TCONS_00005700-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00005700-protein
Unique NameTCONS_00005700-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length176

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00005700-protein ID=TCONS_00005700-protein|Name=TCONS_00005700-protein|organism=Clytia hemisphaerica|type=polypeptide|length=176bp
MSTADRWKKKKNKEEEKLSEKEKEQKEMLLKLTGLADVLMSEGDFQIYEK
TFEKLNFEIKESEKKAGEDQFADAEVDDEDDALEAAFKGESTEKSYADSA
KTQEKESEPKVNISDEVQWFYKEKDDEKNELKGPFPSSQMLKWQEEGKFG
DGVYCRRENQEGSLYNSRRIDFDLYT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003225XLOC_003225Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00005700TCONS_00005700Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003169GYF
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 4..31
NoneNo IPR availableCOILSCoilCoilcoord: 176..176
NoneNo IPR availableGENE3D3.30.1490.40coord: 110..176
e-value: 2.5E-19
score: 68.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..110
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableSUPERFAMILY55277GYF domaincoord: 116..175
IPR003169GYF domainSMARTSM00444gyf_5coord: 117..173
e-value: 1.3E-9
score: 47.9
IPR003169GYF domainPFAMPF02213GYFcoord: 118..172
e-value: 4.2E-13
score: 48.7
IPR003169GYF domainPROSITEPS50829GYFcoord: 116..173
score: 12.104

Blast
[Close]
BLAST of TCONS_00005700-protein vs. Swiss-Prot (Human)
Match: CD2B2 (CD2 antigen cytoplasmic tail-binding protein 2 OS=Homo sapiens GN=CD2BP2 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.125e-21
Identity = 54/158 (34.18%), Postives = 81/158 (51.27%), Query Frame = 0 
Query:   22 EKEQKEMLLKLTGLADVLMSEGDFQIYEKTFEKLNFEIKE--SEKKAGEDQFADAEVDDEDDALEAAFKGESTEKSYADSAKTQEKESEPKVNISDEVQWFYKEKDDEKNELKGPFPSSQMLKWQEEGKFGDGVYCRRENQEGS-LYNSRRIDFDLYT 176
            +    + L +L+GLAD +++ G+  +Y++T E+L   +K    +     +      +D         F  E  E+       TQ  E+E + +   +V W YK ++    EL GPF S+QM  W  EG F DGVYCR+ +  G   YNS+RIDFDLYT
Sbjct:  192 QPSSPQRLDRLSGLADQMVARGNLGVYQETRERLAMRLKGLGCQTLGPHNPTPPPSLD--------MFAEELAEEELETPTPTQRGEAESRGDGLVDVMWEYKWENTGDAELYGPFTSAQMQTWVSEGYFPDGVYCRKLDPPGGQFYNSKRIDFDLYT 341
The following BLAST results are available for this feature:
BLAST of TCONS_00005700-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CD2B22.125e-2134.18CD2 antigen cytoplasmic tail-binding protein 2 OS=... [more]
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