TCONS_00006308-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00006308-protein
Unique NameTCONS_00006308-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length607

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00006308-protein ID=TCONS_00006308-protein|Name=TCONS_00006308-protein|organism=Clytia hemisphaerica|type=polypeptide|length=607bp
MATSSDASQATFQKKISILYGSQTGTAEDVAERIGRESRRRHLETTVSSL
DDYTIANLIQENVVVFVASTTGQGDPPDNMKKFWRFILRKDLPGSSLNGI
NFAVLGLGDSSYLKFNFIAKKLCKRLLQLGGNQILNSGLADEQHPLGLDA
TIDPWLVSLWDIVLSFYPLEPNQKIIPQKQLLAAKFKVEVVDENIIVADN
INDVKLNSKGDAVNEHNPWTCHINSNVKKTVENHFQDVRLLSFDLTGSDL
KYVPGDVLMIKPKNRKEVLEEFFTLVKWNPQTKVKISQNWPDTPILRGLT
SVITLHDLFKNYLSIQGVPKRYFFELLSHFTNSELEEERLLEFCSAEGQE
DLYEYCYKPKRNYLEVLQDFPHACSNLKLEYVFDLFPPMKPRAFSIASSQ
KVDSNVAQILMAVVNYKTSMFLPRQGLCSTWLASLPKASEESMQCWINKG
TIVFPKDNTVPVIMVGPGTGVAPFRSFMQERLQSNAKGETVLFFGCRNKT
GDDFFRDEWNALGEDSPVKIFTCYSRDQPQKIYVQHLLKQQGEFIWNLIS
QKNAYFFIAGNSKDMPNDVINGLKEIFQSAGSMKEEESEQYFKEMEMKSR
FQCETWS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003601XLOC_003601Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00006308TCONS_00006308Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001709Flavoprot_Pyr_Nucl_cyt_Rdtase
IPR001094Flavdoxin-like
IPR008254Flavodoxin/NO_synth
IPR001433OxRdtase_FAD/NAD-bd
IPR029039Flavoprotein-like_dom
IPR003097FAD-binding_1
IPR028879NDOR1
IPR017927Fd_Rdtase_FAD-bd
IPR017938Riboflavin_synthase-like_b-brl
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0010181FMN binding
GO:0003958NADPH-hemoprotein reductase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0010181 FMN binding
molecular_function GO:0003958 NADPH-hemoprotein reductase activity
molecular_function GO:0016491 oxidoreductase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001709Flavoprotein pyridine nucleotide cytochrome reductasePRINTSPR00371FPNCRcoord: 426..435
score: 36.9
coord: 488..497
score: 48.28
coord: 531..547
score: 29.68
coord: 392..399
score: 56.47
coord: 252..262
score: 36.26
coord: 463..482
score: 60.4
IPR001094Flavodoxin-likePRINTSPR00369FLAVODOXINcoord: 123..142
score: 34.06
coord: 65..76
score: 49.35
coord: 17..30
score: 50.22
coord: 99..109
score: 47.59
IPR008254Flavodoxin/nitric oxide synthasePFAMPF00258Flavodoxin_1coord: 18..155
e-value: 1.8E-32
score: 112.4
IPR008254Flavodoxin/nitric oxide synthasePROSITEPS50902FLAVODOXIN_LIKEcoord: 16..160
score: 29.183
NoneNo IPR availableGENE3D2.40.30.10coord: 203..443
e-value: 7.9E-50
score: 169.1
NoneNo IPR availableGENE3D3.40.50.80coord: 460..607
e-value: 1.0E-35
score: 122.5
NoneNo IPR availableSUPERFAMILY52343Ferredoxin reductase-like, C-terminal NADP-linked domaincoord: 454..606
IPR001433Oxidoreductase FAD/NAD(P)-bindingPFAMPF00175NAD_binding_1coord: 464..568
e-value: 2.7E-14
score: 53.6
IPR029039Flavoprotein-like domainGENE3D3.40.50.360coord: 2..182
e-value: 5.0E-47
score: 159.3
IPR029039Flavoprotein-like domainSUPERFAMILY52218Flavoproteinscoord: 14..173
IPR003097FAD-binding, type 1PFAMPF00667FAD_binding_1coord: 214..431
e-value: 4.3E-35
score: 121.2
IPR028879NADPH-dependent diflavin oxidoreductase 1HAMAPMF_03178NDOR1coord: 14..607
score: 35.424
IPR017927Ferredoxin reductase-type FAD-binding domainPROSITEPS51384FAD_FRcoord: 216..474
score: 11.484
IPR017938Riboflavin synthase-like beta-barrelSUPERFAMILY63380Riboflavin synthase domain-likecoord: 206..439

Blast
[Close]
BLAST of TCONS_00006308-protein vs. Swiss-Prot (Human)
Match: NDOR1 (NADPH-dependent diflavin oxidoreductase 1 OS=Homo sapiens GN=NDOR1 PE=1 SV=1)

HSP 1 Score: 537.339 bits (1383), Expect = 0.000e+0
Identity = 275/596 (46.14%), Postives = 380/596 (63.76%), Query Frame = 0 
Query:   15 KISILYGSQTGTAEDVAERIGRESRRRHLETTVSSLDDYTIANLIQENVVVFVASTTGQGDPPDNMKKFWRFILRKDLPGSSLNGINFAVLGLGDSSYLKFNFIAKKLCKRLLQLGGNQILNSGLADEQHPLGLDATIDPWLVSLWDIVLSFYPLEPNQKIIPQKQLLAAKFKVEVVDENIIVADNINDVKLNSKGDAVNEHNPWTCHINSNVKKTVENHFQDVRLLSFDLTGSDLKYVPGDVLMIKPKNRKEVLEEFFTLVKWNPQTKVKISQNWPDTPILRGLTSVITLHDLFKNYLSIQGVPKRYFFELLSHFTNSELEEERLLEFCSAEGQEDLYEYCYKPKRNYLEVLQDFPHACSNLKLEYVFDLFPPMKPRAFSIASSQKVDSNVAQILMAVVNYKTSMFLPRQGLCSTWLASL-PKASEESMQCWINKGTIVFPKDNTVPVIMVGPGTGVAPFRSFMQERLQSNAKGET--VLFFGCRNKTGDDFFRDEWNALGEDSPVKIFTCYSRDQPQKIYVQHLLKQQGEFIWNLISQKNAYFFIAGNSKDMPNDVINGLKEIFQSAGSMKEEESEQYFKEMEMKSRFQCETWS 607
            ++ +L+GSQTGTA+DV+ER+GRE+RRR L   V +LD Y + NLI E +V+FV +TTGQGDPPDNMK FWRFI RK+LP ++L  ++FAVLGLGDSSY KFNF+AKKL +RLLQLGG+ +L   L D+QH LG DA +DPWL  LWD VL  YP  P    IP    L +KF +  + E          V      +  +E  P+   + SN + T  +HFQDVRL+ FD+ GS + +  GDV++I+P N    ++ F  ++  +P     +    PD      L    ++  L  +YL I  VP+R FFELL+  +  ELE E+LLEF SA+GQE+L+EYC +P+R  LEVL DFPH  + +  +Y+ DL P ++PRAFSIASS     +  QIL+AVV ++T +  PR+GLCS+WLASL P      +  W+  G++ FP+    PVIMVGPGTGVAPFR+ +QER+   A+G+T   LFFGCR +  D ++  EW  L +   + +   +SR+Q QK+YVQH L++ G  +W L+ ++ AYF++AGN+K MP DV   L  IFQ  G +   ++  Y   ++   RFQ ETW+
Sbjct:    5 QLLVLFGSQTGTAQDVSERLGREARRRRLGCRVQALDSYPVVNLINEPLVIFVCATTGQGDPPDNMKNFWRFIFRKNLPSTALCQMDFAVLGLGDSSYAKFNFVAKKLHRRLLQLGGSALLPVCLGDDQHELGPDAAVDPWLRDLWDRVLGLYPPPPGLTEIPPGVPLPSKFTLLFLQEAPSTGSEGQRVAHPGSQEPPSESKPFLAPMISNQRVTGPSHFQDVRLIEFDILGSGISFAAGDVVLIQPSNSAAHVQRFCQVLGLDPDQLFMLQPREPDVSSPTRLPQPCSMRHLVSHYLDIASVPRRSFFELLACLSLHELEREKLLEFSSAQGQEELFEYCNRPRRTILEVLCDFPHTAAAIPPDYLLDLIPVIRPRAFSIASSLLTHPSRLQILVAVVQFQTRLKEPRRGLCSSWLASLDPGQGPVRVPLWVRPGSLAFPETPDTPVIMVGPGTGVAPFRAAIQERV---AQGQTGNFLFFGCRWRDQDFYWEAEWQELEKRDCLTLIPAFSREQEQKVYVQHRLRELGSLVWELLDRQGAYFYLAGNAKSMPADVSEALMSIFQEEGGLCSPDAAAYLARLQQTRRFQTETWA 597
The following BLAST results are available for this feature:
BLAST of TCONS_00006308-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NDOR10.000e+046.14NADPH-dependent diflavin oxidoreductase 1 OS=Homo ... [more]
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