT
CACTTCCGAAACGTTTGAATGGACGAAAGAACTTCAATGGGTGTTTGCAA
CAAGTATTTTTCAAGGTTGACGGTCGTTACCAAAACGAAGAGCGCGACAT
CTTACAACGATCAAGTTACAGCAACCGGTTTCGTGTGGAAGGTGGAGCCA
TCAACACAAATTCTTGTCCAGTCTTTGAACAATATATTCGTCCCGTTGAA
CCAACAACGACAACCACTGCTACACAAAAGACAGACCCAGCCGTACACAC
TGACANTAGGTCCTGTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004213XLOC_004213Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007470-proteinTCONS_00007470-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007470-exon-sc0000077-1491911889:449218..449290TCONS_00007470-exon-sc0000077-1491911889:449218..449290Clytia hemisphaericaexon
TCONS_00007470-exon-sc0000077-1510915933:449218..449290TCONS_00007470-exon-sc0000077-1510915933:449218..449290Clytia hemisphaericaexon
TCONS_00007470-exon-sc0000077-1575043694:449218..449290TCONS_00007470-exon-sc0000077-1575043694:449218..449290Clytia hemisphaericaexon
TCONS_00007470-exon-sc0000077-1491911889:450038..450669TCONS_00007470-exon-sc0000077-1491911889:450038..450669Clytia hemisphaericaexon
TCONS_00007470-exon-sc0000077-1510915933:450038..450669TCONS_00007470-exon-sc0000077-1510915933:450038..450669Clytia hemisphaericaexon
TCONS_00007470-exon-sc0000077-1575043694:450038..450669TCONS_00007470-exon-sc0000077-1575043694:450038..450669Clytia hemisphaericaexon
TCONS_00007470-exon-sc0000077-1491911889:451319..451560TCONS_00007470-exon-sc0000077-1491911889:451319..451560Clytia hemisphaericaexon
TCONS_00007470-exon-sc0000077-1510915933:451319..451560TCONS_00007470-exon-sc0000077-1510915933:451319..451560Clytia hemisphaericaexon
TCONS_00007470-exon-sc0000077-1575043694:451319..451560TCONS_00007470-exon-sc0000077-1575043694:451319..451560Clytia hemisphaericaexon
TCONS_00007470-exon-sc0000077-1491911889:452283..452483TCONS_00007470-exon-sc0000077-1491911889:452283..452483Clytia hemisphaericaexon
TCONS_00007470-exon-sc0000077-1510915933:452283..452483TCONS_00007470-exon-sc0000077-1510915933:452283..452483Clytia hemisphaericaexon
TCONS_00007470-exon-sc0000077-1575043694:452283..452483TCONS_00007470-exon-sc0000077-1575043694:452283..452483Clytia hemisphaericaexon
TCONS_00007470-exon-sc0000077-1491911889:454002..454107TCONS_00007470-exon-sc0000077-1491911889:454002..454107Clytia hemisphaericaexon
TCONS_00007470-exon-sc0000077-1510915933:454002..454107TCONS_00007470-exon-sc0000077-1510915933:454002..454107Clytia hemisphaericaexon
TCONS_00007470-exon-sc0000077-1575043694:454002..454107TCONS_00007470-exon-sc0000077-1575043694:454002..454107Clytia hemisphaericaexon
TCONS_00007470-exon-sc0000077-1491911889:454662..454821TCONS_00007470-exon-sc0000077-1491911889:454662..454821Clytia hemisphaericaexon
TCONS_00007470-exon-sc0000077-1510915933:454662..454821TCONS_00007470-exon-sc0000077-1510915933:454662..454821Clytia hemisphaericaexon
TCONS_00007470-exon-sc0000077-1575043694:454662..454821TCONS_00007470-exon-sc0000077-1575043694:454662..454821Clytia hemisphaericaexon
TCONS_00007470-exon-sc0000077-1491911889:456296..456419TCONS_00007470-exon-sc0000077-1491911889:456296..456419Clytia hemisphaericaexon
TCONS_00007470-exon-sc0000077-1510915933:456296..456419TCONS_00007470-exon-sc0000077-1510915933:456296..456419Clytia hemisphaericaexon
TCONS_00007470-exon-sc0000077-1575043694:456296..456419TCONS_00007470-exon-sc0000077-1575043694:456296..456419Clytia hemisphaericaexon
TCONS_00007470-exon-sc0000077-1491911889:457115..458370TCONS_00007470-exon-sc0000077-1491911889:457115..458370Clytia hemisphaericaexon
TCONS_00007470-exon-sc0000077-1510915933:457115..458370TCONS_00007470-exon-sc0000077-1510915933:457115..458370Clytia hemisphaericaexon
TCONS_00007470-exon-sc0000077-1575043694:457115..458370TCONS_00007470-exon-sc0000077-1575043694:457115..458370Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000077supercontigsc0000077:449218..458370 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.612654	0.457709	0.426934	0.500974	0.418671	0.343045	0.818248	0.99704	1.90954	1.83197	1.77459	1.71821	7.5329	5.96981	0.739964	0.729793	5.33157	5.66737	11.46	16.7291	9.57506	8.61852	3.12599	4.14213	6.6232	7.19587	0.72819	0.493583	0.48018	0.628539
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001791Laminin_G
IPR013320ConA-like_dom
Blast
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BLAST of TCONS_00007470 vs. Swiss-Prot (Human)
Match: NRX3A (Neurexin-3 OS=Homo sapiens GN=NRXN3 PE=1 SV=4)

HSP 1 Score: 107.457 bits (267), Expect = 2.002e-23
Identity = 104/389 (26.74%), Postives = 174/389 (44.73%), Query Frame = 2 
Query:  353 LEFKFKTNSRSCILLFANDGITSNGETERNQLQLSLVQAGGLKAEFNMGHMDEKSSKEVTIGNRWNDMEWHHVIVTRNYRQVTVYIDGEEGVMVSFGDEDHLKLTAHVRIGGFETS--------------SGFSGCIKDVKYGSGSGTKVQYPRNTKGKVREGCFTECPRNIRNKCKNGGECMRYFDPDDECKNCQCDCSLTGFSGETCS---LEDP---------------IGYLQDKQYIT-TITESLRSSRVNHVQFRFRTNQPSGLILFHGKSSEYLLIELVDGNIELEMSLETDKIS--LRLGSGQFHNGEWHSVLVKRQGDKVMLKVDQRTVEKVFKYTPQLTCEGQHSKFLFIGGHQNPNSLPKRLNGRKNFNGCLQQVFFK 1414
            L F+FKTN  + +LL+ +DG   +       L LSLV  G ++  F+M    + +   V    + ND  WH ++V+R+  +  + +DGE           ++ + + + +GG  T                GF G I D+KYG+ S  ++   R  +    EG   E P      C+NGG C    D      +  CDCS TG+ G+ CS    +DP               +   +  +Y+   ++++   S  + +   F+T Q +GLIL  GKS++Y+ + L DG + L ++L +      +   +G+F++  WH V V R   +V + VD   +     YT +         F ++GG  +   LP       NF GCL++V +K
Sbjct:   51 LSFQFKTNVSTGLLLYLDDGGVCD------FLCLSLVD-GRVQLRFSM----DCAETAVLSNKQVNDSSWHFLMVSRDRLRTVLMLDGEGQSGELQPQRPYMDVVSDLFLGGVPTDIRPSALTLDGVQAMPGFKGLILDLKYGN-SEPRLLGSRGVQMDA-EGPCGERP------CENGGICF-LLD-----GHPTCDCSTTGYGGKLCSEDVSQDPGLSHLMMSEQAREENVATFRGSEYLCYDLSQNPIQSSSDEITLSFKTWQRNGLILHTGKSADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFNDNAWHDVKVTRNLRQVTISVDG--ILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGS-PVSNNFMGCLKEVVYK 411

HSP 2 Score: 88.9669 bits (219), Expect = 8.564e-18
Identity = 86/382 (22.51%), Postives = 154/382 (40.31%), Query Frame = 2 
Query:  272 TSHSFVEYPQWVDPTIKDNTEALKVGTLEFKFKTNSRSCILLFANDGIT--SNGETERNQLQLSLVQAGGLKAEFNMGHMDEKSSKEVTIGNRWNDMEWHHVIVTRNYRQVTVYIDGEEGVMVSFGDEDHLKLTAHVRIGGFETSS----------------GFSGCIKDVKYGSGSGTKVQYP--RNTKGKVREGCFTECPRNIRN-KCKNGGECMRYFDPDDECKNCQCDCSLTGFSGETCSLEDPIGYLQDKQYITTITESLRSSRVNHVQFRFRTNQPSGLILFHGK--SSEYLLIELVDGNIELEMSLETDKISLRLGSG--------QFHNGEWHSVLVKRQGDKVMLKVDQRTVEKVFKYTPQLTCEGQHSKFLF 1324
            T  +++  P+W       NT+  ++G++ F F+T   + ++LF +       +  +++N               + +  M   + K      + ND EW+HV + R+ R  T+ ++       + G+ + L L   + +GG   +                 G+ GCI+D+     S    Q    +N  G V+  C     +   +  CKN   C       D      CDC+ TG+ G TC  E  I       Y+  I   +  +    V FRF + +  GL++      S++ L +EL  G ++L ++L+  +I+     G        + ++ EWH+V V R+G  + L VD    E         T  G H++  F
Sbjct:  453 TPEAYISLPKW-------NTK--RMGSISFDFRTTEPNGLILFTHGKPQERKDARSQKNTKVDFFAVELLDGNLYLLLDMGSGTIKVKATQKKANDGEWYHVDIQRDGRSGTISVNSRRTPFTASGESEILDLEGDMYLGGLPENRAGLILPTELWTAMLNYGYVGCIRDLFIDGRSKNIRQLAEMQNAAG-VKSSCSRMSAKQCDSYPCKNNAVC------KDGWNRFICDCTGTGYWGRTCEREASILSYDGSMYMKIIMPMVMHTEAEDVSFRFMSQRAYGLLVATTSRDSADTLRLELDGGRVKLMVNLDCIRINCNSSKGPETLYAGQKLNDNEWHTVRVVRRGKSLKLTVDDDVAEG--------TMVGDHTRLEF 810
The following BLAST results are available for this feature:
BLAST of TCONS_00007470 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NRX3A2.002e-2326.74Neurexin-3 OS=Homo sapiens GN=NRXN3 PE=1 SV=4[more]
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