TCONS_00006339-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00006339-protein
Unique NameTCONS_00006339-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length908

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00006339-protein ID=TCONS_00006339-protein|Name=TCONS_00006339-protein|organism=Clytia hemisphaerica|type=polypeptide|length=908bp
MSSRMKILLCCYLFIVTSVQAQSNWWGNSKEAERNNTTIPVKNPFPLADF
LEITNISRLLSWKGLQCQSKINPYDCECQRSCQNTGSCCIDYLWNHNEAP
ITNTSSLESAKAYQKILDSSIKEMSCLPFFPFSTVIKQHFIMVSGCSESA
TATDKQKCINSEGNPQNEQIPVLGKDQYLYKNEHCAKCNGILVYKYEKIE
IFCDESLVDTKSTDFKSKTIFELLEQYPKGCSIKPSLGLQSDIIECQLDF
CPPVYASYCSIIAARFHPVSGIFSDSVKNVYCFKCNGGLVGPNAEVDATF
ETYVHGGGWSKTVDMNELMNKKSDQCLSDEVRSSYGDCIPMLCGFGYELL
NRQCVKTISGRNISNSLINISTASNDTTFVQKCLPQIHQSLALYIFFNST
FIEYVSAERYVKDVFEKHQITGDTMFILQDSGFVIQSPVITTNLSLLSIQ
KEVFTYFGISKIVLTPSIHNLPFVNTLDLSKYFEGGSKLCAFTSKQSIPR
PDTPCEILGTDSKLILEIYRNGSMKEKIDKCHFYYLDSSCFRQELKYKDF
SVENSSKVLTITTEDDTVVSYSPDKYAPNPITNGFEICIPNGTESSKSKY
PWQETINDASYIISLIGTIASIVSHSIFIILFYLVRPLRNTGGLYVLVLV
IFLLASDLIFIISINLTLNTGACKCFGILLYETLLLVCCWTIVVAFDMTL
KFTSSFDKGSSDDPQKTLRKRILIVLLLCTGLTLLVVTLNETDVLDFAFE
QNCWIGNSVLRIGFYFVPIVISYTLCIVDLAILIYSIYKAKQSSKNALGD
SKSRDISLLYMAIKLIIILGITEILGLIQIKDSDLDESEAVFNSVFGIFY
DITRSLRGVLIFVVYMLNEKTLKLIKNELKKRRKREIPYRVTYTADTTHS
NITTESHS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003612XLOC_003612Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00006339TCONS_00006339Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000832GPCR_2_secretin-like
IPR017981GPCR_2-like
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0004930G-protein coupled receptor activity
GO:0004888transmembrane signaling receptor activity
Vocabulary: Biological Process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
GO:0007166cell surface receptor signaling pathway
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007166 cell surface receptor signaling pathway
biological_process GO:0007186 G-protein coupled receptor signaling pathway
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004930 G-protein coupled receptor activity
molecular_function GO:0004888 transmembrane signaling receptor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1070.10coord: 593..905
e-value: 2.7E-16
score: 58.8
IPR000832GPCR, family 2, secretin-likePFAMPF000027tm_2coord: 610..859
e-value: 4.0E-9
score: 36.0
IPR017981GPCR, family 2-likePROSITEPS50261G_PROTEIN_RECEP_F2_4coord: 610..869
score: 17.389

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00006339-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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