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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00006692 ID=TCONS_00006692|Name=TCONS_00006692|organism=Clytia hemisphaerica|type=transcript|length=1138bp aattttcactgctttgtaaaattttcaaactacCTGATGACCTGAttttg ctatactttacttttcaGAAAGAAGGTAACAAGAAACAAATCTTTACAGT TATTTCCAAATATGTTCTTCCAGAATCAAGAAGACTCTCCTGTTTCTCCT ACTACAGCTGCAAAAtcatttaaagaaaagaaatcttttGcTTCTCGAAA ACGTGATGCAGACTCAGTTAAAGATCTTCACCCAGACAAATTACCAcTCA TTATTGAAAGATATAAGCATGAAAAAGCTTTGCCCATGTTGGACAAGATA AAATTTCTGGTTCCTTTTGATATGACTGTTGGTACCCTAACTAGTATTAT AAGGAAAAGATTACAATTAAACTCTTCGCAGGCATTATTTATACTGTTCG ACAATAAAAACATCTTCAGCGCATCTGGCGCTCTGTTAGACATTTATCGA GATCAAAAGGATGAAGATGGTTTTCTCTATATTATTTATGCATCCCAAGA GACTTTCGGATGATGTTTGGCTTTTCATGATGTTCTTCTGTTAAATGTTA AACGTTAAACTGAAGGGGCCTGTCCATAGATTTTATGaggcccgaagggc tagatatcttgtcacgtgacattacaaaagaatttcagcgcttgaccaat cagaagcttcgcgggtttccgaaaacaatagcagcaatatcttttgcgat attcacttttctttgcttggaagagcttaaagcactacatctagcccttc gggctttataaatctatgagcCTGTCTCATACCAAGTTGCTAACGTGAAG TTATCATAATAAATATTATAAGTCCATTCGGTTGAAAGTGTGTACTCTTT TTTTGCTATTGTGTTAAAACCATGCCAGCGTAATTAGACTTTTTCCATTG AGAGCGGTTTCCACATGGTAACAGAAAAAAGAGTGTACACCACTATTGTT AGTGAATACAGAGTAAAATAAGGTTATGTAAAGTATTCATTGTATAGACA CACTGTTTATTTTATCATAAAGAATTTTAAATGTAAATCGCTTGCATCat gcatttcaaaaatattttgcattttATAAATTAGTGAAGaaaagttttat taaaattGATCACTCTTCGAACATGCACTTTTAAGATA Run BLAST on NCBI protein sequence of TCONS_00006692-protein >TCONS_00006692-protein ID=TCONS_00006692-protein|Name=TCONS_00006692-protein|organism=Clytia hemisphaerica|type=polypeptide|length=133bp
MFFQNQEDSPVSPTTAAKSFKEKKSFASRKRDADSVKDLHPDKLPLIIER YKHEKALPMLDKIKFLVPFDMTVGTLTSIIRKRLQLNSSQALFILFDNKN IFSASGALLDIYRDQKDEDGFLYIIYASQETFG Run BLAST on NCBI transcript from alignment at sc0000069:570759..587372- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00006692 ID=TCONS_00006692|Name=TCONS_00006692|organism=Clytia hemisphaerica|type=transcript|length=16614bp|location=Sequence derived from alignment at sc0000069:570759..587372- (Clytia hemisphaerica) AATTTTCACTGCTTTGTAAAATTTTCAAACTACCTGATGACCTGATTTTG
CTATACTTTACTTTTCAGAAAGAAGGTAACAAGAAACAAATCTTTACAGT
TATTTCCAAATATGTTCTTCCAGAATCAAGAAGACTCTCCTGTTTCTCCT
ACTACAGCTGCAAAATCATTTAAAGAAAAGAAATCTTTTGGTAAGAGTTT
TTCTTGAGCTGACCTGACTGAGTAGTATTATTATAGACTATAACTGTCTA
ATGTTGACATCCCTCGTCTAAATTCGACACTCTTTTCTAGAGCTGAAAAT
AATAGAAAAGTGGAAACTATTTTTCTTTGCTTAGTGGGAAGAGAGGATAA
ATCCTTTTTCAATCACCAATTCCATCCAACTTTCATATTATATTTTAGGC
AAGGGGAATATGATGTTCTGTTTACCAGTCAGGAACAGTCGCCTTATTAG
GAGACGCCTCCTGATTAGGAGACCCGTCTCCTAATCAGGAGGTTCACGTC
TCCTAATCAGGAGACGGGTGTANNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAAAAGCCTAAAGCCC
TTAAAATTGAGATCAAAGTTTTATGTCTCCTAATTAGGAGACGGGTCTCC
TAATCAAGCGACCCCAAGCGACCTACATGTCTCCTAATCAAGAGACGTCT
CCTAATCAGGAGGCGTCTCCTAATAAGGCGACTGTTCCTGACTGTTTACC
GTCGCATTGCAAAAAATAAAAAATTTCTAAAACGCCCTTGTAGCTGCCCA
CTGCTTAAAAAAATGCCTGCCCCATTCACGGGCGTGATTGGAACCATGTT
TTTTACTCAAGGCGCACATTTAGTCAGTGTAGACCTAACTCTTCATACAA
AAATTACAAGAAACGCATATTTGGACTTTGTACCCTATGCTGCACTCAAG
CACTTGGGTCAAAATCCCGCAAAGGCGGGACAAAAATCAGTTTTTTGAAG
TTTGCAAAAAAACGCCACATAGAAGATCTTTCAAATTCAGTATGTGAATA
GAGCNNNNNNNNNNNNNNNNNNNNNNACCTAACTCTTCACACAAAAATTA
CGGGAAACGCATGTTTGGACTTTGTACCCTATGCTGCACTCAAGCACTTA
AGCCAAAGTCCCGCAAAAGCGGGACAAAAAGCAGTCTTGTGAAGTTTGCA
AAAAAACGCCACATAGAAGATCTTTCAAATTCAGTATGTGAATAAAGCAG
TAAAAAATACAACTTTTCTATTCTTCCTTTTTTTTGCAACAGTTCTAGGA
ATGAAAATAAAGGGATAATGATAATTGAATACTATCCATTGATGACCCGC
GGCACTATCGTAAAGCTAGAATTGCTTTGCGTGCTCTTCNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNGACTGAGCTGTGATAGATCATTTCGATGGAAG
TTGTTGGAATGTTTACAAGGCTCTTGACAGAAAATCGTTTGTTTTATTGT
CAATGATGACAGTGTGGTTATTAACTTTGTTATATCTGACAAATTGATGT
TTGTAAGTGCACTTTATGGTTTTGATTCCCATTGAAGAATCATATTCTGG
TTTTCATGTTATTAGATGCTGTTTTAGAGCTTTAGGTCTACACTGATAGA
GCAGTAAAAATACAACTTTTCTATTTTTCCTTTTTTTTGCAAAAGTTCTA
GTAATGAAAATAAAGGGATAATGTTAATTGAATACTATCCATTGATGATC
CGCGGCACTATCGTAAACCTAGAATCGCTTCGCGTACTCTTCGCTTGAGA
AAATGATTGACAGATTGAAGTTTTTCATCCCCGCGGTGCGCGCCGCGCGG
GAGCTCAGGCGCTCTGCGAGAATTCTCGGCTCAATCCTCGGACCGCGCTA
AAAAGGTAGACTGAGCCGTGATAGATCATTTCGATGGAAGTTGTTGGAAT
GTTTACAAGGCTCTTGACAGAATATTGTTTGTTTTATTGTCAATGATGAC
AGTGCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNTGATGTTTGTAAGTGCACTTTATAGTTTTGAT
TCCCATTGAAGAATCATATTCTGGTTTTCATGTTATTAGATGCTGTTTTA
GAGCTTTAGAGCTACACTGTTAGTTAGTGAAGATGTTATTTTTGATCCAC
TTTGAGTGTTTTGGATAGCTTGGCACAGGAAAAGAAGAAAATAATGAGTT
TTTTTAAGAAATAATGCACTTTTTTTTGCGGCGGCTCAAGAGCATGCAGG
CGGTCGACGGTAAACAGAACATCAAATTCCCCTCGCCTTATTCCTATCTC
TAAAGAAGGGTGTCGAAATTAGAAGACGGATGTCATGATTAGACCAATTT
ACGGTACCGTGAAGTCGAGTACCGTCAACTGCTCCAACTTGGGACTATCT
TACGCAACATGGGACAGCCATTCCACCACCATTTCACTGAACCTCCAAAG
TCATTTGATTTGAGTTTAATGAACCGCGTATTAAAAAATACACGATTTCT
CTTTCGATTTTACAGTATATACTGGTATATAAGTGAAAATAAAGACCAGA
TGTCAACAAGTCCCATGTTGCGTACACTCGTCCCAAGTTGGAGCAGTTGA
CGGTATAACTTGCATCAGTGGAGGGAAACTTGCATAGCCATCAAATGACT
GACCAATCAAAGCAGAAAAATTTCAAAACAAATGAACTACACAGCTCCGC
TTGCAGCTCTACTCTACCATTTTGTTTTGATTTAACTTTGTATTTTAATG
ACCAGCCAACTCATTCATTTCCAGACGGTGTCAATCGAACGAATCGAACA
CTGAATCAATTGGACGCAATTGAACACAATCGAATTGCAATAGAATATTA
CCCAGGATTTGCCGTTTGATTGCTTCGATTATGTTCGATTGCTTCGATTA
TGTTCGATTGCTTCAATTGCGTTTTATTGCTTCGATTACGTTCGATTACA
TTCGATTGATTCAATTGTATTATAGATTTTATTCATTTTCGTATGGTACT
TAAGCGCTTGGCCGCCCACGCTCAAAAGCTCTAACAAAGTGATCCAATTT
GATTTAATCGCAATCAAACTAAACAAACATATATTGTAATCAAACGAAAT
TGAAGATTAATAATAATATAATAATAATAATAATAACGAATTTTTTAAGT
GGCTGGCTCCGAAAAATTCTAGAGCTTTTAGACAGCTCAAGAATTGTTTC
CACGAAGGGCCACTACGAACAGAACAAGAACAGTAACAAAAANNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNTCAGCATCACGGCATTCCCTGGGTAGGTTATTCCAGATAGGAATTGTA
GAGCTTGCGAAGGTTTTTGCTTCAAATCTGTTTCTGTTTTGCCGTACTGC
TAAATTATTTTGAGCGGCTAATCTAGTGTAGTGGTCGTGAATGTTTCTAG
CAAGATTTACACGCTCACAAATATATTCAGGAGCAAGATTGTTAATAGCT
TTAAAAGTCATCAATGCAGAAGAATAGTCACAAAGCTGACGAAAATCTTT
ATTCATTGTGTGGACTTGATTTATCTGCCGAGAAAGAGAATCAAACTTTC
GTAATACTGCAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNGTACTAAAAGTATACTTTCAGTATATATTTTGATGTTTTAGGAAGT
ATACTTTAAGTACTAAATTTTTGGAACAATATTCCATATACTTTAAGTAT
ACTGTATGAAAGTGTACTTCATATATACTGCAAAAAAGTATAAATAAAGT
ATACTTTCATAGAAGTTGCTAGTATTAACCACATGGCCATTCAAAACACA
TTTTCAATGAAATTTGAAAAGTTCATGCCTAGGCTTATGAATTTCAAGAA
ATTTTAAAACTAAACTCTATTAATCTGATACATTGAAAGTAACAGTAAAG
TAACTTTAAGTAACATTGAAAGTAAATATTCTTAAAAGCTCTTTAGCAGA
TAAAGAAAATCTGTATCCGCACTCACACCAGGTTTAACTTAAGTTAAACT
ACCTAACTCATCATGCTGTCACAGACTGGTATAATCACAAACAAGATTCA
TTACATTCATATAGTGCACCATTAGTTTTGAATAATATACAGGTAATCTT
TATACTTACATTAGCAAGGTCGCTGCTCACCATCCATTGAACTTTACTTA
TCGTTAAAGCAAACCCTTTCATCTTCAAATTTATAAATGTTTAAAAACTT
TCAACTGTTCAAAAAATGGTCAAAAACAAATTTCTCTCACAACACCACAC
TCATTTAATGTTCTGATGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA
TGACATAGTTTCTCTGTTTTTTGAATCTGTTCCAATCAATAACAGTTTTC
GTCCTGGATGCAATTTTTTTCAGATAATCCCTTCTTTTTATTGCATCTAG
AAGCTCTTCTGTAACCCAGTGAGGGCTGGAATCGCGCAACCTCTTTTTGG
TTAAAGGAGCGTGACGATTTAATATCTCGAGGATATTTTCATTGAACTGG
GAGACAGCAGTATCAACATTGTTCGTATGGATTACTTTCGACCAATCACG
GTTTCCTAGATCATCTAGAAATGCCTCTTGGTTGAAATTTTTGAAAGATC
TGGAAGTGAGAAACCTTGGTGATTTTTGAATTTTAATTTTCGACCTTTTG
ATACAAACAAGTGAGTGGTCACTTAAACCCATGTCAATGACTTGGCACTC
AGTTGCCTCTTTACTATTTGACAGAATCAGATCAATCAAAGTAGATGAAG
TTTGAGTCACCCTGGTGGGTGATTCGACATGCTGAACTAACGATTTATCT
TTACCAACTGCTCCAACTTGCACTTGGGACTATCTGACAAAACATGGGAC
GGCAATTTGGCCACCATTTCAACAGACCTCCAAAGTCATTTAATTTGAGT
TAATGAACGGCATATTAAAAAAATACATGATTTCTTTTTTGCACCAGTAG
GCTTTTAAATCGAAATATAAAAAAAGTCTGTAGTGGAACACACGCGAATG
TCTGGAACGAAGAAGAACAAATTAGTGGCAAAACGATGGAGCGTTTGACG
TCACTCGAGCGGCAACTTACACACTTGCTAATTACTAATCCCATCGGGCG
ATCTCTAATTCTCCAATAGGCGTCCGGTCATTTTGAATGAAAGAAAAAGT
TAAAAAGGGGCGCTATCAGTGAAAGTTTTCGTGACATGTTCTGACAGAAA
GTGTGGTTGATAAACTTGGTGGAAGTATAAAAACAAATTTGTTGTCAAAG
AGATTTATATAAAAGTAAGTGAAAATACAGGCCAGATATTAAACAATCCC
ATGTTTCGACTAATCATCCTAAGTTGGAGCAGTTGACGGTAATTGACAAT
CAATCAAACCAATCTAACTTTATATGAACGCAATCGAACACAATCAAATA
TTACCCAGGAATCTTTCGTTCGATTGAGATTCGATTACCTTCAACCATTG
AATTGCAATTATTCGATTGGATTCGATTAAGTTCGATTGGTTCGATTGAG
ATCTTTGTTTGAAGCTGTTCAATTGACACCGTCTGGTCATTTGAGGGCTT
TGCATGTTAGCCTCCAATGATCCAAGTTACCCGATCTCACGGTAGTGTGT
GCACTAAAGTGGAGCGGGTGGTATTCAATAAACTGCCTGACCTCAACTGA
GCAAAAAGAAAGGAGAGAAATGCTAGGACTGCAAATTACATTTAAAAGAT
GCCTTGCACAGGCGACGCTATATTATATACATGTACCTTTGTGGCCACGT
AGTAGACCTTTTTATAGGTAGCAAGATGCGGGATGTCATTTCTAACCAGA
CAATGTTAATCATACAAGTTTGGACAAAAATCGAGAATAAACCAAAATTT
TTCAAATTCACGAGCTTCAATTTGAGTAATTTTAGCCCCCACGTTAAGTG
ATGAGATTTTAGCTCCCCCCAAGTACATAGGTCCCCCCAAAAAAAGTAGT
GTACTTCCAGCCCCCTCCTTTTTAGGGAAAAGTTTAGGGTGTAACCCCCC
CCCCAACCAGCAGGGGGGGGGCTGACACTATGTTATCTAACGATTATCCA
TCAATTAATATAGACATGATTATAGATTAATTATCGAAAAACCCTGCCGA
CGCACTGGCCAGTCTGGTGCGTTTGTCCGGTGCCAAAAAGTATCCCTCAG
CCACACCAGAAACCTCTTGTCCGGTGATAATTTTTCGAGCTTCTGGACAC
TGGAGAAAGTTTGTTTAAAAACAGTGTGCACCGGACACACCAGACTCATG
TCCTGTGTTGAGATTTCCAGTGTTAAAAGTTTTCTCATCCAACACCGGAC
TTTGTGCGTCATGTGTTAGTAAAGTCTGATGCGTCAGCAGGGTCGTGTTA
TCGATTAAAAAATGCATCGATTAGCTATTCGCTACCTTATTTTTAAAGGG
GCCTAAGTCCAGGTCCCCCCCCCAATTCTAAAAGGGCCGAAGTCCAGGTC
CCCTCCAATTCTAAGTGGGCTTAAGTCCATTTTTATGAAAATTGAGATTT
TTGTTTTTTCTGAATCTCTGGCTCACTGGCTTTCTTTTGATGTATCGAAC
ATGAAGATTTGGAGGTAAAAAAGTCTAAAAATTTTGGTCTTTAGTTTTAA
TAAAAACCACATTTAATTTTAAAAGGGCCTAAGTCCATCATGTTAGGGCC
TAAGTCCAAAGTAATTAAATTGTTGAATCTTAAAAAGGCCTAAGTCCAGA
AAGAGGGCTTAAGTCCAAACATTGATAGATTCTAGCTAATGTGAAAGGGC
CTAAGTCCATTGTTACTGTAGGTAGGGGGGGGGTCCAAACATGACTTTTT
TTGGAAATTTTTATGTTTAACCATCTTTGTAAAATTAATTTTTCATGCTG
ATTCCGAATTTGAATTCCGTTTTTCCATATCTCTTACCCCTGAGCGGCTA
CCGGAGACCCTTTTTTGGGAAAACCGCCCAAAACCGCTTAAAGTCAATTT
TTTTGAAATTTTCCATTATGAATAGCTTTCTAGTGATGTGATATCTTTTT
TAAATCAGTTTTTCATGCTGATTCCGAATCTGAAATTCATTTTGTCATAG
CTCTCACCCTTGGCCTGGTATAGGAGGCTGTTTTTTTATTAAAATTTTCG
AAACTAAGGAAAATTGATAATTTTAATAAAATGTTTCACTTTGAATGAAC
TTTGAATGAAAAATTTAATGGTAGCTACTTGTTTTAGATCAAGTTTTCAT
GCTGATTTCAAATTTCAAATTAGTTTCTGCATATCTCCTGCCACTGACCT
GCTACGGGACCGGCTACATGTGGTTCCTTATTCAGAAAATATTGCAAAAA
ATGTGCAAAAATCGATATTATTGAAAGGATATTTCTAAGCTTTTAGTTTG
TCTGTGGCTTTTTGATACTTGGCTAATGCTATACATTNTTCTAAGCTTTT
AGTTTGTCTGTGGCTTTTTGACACTTGGCTAATGTTATACATTCATCGTC
ATAGGGTGTCTTGAGTACTATATCTTTATCCAATGAGCTAACCCTTTGTA
CTGCTGCTATGAATTTATCTGCTCAACTAGTCATTAAGCAAAATTCAACC
TGCTTAGAATCTCGTTTAAACTATCTTGAGCTAGTGAACTCCTTTCAAAT
ACAATGATTCCCTAAATTAATTAAACATTGAAAAGTTGATAATTGTTTTT
ACGAAGCCTTAAAATCATTTAAGGGGTAAGTTAAATTAAAATCACTAGGC
TATACAGCTAATATATGGAATTTTTCAAATAACTTTAATTCAAACAAAGC
ATATAAGAAAAGGTTTATAGTGAATCTATAGAAAGATATATACCAATATT
TAAGAAATATAACCGATTCCTAAAGAGTAACTTCCAAACAAATGGACCGA
TATGAAAGCATTTACTGTCTCCCTGGAAAGGAGGGACGGTTTACTACTTA
GAAGTTCACAAGATAATTTAGTTTCTCAAAACTTTTTTCTAATTAACTTC
TCAAAGAACCCTTGTTTGAACAGATAGTCCGGNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATAATATTGTAATT
AAATCAACAGCTTAAGGTCTGATTTATTTTTAAAAAGCATTAGTTCTTCA
AATCTATTCAAGCAAGTATTTAAGGGATGGATAAAACAATAGCGCCTTTT
GATCGGTTCAATAAACAACTATTCAAATGTAGGATTTTTAGATTCTATCT
ATTCGGTATAAGGTCTATAAATCCCTATGATTTTCATTGTAACTTAACCT
TCCAAACAATGATATACGTCTTGTTAAAGCCAATATCAACTTTTGAATGT
CCAATGTGGACAATCATTGCATTTTGAAGAATATTTTTACCAATTTGATT
TTTACGTCTTTGATTATATTCTAAGCAGACAATTTAAAAGCAGCTCAGTC
CATAGGGTTGCATCATTGCATAAAGTACTCAAAACTCTCTGTAACAAGGA
ATGTACAACCAGATGTTTTGATAAATGGAATCCAAGTACAAGAATCTCCT
TCAAAAAATATTCATTTCAGTACATTTTTGCGATATTTTCAGAATAAGGA
ACCTCATGTAGCCGGCCCCGTAGCAGGCCATGGATATGAGATATGCAAAA
ATTGATTTGAAATTCAGAATCAGCATGAAAATCTGATCTAAAACTAGTTG
TTATCATTAAATTTTTCATTCAAAGTTCATTCAAATTCAAACATTTTCAA
ATTATCAATTTTCCTTGGATTTGAAAATTTTAGTAAAAAAACAGCCTCCT
ATACCAGGCCAAGGGTGAGAGCTATGACAAAATGAATTTCAGATTCGGAA
TCAGCATGAAAAACTGATTTAAAAAAGATATCACATCACTAGAAAGCTAT
TCAAAATGGAAAATTTTAAAAGAATTGACTTTTAGCGGTTTTGGGCGGTT
TTCAGAGAAAAGGGTCTCTGGTAGCCGCTCAGGGGTAAGAGAAGGAAAAA
CGGATTTCAAATTCGGAATCAGCATGAAAAATTAATTTAAACGAGCAACA
TGCTGAATGGACCTACCTAATGATTAACATCAGATGAAAATAAGAAAAAA
GTGACAATAACTGTACAAAAATTCAGAATGGAAAAATAAAGCTTGTGTGT
TGAATAATGTAAAATAAATGTACTTTTAAGCTGTTTTTGGCCCAAATTTG
CCCAAAAAAATTTTCCTTAAAAATCTGGCTCCGTCACATTTCGGGCATTG
CCATTTTGCATCATTGTGCAAAAAATCAGAAAGAAAATAATGAGTCAACA
TTGAGAAAAGCTTTATTTTCTTATTTGGTTAAAGGGAATTTCCCCAAAAT
ACGAAAATCCGTCTTTTAAGGCGAATAAGAATTTTCCAGGAAAAACCACT
TCAGCCATTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAGGCAGTTTTTGG
CCCAAATTTGCCCAAATATATTTTTTTTCGAAAATCAGGCTCCGACACAT
TTTAGGCATTGCCATTTTGCATCATTGTGCAAAAAATCAGATAAAACTAA
AGAGCCAATCCTGAGAAAAGCTGGTAACAGACGGACGAACGAACGGACGA
ACGAACGGACATGGGTTAATTTATAGAACCTCCACCGGGGTACCCGGAGG
TAGGTCCAAAAAGATGGTTAAACTCAAAAAGTGTAATTTTGGACCCCCCT
ACTGTAGGATAGTGTTGCTATAGGAAAATGGTGATGCAAGTAGCCCCTAG
GTTGCAACAACTCCTTGTAAATTTTCTTTTTTCTCTTTTCAATTTATAGA
AAATGTAATGGACTTAGGCCTTTCAATTTTATATTTTCAAGCTTTAGAAA
AATGTAGGATTTAGGCCTTTCAGATTCGCTGAGATTTCTGTGGACTATGA
TGTAAAGAAAAAGGCTTTTCTAGTCATTTAGGACTTAGGCCTTTCTAAAT
GAAAATATTTTATAATGATTTGGAAAATATAGATGGGTACTAAGTCCATA
TGTTATAAAACTTGTTAATTTTAAAGAGGCCTAAGTCCTCTCTAGATCTT
TTCCGGGGTGAAACAGGAATTATCCAATCTCCAACACAATGGCTTTTAAT
TGGGAAGATATTAATTTGCCATAGGTCTCAGAAAATCCTTACTTTGTTAC
TTTTATGTGGAAGATTGTGTCAGAATCAGGAGATTAAATCTTAAATCGCA
ATTTACTCAAAATCACAAAAACGGACTTAGGCCCCTTTAAAATTAAGGCT
CTAAGGACTTAGGCCCCTTTAAAATTAAGGCTCTCCGGACTTAGGCCCCT
TTAAAAATAAGGTAGCGTATCGATTCAGTATCGATTGCAATAATATACCG
ATTAACTATCGATTAGCTATCGATTTAGTATTGACTGCAATAATATATTG
ATTAAGCATCGATTAAGTGTCGGTTAATATATCGATTTTTCATCAATTTC
TTATCGATTATCAAAACAAAGAAAATTATATCCTATGGAAAATTTGGTTA
TTTGCATCCATCTCTCTCGATTAATTTGTGCAGATGTAACAATATTAATA
ATGCCACTGTCGTGCCATCATCAAACAAAGGATTTTCTGTTAGGAACCTT
GTTAAACATTCCAGCAACTTCCATCAAAATGAACTGCAGCTTCTAAGTTT
TACCATTTGAAAAACTTTTAAAACAACATGTGCGGTTTGTGTCACCCCCA
GTCACGTGACATTTTTATCGAAACTAGCGCCGTAAAATATATTGACATTT
TTATCGAAACTAGCCCCGTAAAATATATTGACATTTTTATCGAAACTAGC
GCCGTAAATATATTGGAGAGTAAAATGTCTATGTATGGGGTCATACTACT
TAGCTTTAGCAATTTATAGCTATGATCTAGGTAAATGTTTTTTTTTCTGA
CTGTTTCATATGTTTGTTTGGAGGACAAAGGGTATTGGAAGGTTCACTGA
AGGAGGACCTTTAACCAAGAAGTAATGTAAACCTGTGAAGTTATTACCAT
GCGGATTTAAGGTACATACAGGTCAAAGTAATTGACACTAACTTTTTTTC
CATTTTTTTTAAGCTTCTCGAAAACGTGATGCAGACTCAGTTAAAGATCT
TCACCCAGACAAATTACCAGTGAGTACCAATTCAGTTTCATATTTATGTT
TTTATCATGTGTAATTAGTTATAAAAAATCCTACACTCCTAAATCTTACA
CTCAAAGGGTTTATAATGATGTTTTAAGGGCTTCAGGGTTTGATNCCTAA
ATCTTACACTCAAAGGGTTTATAATGATGTTTCAAGGGCTTCAGGGTTTG
ATTCAATGTAATTCTACAATCCAGTACATTCATATCTTAAAATTCTTTCC
ACGTGACGAATAAACTGTTAAAAACAGAATAAGCTTTATTTTTCTTTCTA
TGCTATGTTTTTCATTTCCTTTGTTTTTTTCTATTTAGCTCATTATTGAA
AGATATAAGCATGAAAAAGCTTTGCCCATGTTGGACAAGATAAAATTTCT
GGTTCCTTTTGATATGACTGTTGGTACCCTAACTAGTATTATAAGGTATG
TAAAAAAACTTTTATATGCACTGCTTTATCTATTGCTAGACTGTTACGAG
CTGACCTGCCTGTTGCAGATAAGATAATAAACATTGGCCTATTCCATTTT
GTACTTGTGGGGATAAATGAACATTTTGCAGGGCGTTCCAGAAGAAGAAA
TTCCGGGGGACCTAAGGAATTTGTTTATGTTTTTCCAGGGAATTATTGAA
ATTTTAATTGAATACCTAATTCTCCAAGGGGTTGGATATCAAGTACCATC
TATCTTTTATTTCCTTTTTCCTGGGGTCCTATGATATTCTCTTTTATATT
CTAAAGTTTTAAAAGAAACGTTATAATTAATTTTCAAAGGGTTAAAAGCT
ATTCTGAATTTTCCAAGACGTAGAATACCATTTTTACCAGTTAATTGAAT
CCTTTTTTCCAGGGATTTTATTGCAAATTTTTCTAGTTTCCAGAGGATAT
CCGCACAATTTCAGGAACTTTTTGTAGCTTGATAAGCTTTGTCCAACCCC
TTATGGATATTAAAATTGAACAGCTCATTACACTAACTTAAAATATATTA
AGTTAAGTTGCCATTCGTTTGAGAGAACCAGGTTTATTAGTTTAAAGGGT
GTTAATCTTGGCCACAAGATTGGGATTCAATCCCAAGTTTATCATTTGTC
GAGCTGTAGAATAAGAAAGCCTTATCTCCATTTTCATAATTTTGAGAAAG
TTTCAAAAACTGCAAAGCTGTGACTCCATTTCTTGGAGTTACGGCTTTCT
TTTTCTAAAAAAGACTGTCTCGATGCATCAAGAATACATTTTTAGAAAAA
GAAAGTCCAAGAAATAGACTCACAGCTTTGAAGTTTTTGGACCTTTCTGA
AAATTATGAAAATAGGATACGGCTTTCAAATTCTACAGCGACGCATTGCA
GAATCAAAATATCAATATTCATTTTTTAGGAAAAGATTACAATTAAACTC
TTCGCAGGCATTATTTATACTGTTCGACAATAAAAACATCTTCAGCGCAT
CTGGCGCTCTGTTAGACATTTATCGAGATCAAAAGGATGAAGATGGTTTT
CTCTATATTATTTATGCATCCCAAGAGACTTTCGGATGATGTTTGGCTTT
TCATGATGTTCTTCTGTTAAATGTTAAACGTTAAACTGAAGGGGCCTGTC
CATAGATTTTATGAGGCCCGAAGGGCTAGATATCTTGTCACGTGACATTA
CAAAAGAATTTCAGCGCTTGACCAATCAGAAGCTTCGCGGGTTTCCGAAA
ACAATAGCAGCAATATCTTTTGCGATATTCACTTTTCTTTGCTTGGAAGA
GCTTAAAGCACTACATCTAGCCCTTCGGGCTTTATAAATCTATGAGCCTG
TCTCATACCAAGTTGCTAACGTGAAGTTATCATAATAAATATTATAAGTC
CATTCGGTTGAAAGTGTGTACTCTTTTTTTGCTATTGTGTTAAAACCATG
CCAGCGTAATTAGACTTTTTCCATTGAGAGCGGTTTCCACATGGTAACAG
AAAAAAGAGTGTACACCACTATTGTTAGTGAATACAGAGTAAAATAAGGT
TATGTAAAGTATTCATTGTATAGACACACTGTTTATTTTATCATAAAGAA
TTTTAAATGTAAATCGCTTGCATCATGCATTTCAAAAATATTTTGCATTT
TATAAATTAGTGAAGAAAAGTTTTATTAAAATTGATCACTCTTCGAACAT
GCACTTTTAAGATA Coding sequence (CDS) from alignment at sc0000069:570759..587372- >TCONS_00006692 ID=TCONS_00006692|Name=TCONS_00006692|organism=Clytia hemisphaerica|type=CDS|length=1608bp|location=Sequence derived from alignment at sc0000069:570759..587372- (Clytia hemisphaerica) GAAAAGATTACAATTAAACTCTTCGCAGGCATTATTTATACTGTTCGACA ATAAAAACATCTTCAGCGCATCTGGCGCTCTGTTAGACATTTATCGAGAT CAAAAGGATGAAGATGGTTTTCTCTATATTATTTATGCATCCCAAGAGAC TTTCGGATGACTCATTATTGAAAGATATAAGCATGAAAAAGCTTTGCCCA TGTTGGACAAGATAAAATTTCTGGTTCCTTTTGATATGACTGTTGGTACC CTAACTAGTATTATAAGCTTCTCGAAAACGTGATGCAGACTCAGTTAAAG ATCTTCACCCAGACAAATTACCAATGTTCTTCCAGAATCAAGAAGACTCT CCTGTTTCTCCTACTACAGCTGCAAAATCATTTAAAGAAAAGAAATCTTT TGGAAAAGATTACAATTAAACTCTTCGCAGGCATTATTTATACTGTTCGA CAATAAAAACATCTTCAGCGCATCTGGCGCTCTGTTAGACATTTATCGAG ATCAAAAGGATGAAGATGGTTTTCTCTATATTATTTATGCATCCCAAGAG ACTTTCGGATGACTCATTATTGAAAGATATAAGCATGAAAAAGCTTTGCC CATGTTGGACAAGATAAAATTTCTGGTTCCTTTTGATATGACTGTTGGTA CCCTAACTAGTATTATAAGCTTCTCGAAAACGTGATGCAGACTCAGTTAA AGATCTTCACCCAGACAAATTACCAATGTTCTTCCAGAATCAAGAAGACT CTCCTGTTTCTCCTACTACAGCTGCAAAATCATTTAAAGAAAAGAAATCT TTTGGAAAAGATTACAATTAAACTCTTCGCAGGCATTATTTATACTGTTC GACAATAAAAACATCTTCAGCGCATCTGGCGCTCTGTTAGACATTTATCG AGATCAAAAGGATGAAGATGGTTTTCTCTATATTATTTATGCATCCCAAG AGACTTTCGGATGACTCATTATTGAAAGATATAAGCATGAAAAAGCTTTG CCCATGTTGGACAAGATAAAATTTCTGGTTCCTTTTGATATGACTGTTGG TACCCTAACTAGTATTATAAGCTTCTCGAAAACGTGATGCAGACTCAGTT AAAGATCTTCACCCAGACAAATTACCAATGTTCTTCCAGAATCAAGAAGA CTCTCCTGTTTCTCCTACTACAGCTGCAAAATCATTTAAAGAAAAGAAAT CTTTTGGAAAAGATTACAATTAAACTCTTCGCAGGCATTATTTATACTGT TCGACAATAAAAACATCTTCAGCGCATCTGGCGCTCTGTTAGACATTTAT CGAGATCAAAAGGATGAAGATGGTTTTCTCTATATTATTTATGCATCCCA AGAGACTTTCGGATGACTCATTATTGAAAGATATAAGCATGAAAAAGCTT TGCCCATGTTGGACAAGATAAAATTTCTGGTTCCTTTTGATATGACTGTT GGTACCCTAACTAGTATTATAAGCTTCTCGAAAACGTGATGCAGACTCAG TTAAAGATCTTCACCCAGACAAATTACCAATGTTCTTCCAGAATCAAGAA GACTCTCCTGTTTCTCCTACTACAGCTGCAAAATCATTTAAAGAAAAGAA ATCTTTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00006692-exon-sc0000069-1575043694:587183..587372 | TCONS_00006692-exon-sc0000069-1575043694:587183..587372 | Clytia hemisphaerica | exon |
TCONS_00006692-exon-sc0000069-1575043694:572904..572959 | TCONS_00006692-exon-sc0000069-1575043694:572904..572959 | Clytia hemisphaerica | exon |
TCONS_00006692-exon-sc0000069-1575043694:572478..572584 | TCONS_00006692-exon-sc0000069-1575043694:572478..572584 | Clytia hemisphaerica | exon |
TCONS_00006692-exon-sc0000069-1575043694:570759..571543 | TCONS_00006692-exon-sc0000069-1575043694:570759..571543 | Clytia hemisphaerica | exon |
TCONS_00006692-exon-sc0000069-1510915933:587183..587372 | TCONS_00006692-exon-sc0000069-1510915933:587183..587372 | Clytia hemisphaerica | exon |
TCONS_00006692-exon-sc0000069-1510915933:572904..572959 | TCONS_00006692-exon-sc0000069-1510915933:572904..572959 | Clytia hemisphaerica | exon |
TCONS_00006692-exon-sc0000069-1510915933:572478..572584 | TCONS_00006692-exon-sc0000069-1510915933:572478..572584 | Clytia hemisphaerica | exon |
TCONS_00006692-exon-sc0000069-1510915933:570759..571543 | TCONS_00006692-exon-sc0000069-1510915933:570759..571543 | Clytia hemisphaerica | exon |
TCONS_00006692-exon-sc0000069-1491911889:587183..587372 | TCONS_00006692-exon-sc0000069-1491911889:587183..587372 | Clytia hemisphaerica | exon |
TCONS_00006692-exon-sc0000069-1491911889:572904..572959 | TCONS_00006692-exon-sc0000069-1491911889:572904..572959 | Clytia hemisphaerica | exon |
TCONS_00006692-exon-sc0000069-1491911889:572478..572584 | TCONS_00006692-exon-sc0000069-1491911889:572478..572584 | Clytia hemisphaerica | exon |
TCONS_00006692-exon-sc0000069-1491911889:570759..571543 | TCONS_00006692-exon-sc0000069-1491911889:570759..571543 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
sc0000069 | supercontig | sc0000069:570759..587372 - |
Annotated Terms
The following terms have been associated with this transcript:
Blast
BLAST of TCONS_00006692 vs. Swiss-Prot (Human)
Match: MLP3A (Microtubule-associated proteins 1A/1B light chain 3A OS=Homo sapiens GN=MAP1LC3A PE=1 SV=2) HSP 1 Score: 125.561 bits (314), Expect = 2.169e-34 Identity = 57/102 (55.88%), Postives = 75/102 (73.53%), Query Frame = 1
Query: 205 DADSVKDLHPDKLPLIIERYKHEKALPMLDKIKFLVPFDMTVGTLTSIIRKRLQLNSSQALFILFDNKNIFSASGALLDIYRDQKDEDGFLYIIYASQETFG 510
+ ++D HP K+P+IIERYK EK LP+LDK KFLVP + + L IIR+RLQLN +QA F+L + ++ S S + DIY +KDEDGFLY++YASQETFG
Sbjct: 19 EVQQIRDQHPSKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETFG 120
The following BLAST results are available for this feature:
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