TCONS_00006692-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00006692-protein
Unique NameTCONS_00006692-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length133

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00006692-protein ID=TCONS_00006692-protein|Name=TCONS_00006692-protein|organism=Clytia hemisphaerica|type=polypeptide|length=133bp
MFFQNQEDSPVSPTTAAKSFKEKKSFASRKRDADSVKDLHPDKLPLIIER
YKHEKALPMLDKIKFLVPFDMTVGTLTSIIRKRLQLNSSQALFILFDNKN
IFSASGALLDIYRDQKDEDGFLYIIYASQETFG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003743XLOC_003743Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00006692TCONS_00006692Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004241Atg8-like
IPR029071Ubiquitin-rel_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.20.90coord: 13..132
e-value: 1.4E-36
score: 124.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
IPR004241Autophagy protein Atg8 ubiquitin-likePFAMPF02991Atg8coord: 29..133
e-value: 5.9E-35
score: 119.5
IPR029071Ubiquitin-related domainSUPERFAMILY54236Ubiquitin-likecoord: 18..133

Blast
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BLAST of TCONS_00006692-protein vs. Swiss-Prot (Human)
Match: MLP3A (Microtubule-associated proteins 1A/1B light chain 3A OS=Homo sapiens GN=MAP1LC3A PE=1 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 3.049e-44
Identity = 63/116 (54.31%), Postives = 86/116 (74.14%), Query Frame = 0 
Query:   18 KSFKEKKSFASRKRDADSVKDLHPDKLPLIIERYKHEKALPMLDKIKFLVPFDMTVGTLTSIIRKRLQLNSSQALFILFDNKNIFSASGALLDIYRDQKDEDGFLYIIYASQETFG 133
            + FK+++SFA R ++   ++D HP K+P+IIERYK EK LP+LDK KFLVP  + +  L  IIR+RLQLN +QA F+L +  ++ S S  + DIY  +KDEDGFLY++YASQETFG
Sbjct:    5 RPFKQRRSFADRCKEVQQIRDQHPSKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETFG 120
The following BLAST results are available for this feature:
BLAST of TCONS_00006692-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MLP3A3.049e-4454.31Microtubule-associated proteins 1A/1B light chain ... [more]
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