Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00004794-protein ID=TCONS_00004794-protein|Name=TCONS_00004794-protein|organism=Clytia hemisphaerica|type=polypeptide|length=2084bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00004794-protein vs. Swiss-Prot (Human)
Match: LAMC1 (Laminin subunit gamma-1 OS=Homo sapiens GN=LAMC1 PE=1 SV=3) HSP 1 Score: 453.366 bits (1165), Expect = 1.799e-131 Identity = 375/1357 (27.63%), Postives = 602/1357 (44.36%), Query Frame = 0 Query: 700 VYMSYLYG-SLYDDGFSCNCDPVGSINPAVCNTYGGQ-CNCKQNIYGRTCSTCLP-------DHYNFTSGLGCRECDCNLEGSDNNSC--DP-------NTGQCP-CKSNVIGRTCNKCALNYYGISSAQGCRACACNPLYSVSSSCDQSGNCRCKPGVSGAKCTQCANGYYDLTINGCKSCDCNPLGTAGNRCNTASGICNCKALTMGERCANCTVGYYGFSSEFPDTCLKCHCTGKTSDCDVAPGYYIMFVNTTFSTRRDNNLLEGWKSVDENGVNAGKGSWNWAPEYSIERGFLKVDDTNNSPQLYFSAPDIYLGNKRSSYMYYLTFDMTQQSVTNPRNRQQEGDIIIKGKNQNFKLVALVTLVPLQYQRFRSYKIKFYEKNWFKNTPSGDNP-----SSLEMLNTLSDLEYIYIRAKWTSNDGEFCGLSNVVMQYSTYNIGSSTGLTPARNVEYCNCPVQYSGQFCQECNVGFTRDPPNGGASDDCKACQCNSHAAFCDKANGTCFNCLHNTKGNNCEFCKDGFYGTATNKQPDDCKSCLCPGGPHAPNQFATKCSLNNDNSHTCTDCQTGYTGQRCERCSDGYYGNPMDPRGK---CQKCTCNGNIDPSAAGNCNTETGECLRCLYDTFGKECEFCRPGFFGDAIAKS----CRACSCNTLGSV--DTSCQNMTGQCNCRPNVVGRICDKCAENTYDFNSADGCKLCQCHLKGSKTQQCNLVTGKCECNPRVEGDKCDRCATGYYDL-DKGCLPCNCNTSFTVSNTTCHPQTGQCQCRDSSLGGPYSGRTCSECSVNAI--GTPPHCELCHSPCYDNWNNYINREASEIARMQANVTSLLSKFGGMSYERIEMELDWLNGNLSAASTSFSGARYNTSEKLEQFKVIETKIVEYEGVTQDVEQQLTSSSEFFTTTVS-KFDGTVKLSAQVPQPSALS-LIKIRVRRDVHLIPITVNASYVMQMAEGFIASSKTNRVSGRAIFMTVQDQYEKVVSSNTTIADAAQKLSEAVSDLSKAAAERSKVEDILDTQYKAAFATNTYELKKIHDIVASI-MIMQNKTVTIHQAALTTLESAKMVINQAEANANKRRSDASTVVQKVSRMKVEAVTLKTSAMNQKKTADDLKRKVDDVLLDVQEELQKLSDAVLSIAQSRNSTLNILNLAYEITNMTMPISLSEIQELSEKIQNTAINEGMINSTFADAQTGLRKAQEVQERSKEALDLSQNTLQQIQNLELTMSQSSSIRQESIKVQTETDIMIRHIQNISAEIEQVYSTTSGQGGETLSLLKSAITQAESNKMCFVNAKSMIDNATVVSQAARKTANEAYGIHQTNSEQVPQYAKTINDLYMSTSTIHT 2017 V SY Y S + G C C+ G + + N + CNCK N YG C CLP S C CDCN + C DP + G C C+ N G C +C N++ + + + C +C C+P+ S+S+ CD G C CKPGV G KC +C G++ LT GC+ C C+P G+ + CN +G C CK G C C G++ S P C C C G +S C A GY + +++TF D GW++ +G A + E+S ER + V + P+ YF AP +LG + SY L+F V R D++++G L VPL Q SY + K F+ + D P + E L++L I IR ++ + L +V + + G PA VE C CPV Y GQFC+ C G+ R+ PN G C C CN H+ CD G C NC NT G +CE C DG+YG +T DC+ C CPGG TK CT+C TG TG+RCE C DGY+G+P+ G C+ C C+ NIDP+A GNCN TGECL+C+Y+T G C+ C+ GFFG+ +A + C+AC+CN G++ +SC +TGQC C P+V G+ C C Y+ S GC+ C CH GS QC++ TG+CEC P + G C+RC ++ +GC PC+C+ ++S C G+C+CR+ + G C +C N + P C+ C + CY + + A ++Q EL+ L NL + + K + +V++ + E + V +DV+Q L + T+S + + + + L+ + V LI I ++A ++ ++ + ++ K+ + AD ++++ +D S A + + L + + AF EL + ++ +I ++ + +H+ A + A + A D+ T+ + + +K+EA L+ + K +DL+ + L+V+ L+K + Q+ + L + A + +QE ++ + N + +N A+ LRK + + EA ++ T + Q L + ++ + ++ + + + ++ + AE E+ ++ + E ++LK + +AE + D +++ A + A EA + V INDL + T Sbjct: 269 VLKSYYYAISDFAVGGRCKCN--GHASECMKNEFDKLVCNCKHNTYGVDCEKCLPFFNDRPWRRATAESASECLPCDCN---GRSQECYFDPELYRSTGHGGHCTNCQDNTDGAHCERCRENFFRLGNNEACSSCHCSPVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEAGCRPCSCDPSGSI-DECNIETGRCVCKDNVEGFNCERCKPGFFNLESSNPRGCTPCFCFGHSSVCTNAVGYSVYSISSTFQIDED-----GWRAEQRDGSEA-------SLEWSSERQDIAVISDSYFPR-YFIAPAKFLGKQVLSYGQNLSFSF---RVDRRDTRLSAEDLVLEG-------AGLRVSVPLIAQ-GNSYPSETTVKYVFRLHEATDYPWRPALTPFEFQKLLNNLTSIKIRGTYSERSAGY--LDDVTLASARPGPG-----VPATWVESCTCPVGYGGQFCEMCLSGYRRETPNLGPYSPCVLCACNGHSETCDPETGVC-NCRDNTAGPHCEKCSDGYYGDSTAGTSSDCQPCPCPGGSSCAVVPKTK-------EVVCTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCSDNIDPNAVGNCNRLTGECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACNCNLYGTMKQQSSCNPVTGQCECLPHVTGQDCGACDPGFYNLQSGQGCERCDCHALGSTNGQCDIRTGQCECQPGITGQHCERCEVNHFGFGPEGCKPCDCHPEGSLS-LQCK-DDGRCECREG-----FVGNRCDQCEENYFYNRSWPGCQECPA-CYRLVKDKV---ADHRVKLQ--------------------ELESLIANLGTGDEMVTDQAFEDRLKEAEREVMDL-LREAQDV-KDVDQNLMDRLQRVNNTLSSQISRLQNIRNTIEETGNLAEQARAHVENTERLIEIASRELEKAKVAAANVSVTQPESTGDPNNMTLLAEEARKLAERHKQEADDIVRVAKTANDTSTEAY--NLLLRTLAGENQTAFEIE--ELNRKYEQAKNISQDLEKQAARVHEEAKRAGDKAVEIYASV---AQLSPLDSETLENEANNIKMEAENLEQLIDQKLKDYEDLREDMRGKELEVKNLLEKGK----TEQQTADQLLARADAAKALAEEAAKKGRDTLQEANDILNNLKDFDRRVNDNKTAAEEALRKIPAINQTITEA---NEKTREAQQALGSAAADATEAKNKAHEAERIASAVQKNATSTKAEAERTFAEVTDLDNEVNNMLKQ-LQEAEKE---LKRKQDDADQDMMMAGMASQAAQEAEINARKAKNSVTSLLSIINDLLEQLGQLDT 1529 HSP 2 Score: 183.341 bits (464), Expect = 4.256e-46 Identity = 137/473 (28.96%), Postives = 211/473 (44.61%), Query Frame = 0 Query: 38 NEGFNLNI--NSLCGSPPEDFCA-----GV--DCNFKCDGNDPTNSYSPSRITDAYELE--TFWKSR------NFDEPVTMVFDFGSKMILHQITITFQFEFPNGLYIQKSSDDGTTYLTLMYYAIRCNDTFQLAEANKYNRLDVLCFKLNPTSNQQLYQISYA---PRRDNYVATEVLKG----------GIVRDYYIATNVKIILEEF--FKPSDFN-PNVADRRKFYFAIRDVDIQASCYCNGMSNQCDDKDFGK--CVCQKNTEGNNCERCKPLFNNKPWTFGQA-----CDGCTCNNHASSCF-----YNAAKGVGVCQNCIHNTKGDECDECKSGFFRNTTFLISSPEACAECDCDTAGVLFGSHICDPLSGKCICKIFVEGDRCDTCKDGFFGLSGELIQGCDVCDCSTSGTVAGQQVCNKTSGQCLCKEGFTDRRCSTCKPGYYGFPVSAPSQCVECNCNPSGSV 465 N FN+ + + CG+PPE++C GV C+ CD P + + +TD T+W+S+ + + + G + + + F P I K + + ++ YY+ C +T+ +K NR + + Q L ++ P VA L+G +++++ AT++++ L F FN P V + +Y+AI D + C CNG +++C +F K C C+ NT G +CE+C P FN++PW A C C CN + C+ Y + G C NC NT G C+ C+ FFR + + EAC+ C C G L S CD G+C CK V GD+CD C+ GF L+ GC C C SG++ CN +G+C+CK+ C CKPG++ S P C C C SV Sbjct: 56 NAAFNVTVVATNTCGTPPEEYCVQTGVTGVTKSCHL-CDAGQPHLQHGAAFLTDYNNQADTTWWQSQTMLAGVQYPSSINLTLHLGKAFDITYVRLKFHTSRPESFAIYKRTREDGPWIPYQYYSGSCENTY-----SKANRGFI---RTGGDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQEWVTATDIRVTLNRLNTFGDEVFNDPKVL--KSYYYAISDFAVGGRCKCNGHASECMKNEFDKLVCNCKHNTYGVDCEKCLPFFNDRPWRRATAESASECLPCDCNGRSQECYFDPELYRSTGHGGHCTNCQDNTDGAHCERCRENFFR-----LGNNEACSSCHCSPVGSL--STQCDSY-GRCSCKPGVMGDKCDRCQPGFHSLTE---AGCRPCSCDPSGSI---DECNIETGRCVCKDNVEGFNCERCKPGFFNLESSNPRGCTPCFCFGHSSV 503 HSP 3 Score: 137.117 bits (344), Expect = 5.573e-32 Identity = 86/244 (35.25%), Postives = 117/244 (47.95%), Query Frame = 0 Query: 265 CQKNTEGNNCERCK------PLFNNKPWTFGQACDGCTC-NNHASSCFYNAAKGVGVCQNCIHNTKGDECDECKSGFFRNTTFLISSP-EACAECDCDTAGVLFGSHICDPLSGKCICKIFVEGDRCDTCKDGFFGL-SGELIQGCDVCDCSTSGTVAGQQVCNKTSGQCLCKEGFTDRRCSTCKPGYYGFPVSAPSQCVECNCNPSGSVNMTCDQSGQCFCRDFYFDRTCSSIRIGYFSANVW 499 C T G CE C PL N P C C C +N + N + G C CI+NT G CD CK GFF N L +P + C C+C+ G + C+P++G+C C V G C C GF+ L SG QGC+ CDC G+ GQ C+ +GQC C+ G T + C C+ ++GF P C C+C+P GS+++ C G+C CR+ + C YF W Sbjct: 795 CPTGTTGKRCELCDDGYFGDPLGRNGPVRL---CRLCQCSDNIDPNAVGNCNRLTGECLKCIYNTAGFYCDRCKDGFFGNP--LAPNPADKCKACNCNLYGTMKQQSSCNPVTGQCECLPHVTGQDCGACDPGFYNLQSG---QGCERCDCHALGSTNGQ--CDIRTGQCECQPGITGQHCERCEVNHFGF---GPEGCKPCDCHPEGSLSLQCKDDGRCECREGFVGNRCDQCEENYFYNRSW 1025 HSP 4 Score: 119.013 bits (297), Expect = 1.768e-26 Identity = 83/254 (32.68%), Postives = 114/254 (44.88%), Query Frame = 0 Query: 246 CYCNGMSNQCDDKDFGKCVCQKNTEGNNCERCKP-LFNNKPWTFGQACDGCTCNNHASSCFYNAAKGVGVCQNCIHNTKGDECDECKSGFFRNTTFLISSPEACAECDCDTAGVLFGSHICDPLSGKCI-CKIFVEGDRCDTCKDGFFG--LSGELIQGCDVCDCSTSGTVAGQQVCNKTSGQCLCKEGFTDRRCSTCKPGYYGFPVSAPSQCVECNCNPSGSVNMTCD-QSGQCFCRDFYFDRTCSSIRIGYF 494 C CNG S CD + G C C+ NT G +CE+C + + C C C +S K V VC NC T G C+ C G+F + C C C C+ L+G+C+ C G CD CKDGFFG L+ C C+C+ GT+ Q CN +GQC C T + C C PG+Y + + C C+C+ GS N CD ++GQC C+ + C + +F Sbjct: 724 CACNGHSETCD-PETGVCNCRDNTAGPHCEKCSDGYYGDSTAGTSSDCQPCPCPGGSSCAVVPKTKEV-VCTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCSDNIDPNAVGNCNRLTGECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACNCNLYGTMKQQSSCNPVTGQCECLPHVTGQDCGACDPGFYN--LQSGQGCERCDCHALGSTNGQCDIRTGQCECQPGITGQHCERCEVNHF 973 The following BLAST results are available for this feature:
BLAST of TCONS_00004794-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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