XLOC_004213 (gene) - C. hemisphaerica

Overview
NameXLOC_004213
Unique NameXLOC_004213
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000077:449218..458370+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004213 ID=XLOC_004213|Name=XLOC_004213|organism=Clytia hemisphaerica|type=gene|length=9153bp|location=Sequence derived from alignment at sc0000077:449218..458370+ (Clytia hemisphaerica)
ttttgatgtttttagggGCGAGCATAAAAAAGGGGTTAGTCTTTTCACAG TAAAAACATATACATCATAAAAAGTAagcaaaaaatttataattattttc ttcattcattttttttcattctttttttctatcAGAGTGGAACATTTTCG ATTATTTTATTTCTAGATCTAGGGAAACTTTCAAGGCCTAAAATACAGTT TGTCCCAAAAAAGGGGacacatttttatataaagtaaagtCCTCATATTC Tatgccaaattttatgactcaaaaacctttaaattattttgggaattgaa tatcgattgattgaaaattatataatcttatttcaattattccGAGACCA GTTTAGATATTAAGTTTTGAGGATTTAACTTTGTATAAAAACGTGTCCGA ttttttcgggacacactgTTAGTGGAAAAGTTAATGATTGagttattttg aagaatttctaGGCTTATAATTTTGACAACAGGATGGCATTTTTTGATTT ACGTCCAAACGCTTGATCTGCGCGcccagtggtttgcgtgaatgcgtaaa tgggctttttcacttcgtgaatgcgtgaaaatttaaaaaatgcgCGAATT CACGTAGAGTTTTAAGACTTTGCGCGAACAGAAATTGCGAAAAAAATGCG TGAGtttggaaaataatttgtgTGATTTTGTGACTTAAAGGTCTGGGGAA GGGCGGGCTCGTCTACATTGTCCTATTCACGTTGTCTTTGCTACGATGAA AGAACATAGTGTATCATACCTGTTTATGACTGGCttttatatttatttca ttttaaacTTCATACTTTAGATTTTCATTTGGTGAGGATCGATTGAAGCC TAATCAAATTTATTCCATCGTGGAAATTAACTTTCGACTGCTCCAGCAAT GAATTTTAACAGAATGCCAAGATGTTTACTGTTACTCAAACTGTTTCTCA TTGGTTCGATCCAAGCCTCTTCCATATTTTCAGCCAATGAGATCAATATT TATAACGGTGATGATTATACGTCACATTCTTTTGTGGAGTACCCACAATG GGTTGATCCGACCATCAAAGACAATACCGAAGCTCTCAAAGTGGGTACAT TAGAATTCAAATTTAAAACCAATTCAAGAAGttgtattttattgttcgcA AATGATGGAATCACTTCAAATGGCGAAACTGAGAGAAATCAACTTCAATT GAGTTTAGTCCAAGCGGGCGGACTGAAGGCGGAATTCAATATGGGTCACA TGGACGAGAAAAGTAGTAAAGAGGTTACCATAGGCAACCGTTGGAATGAT ATGGAATGGCACCATGtgatagtgacacgaaattatCGGCAAGTCACCGT TTATATAGATGGCGAGGAAGGTGTGATGGTGTCTTTTGGAGATGAAGATC ATTTGAAATTGACAGCTCATGTCCGAATTGGTGGATTCGAAACTTCCAGT GGGTAAGTGTTCTGATGTTCTGTGTTCTGTGttctgatacacgtttttta taagaacaaactaaataagaacATACAGTTTTAAAGACCAAAGCATTAAG ACTTTACGGTCtccaaaacacccaatttttaaggagaatggacaaaaata ctcacacagtgaaaataagaacatgttaagaacatttttaggcttataat tcagttaagaacatccaaaggtttAACAAAAattggatgttcttttaaaa aaacgtgtatcgaaAGTCTATATACTGACAAAGCAGAATCAATAATAgag tttctcaaaatttgttttcgGGGAGAAATTTGTTcaatcttttgtttaaa aacgcTGTGTAAAAAGCAAGTTGTTGGAAGTGCGTAAAAAGTTTAAGTAC ATTTCATTGTGCACACTTGCTTTATAAATGCTCTTCTTTTACAAACTaga taccgttgaaaagataattcagagcactataattttcgagaaaacttaaa gaaagaaaataaagatcTAAAATgaggaggaagaaaaaaaaaagctcGCT CAattcgaaaaagtgaaaaatgttctgcgttttttttttctcgaaaacaT TGTAAAGCTCaataaaaatgtttcttttaatGTTTCTTTCCATTCCTCCA GTTTCAGTGGCTGCATCAAGGACGTCAAATATGGTTCCGGAAGTGGAACC AAAGTTCAATACCCAAGAAACACAAAGGGTAAAGTCCGGGAAGGTTGTTT TACGGAATGTCCTAGAAACATCCGGAACAAGTGTAAAAATGGTGGAGAAT GTATGCGGTATTTCGATCCTGATGACGAGTGCAAGAATTGTCAATGTGAT TGTTCGTTGACTGGATTTTCTGGGGAAACGTGCTCTCTTGAAGGTAAGGC AGGATTCTTTTGTGATTCTTTTATGatcatgtggaaaccactcATGTGGG aacctagactagagtctacttctgactgagcttggctttctgatgatttt gatggcgctgagtccagtgaagtagactagagtaTATAGCTATCTTGGAT GTTTTTCACtttaaaaattataagaaaacaacaaaacaataaaatatatt ctaaaatcaaattttatgaaactacaataaaaacatgaaaatacctccaa attttgaaaaagattggtTCAATGGTCATggttttatgtttatttttctc taaaaagggactggatctagtggcatgtatttgctaccacctcaagcaaa gcgAAAAAATCAAGTCGGCCAAATTACAACTCTCTGTCTTGCTCTCGCTC AAAGCTAGCAACCTCCGTCAGTCATTCTAAAATTTAATTCAACATCAAAA CTTAAAAGTTCCAACAGAAAGTCTTAATTGCTGATAGTATTTAGAGAAGT TTAAACAAGCTGGCTGTGCCCAAAAAAATCTGATTAACATTTGGGTCAGT GTGGTTGTGAGTAAGGGCGTTTTGCAGGTCCTTCTTGAATGCCCGAAAGG CGGGCTCCGAATATTTTCATAAAGAACGCGAACCAAGAGGTTTCAGCGAT CCGAAGTGATCTACATACAAGCGCTTGTAGAGCTCTAgaacttttttaga aatttttattcttaGATCCGATTGGCTATTTGCAAGACAAACAATACATC ACAACAATTACTGAGTCATTACGTTCATCACGTGTCAATCACGTGCAATT TCGGTTCCGTACAAACCAACCGTCCGGTTTGATTTTATTTCACGGAAAAA GTTCGGAATATTTGTTGATTGAACTTGTGGACGGGAATATTGAATTGGAA ATGTCTCTTGAAACTGGTAAGTTTAAAAAGTTTCTCGTTCCTATCTCACA CTACCCAGAACCACTTGCAACACATTTGATTTTTCTGATGGGCGTTGGTC CCTTTCGCGAGTGCTATCAGAATCATCGAAAAGCGAGCTAAGGAACCTTG ATTTTAGTATCCCTCCAAAAAGAATTTGCACTTCTTTTAAAGTCGGACCC TTCTTATATGAATGTGTTTTTTTCGACGGACGACATTCACTCCAGGGATG ATTGACGGCTTTGTGTTTTTTTCAACGGACGACATTCACTCCAGGGATGA TTGACGGCTTTGAGTTTTTTTCGACGGACGACATTCACTCCAGGGATGAT TGACGGctttgagtttttttcaacGGACGACATTCACTCCAGGGATGATT GACGGCTTTGAGTTTTTTTCGACGGACGACATTCACTCCAGGGATGATTG ACGGctttgagtttttttcaacGGACGACATTCACTCCAGCGTTGATTGA CGGctttgagtttttttcaacGGACGACATTCACTCCAGGGATGATTGAC GGctttgagtttttttcaacGGACGACATTCACTCCAGGGTTGATTGTCG GCTTTGAGTTTTTTTCGACGGACGACATTCACTCCAGGGATGATTGACAG ctttgagtttttttcaacGGACGACATTCACTCCAGGGTTGATTGACGGC TTTGAGTTTTTTTCGACGGACGACATTCACTCCAGGGATGATTGACGGCT TTGAGTTTTTTTCGACGGACGACATTCACTCCAGGGATGATTGACGGCTT TGAGTTTTTTCAACGGACGACATTCACTCCAGGGATGATTGACGGctttg agtttttttcaacGGACGACATTCACTCCAGGGATGATTGACGGctttga gtttttttcaacGGACGACATTCACTCCAGGGATGATTGACGGCTTTGAG TTTGTAAAAACCTTCGAAATAAGGATACAATTTGGTTTGATTGACGACTA GCTTCTCATTACAGAGGATGCCCGCTTCTGTATTGAGTGGTCTAAGAGTC GTCTCGTTAGAACCGTCTTACGCTGCAGTTTACACTGCCTGCCAGTTTGC GAGACACTGAGAAACAGTTTTTTGGATCATAGTATTTTCTTATACTATGT TTTGATCAAGCGCATTAATCTGGCGTGAACCACTAAGGAGCAATACACTC TCACCTTATCCACGATGTATTGTGGAATCGATAACTACCATACAGTCACC GACAGGCttcttgagtttctgtctacccaattcccctcacgtGGCATGGG TCGGCCCGGGCAAAGGTACgctcacttgccaagtgaatcacagcACCGCG AGTgggataaaaaacttttttcgctagaagatgagcagaagcctacccGA CCTCCTTCACGGCAGTCAAGATTGATAGCACTACACTACTGCACCTCATA CGATTTAGGGGCTTACAAACGACAAAATGGCTCTGTCATAAACTGGATGC TGAGTCCCAAATTTCACCACATCTTCTATTTCAGACAAAATTTCATTACG ACTGGGTAGCGGTCAATTTCACAATGGGGAATGGCACTCAGTGTTGGTCA AACGACAAGGAGATAAAGTTATGTTAAAAGTCGATCAAAGGTAAAAGGGT TTCACGTGGCTTTCCATAGTTTCTTGTGTCTTATGGAGAAAATTATTTGG ATTACAGTCTTTGGTCCGGGAAAACAATTTTGTCACAGCTTGGCTTTAAT TGAACGGGGAAATTATATCAACGGGTGACAATGTACATACTGCATAAAAT CTTGATGTGTCCCGAATTgtccgtagcatgaaggtagagcgtCTAGCTAC GGTGCACAGGGTCCTAGGTTCAATCCACGGCTTGGTCAAACCAAAGACTT AAATGTTACTTGAAGCCTCTCTGTTTGGATCAAGACCTTTTGACTAAAAC CTTTCTCGAAGTAAGAAAAGATGGAACCTtaagatttgcactgcatttGA AATCAAGAATTTagacttttctttgcttttacttggcttatttttttaat ctggttttactttcaatctggcgtttgtatGGAAACGACATGCGTCACTT GttttggatggaaaataagtggcttcatatCCCATCCTAGATATTCAAAT CTAGACTCTTCGGGACTTTTGAATCAATGTTTTTCCCTTTTCAGAACCGT AGAGAAAGTGTTCAAATACACACCTCAATTAACGTGTGAAGGACAACACA GCAAGTTCTTATTCATTGGTGGACATCAGAATCCTAACTCACTTCCGAAA CGTTTGAATGGACGAAAGAACTTCAATGGGTGTTTGCAACAAGTATTTTT CAAGGTAGAAGAAAAATCTAAATGCTCTTTTCGATCATATTTAAATGTAA TTGCCGGCATTATTTATTTAAATCGCATACTAacaatggctgcgtttaga ccagcctggcatttgtaattgcttgcagtattcttttgaattctattgtt ccgcgcaattgttcagtttgtcaaatgcctaatgatgtcAGCATGTTGGC ATtacgttggcatttgaaatgccattttgagcaaaggaatccccttttct ggcatttcaaatcaaacaaaggaaccaaaacaaagagaaaaaatgNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNaatgccatgacagaaaatacaatggaaaag ctattacaatcgaatccctcatgagcaaatgccaaattacaaatgccagt tggtctaaacgcagccaatgTAGCAAAAATAGTTGATGAAATTTCTACCC TCAAAGgtcttttttccaattttttttcaaatcctttTCATAAGGGTTGG ACTACCCTTGACCCTTTATCTTACTATATAGGGGAATTAGCCAAAAAATC AACCGAACCGAACTTTGTCCTTGAATTTACTCACATTCAgtacattttca ggatttttcatAAGCTAAAAAGTTGTTCAGCTTTCAATCtgcgatcgatt gatatataaaACTTGCATATTTGGACAActtgaattttgaccaaagtatG TGACAGTCATcattgattatgacgtcataactggGGATGCCAAGGTGCTG AAGGTGGGGGGTTTTAATGTGGGTTTCCTGGTTTCTTtataaaatcttaa atttacaaaaaaaagcaTAATGCTAACCATAGCTCTAAGCTGGGAAAACT CAtcattcaaatttattttgcaaatggAATCAATGAAATAGAGAGATTTC ACGAATTTTTCAACTTAAACACGacgttttgaaatattttcgtaAGCATA TGAGGACTAAACATATTTAGGactgaaaattaaattttgctaaGCATGAA TAACCTTATCTCGAATATCCAGTATATAAAGCAAAAAGAGTTCAGCTGAa tgctttactttttttctacgACTCGAACTAAGTATTGATTGTTGATTTTC TATGAATTTCATTCCCTTGGTTTTTCAGGTTGACGGTCGTTACCAAAACG AAGAGCGCGACATCTTACAACGATCAAGTTACAGCAACCGGTTTCGTGTG GAAGGTGGAGCCATCAACACAAATTCTTGTCCAGTCTTTGAACAATATAT TCGTAAGTCTGAGTGGAGTTCATAaagattttcataaattatgtcacGAA CATTACTTGCCTCGTAATCAATCAATTacccatggtgattatgtcccttg agacattttgagatttttttttcatgaatagaaagtagttttaatgtttt aatataatccactgggagttaatcaccatggcaataatttcaagacgagg caagtgatgttcgtgacgtaatttatgaaaaggtctattcttcgCCACGG CATGACGACAGAACTGGGGTACAACAGAACACTTACTTAAGATTAATTAT GTGTTTTcagtaaacataatcttttagtgagttaaaccatagtgtttgtt ttaccctcgaaattattaaatcttattggttgaaaaagatgtcacatgac tttccgttgcaaaaaattcataaagatTTTCTTATCAAGTTGAATTTCGG TTTTTATGTTGCATCGAGTCTTAGAAATATCATGGAGGCTAGCATGGTTT CCAAAAGTTAACCTTTGGCTTGATTTTCCAGAAAGTTCTCATAAGCTACA GTGCGAGTCTTACGCCGGGTACTTTTTGATCTATTCTATTGCCATCATCG AAAGATTCAATGTTTTACTATTGTAGTTAGCTTGCTACTGTTAGGATGTC ACTTGGAATCGCTTTACTCTTTTACTATTTATAATTCTATTTTTTAGGTC CCGTTGAACCAACAACGACAACCACTGCTACACAAAAGACAGACCCAGCC GTACACACTGACANTAGGTCCTGTTGAACCAACAACGACAGTCACTACTA CACAAAAGACAGACCCGGCCGTACACACTGACGCCAAAAGGCCGACATTC TCCAAAAATGTCGACCCTCACGTTGAAGATGGTAAAATGAAGACCATCCC GGTCGAATCCCATAGCATGGGACCCAAAAACCGACTCAGCCAAAGCACAG TAGCCTGGATCACTGGTGGAATTTGCGTTGGTTCAATCGCCCTTATTTTA ACACTAGCCTGTGGTTTTTACTTTCTGAGAAAAAGGTACAGCGGCCAGTT TTCCGCTCAGTACAAAGCTGCCGCGGCCGCGCGTGGAATCTATCAAGATA TGGTTCCGGTCGACTATCATGCTACATACCAAGGACAACAGCCTAATGGA CATCCAAAACGACCAAAGGCTAGTGTTATCCTGTAATATATTTAGACTGG AAGCGTTAAGAATGAAACCAAGCACTGTCATTTCATCTCCAGGATTTTTT GTTACTTGATTACAAATGCATGGAAAGAAAAGGTGGACAGCAAGGACTGG TGTTAGATACGGAGTTCAAACTATTTTGATGCGGAATTAACCGATTTCCG TATGAAGAAGAACTAAAGAAAACAAGAAGAAGAAGCTCTATCCAGTATTT TGTTTAAGATAGCTGTGAAAAGAAGGGCGCGGACTGTGAATGGGGTTGTA ATGAATTCGCCGGAGGAAATGTGATATTTCAATAGGGTGGAATTCAAaaa atctacaatcagtgacgaaatacttggcacaaaagggaaatccaccggga agttttaaaaccacaatcgatttgcaagtgctctaaagtaggttcgaagg gtagagttttaactctgagttttaacttaagacttaggaccttaggatct gaggagccaaaagttcaaaaatggtccagtagggcttgaaatattgccta gaaaccaataaatccctcccagatagaaataatcgatgaaatcaagttga aggcctgaaattgacattctcgttcgaacttcaattttcgaaaaatagga aattagccaaaagtgccaatatgttatggcactgattgtagatattAAAT ATATATTGATTAGGACGTGTGTGCGTTAAAACgaccctgtgtcacagacc cggtaggaaaCCCCGCCCGATGGGAAATTTGGCAAATGTTTGGTTCGGTG GGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00007470TCONS_00007470Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00007470-proteinTCONS_00007470-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000077supercontigsc0000077:449218..458370 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.61 0.46 0.43 0.5 0.42 0.34 0.82 1 1.91 1.83 1.77 1.72 7.53 5.97 0.74 0.73 5.33 5.67 11.46 16.73 9.58 8.62 3.13 4.14 6.62 7.2 0.73 0.49 0.48 0.63