TCONS_00004845-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004845-protein
Unique NameTCONS_00004845-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length577

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004845-protein ID=TCONS_00004845-protein|Name=TCONS_00004845-protein|organism=Clytia hemisphaerica|type=polypeptide|length=577bp
MSVMVRAQENFDVGVYLQKQHITMRSTTNCTINLNDEDLKPTASIHVIVD
TPDKLINRSCLTKSTLDELTMSNLDKKTHLTKANLMADMKHNNTDDTHQP
LVKDSLNDNSDTDNTKDQGKDNKKKPYGGRPLRFQCPDCDRKFHAPSHLK
RHRLCHTSERPFQCHICKKGFLQAWHLGRHMTIHTGNKPFQCPECPKTFG
SRFEMKTHCNYIHKGIKEHECTVCNKMFTLRSNLKVHMRKHTGEKPYQCE
ICLKRFGQRGHLQYHMRKHEGKTSSTPAGKEHSVIKANEFITKSKSMEED
EKDLTTSSDYGSESDSMNSDPASPMSPTFPSMTTPVSRARYSPLSPVSRP
IPMSRSPYNPPSPPESSFFRFAGNDIPLSGRMFDHTNPTEIKPFVCVSCN
CGFGEIRSIRAHVRHSHARNSIHNELFSCAFCCKTFTTIDSLQHHHDACK
QRHIPLSTRPTPPLLKKEHIDYDYNPRPLKRSGSSEIYFQYGKRQMYGPV
SPGGRSSTSDTTFDRLLPPYNREPALYECPHGCECRKPPTNLNNKMVQAR
YIKYLEQCQQMLESHVQLMEAIKVSRK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002745XLOC_002745Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004845TCONS_00004845Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 247..269
e-value: 2.3E-4
score: 30.5
coord: 427..453
e-value: 54.0
score: 6.8
coord: 394..417
e-value: 11.0
score: 12.7
coord: 219..241
e-value: 6.0E-4
score: 29.1
coord: 134..156
e-value: 0.045
score: 22.9
coord: 190..213
e-value: 0.0017
score: 27.6
coord: 162..184
e-value: 0.025
score: 23.8
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 136..156
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 249..269
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 192..213
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 396..417
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 164..184
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 221..241
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 134..161
score: 14.378
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 190..218
score: 11.489
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 247..274
score: 12.653
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 162..189
score: 13.838
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 219..246
score: 15.937
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 156..208
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 217..269
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 133..165
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 247..269
e-value: 6.6E-4
score: 19.9
coord: 134..153
e-value: 0.0041
score: 17.4
coord: 219..241
e-value: 4.4E-5
score: 23.6
NoneNo IPR availableGENE3D3.30.160.60coord: 201..228
e-value: 1.4E-15
score: 56.6
coord: 258..405
e-value: 5.9E-13
score: 48.3
coord: 229..257
e-value: 2.3E-19
score: 68.8
coord: 406..451
e-value: 2.0E-4
score: 20.9
NoneNo IPR availableGENE3D3.30.160.60coord: 168..183
e-value: 2.2E-11
score: 43.2
NoneNo IPR availableGENE3D3.30.160.60coord: 79..146
e-value: 5.1E-5
score: 22.8
NoneNo IPR availableGENE3D3.30.160.60coord: 147..167
e-value: 5.3E-13
score: 48.6
NoneNo IPR availableGENE3D3.30.160.60coord: 184..200
e-value: 2.0E-9
score: 36.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 90..129
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 266..285
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 290..363

Blast
[Close]
BLAST of TCONS_00004845-protein vs. Swiss-Prot (Human)
Match: ZN701 (Zinc finger protein 701 OS=Homo sapiens GN=ZNF701 PE=1 SV=3)

HSP 1 Score: 135.191 bits (339), Expect = 6.743e-34
Identity = 65/141 (46.10%), Postives = 88/141 (62.41%), Query Frame = 0 
Query:  134 FQCPDCDRKFHAPSHLKRHRLCHTSERPFQCHICKKGFLQAWHLGRHMTIHTGNKPFQCPECPKTFGSRFEMKTHCNYIHKGIKEHECTVCNKMFTLRSNLKVHMRKHTGEKPYQCEICLKRFGQRGHLQYHMRKHEGKTS 274
            ++C +CD+ F   SHL+RHR  HT E+P++C +C K F +  HL +H  IHTG KP++C EC KTF     +  H   IH G K ++C  C K+F  +SNL  H R HTGEKPY+C  C K F ++ +L+ H R H GK S
Sbjct:  392 YKCEECDKVFSRKSHLERHRRIHTGEKPYKCKVCDKAFRRDSHLAQHTVIHTGEKPYKCNECGKTFVQNSSLVMH-KVIHTGEKRYKCNECGKVFNHKSNLACHRRLHTGEKPYKCNECGKVFNRKSNLERHHRLHTGKKS 531

HSP 2 Score: 107.071 bits (266), Expect = 1.563e-24
Identity = 59/150 (39.33%), Postives = 84/150 (56.00%), Query Frame = 0 
Query:  123 KKKPYGGRPLRFQCPDCDRKFHAPSHLKRHRLCHTSERPFQCHICKKGFLQAWHLGRHMTIHTGNKPFQCPECPKTFGSRFEMKTHCNYIHKGIKEHECTVCNKMFTLRSNLKVHMRKHTGEKPYQCEICLKRFGQRGHLQYHMRKHEGK 272
            +K+    R   FQ  +  + F+  S LK+H++ H  ++ ++C +C K F Q  +L  H   HTG  P+ C EC KTF     +  H   IH G K ++C  C K+F  +SNL  H R HTGEKPY+CE C K F ++ HL+ H R H G+
Sbjct:  270 QKREVHTREKSFQRNESGKAFNGSSLLKKHQIIHLGDKQYKCDVCGKDFHQKRYLACHR-CHTGENPYTCNECGKTFSHNSALLVH-KAIHTGEKPYKCNECGKVFNQQSNLARHHRVHTGEKPYKCEECDKVFSRKSHLERHRRIHTGE 417

HSP 3 Score: 106.686 bits (265), Expect = 2.126e-24
Identity = 64/162 (39.51%), Postives = 86/162 (53.09%), Query Frame = 0 
Query:  119 GKDNKKKPY--------GGRPLRFQCPDCDRKFHAPSHLKRHRLCHTSERPFQCHICKKGFLQAWHLGRHMTIHTGNKPFQCPECPKTFGSRFEMKTHCNYIHKGIKEHECTVCNKMFTLRSNLKVHMRKHTGEKPYQCEICLKRFGQRGHLQYHMRKHEGK 272
            GKD  +K Y        G  P  + C +C + F   S L  H+  HT E+P++C+ C K F Q  +L RH  +HTG KP++C EC K F  +  ++ H   IH G K ++C VC+K F   S+L  H   HTGEKPY+C  C K F Q   L  H   H G+
Sbjct:  315 GKDFHQKRYLACHRCHTGENP--YTCNECGKTFSHNSALLVHKAIHTGEKPYKCNECGKVFNQQSNLARHHRVHTGEKPYKCEECDKVFSRKSHLERH-RRIHTGEKPYKCKVCDKAFRRDSHLAQHTVIHTGEKPYKCNECGKTFVQNSSLVMHKVIHTGE 473
The following BLAST results are available for this feature:
BLAST of TCONS_00004845-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZN7016.743e-3446.10Zinc finger protein 701 OS=Homo sapiens GN=ZNF701 ... [more]
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