TCONS_00004700-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00004700-protein
Unique Name	TCONS_00004700-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	386

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00004700-protein ID=TCONS_00004700-protein|Name=TCONS_00004700-protein|organism=Clytia hemisphaerica|type=polypeptide|length=386bp
MEKKLDRMINESQELLERARTLNQIPGASKLERKINAELKCLMKFKKKPP
NSLENHLKSTNLTNLRAVLRAVENSPDVECVLSTFYYELDDIGDQLVVDA
VVTGGYKWIKVVARKPLAVHRIMIGEGQYGDKDIVRVARDYIAASDQNPI
NYESPSICFLFPKGLTQTVYDNLKITGVYTIGKVLPDPDYENLEAWNELQ
DETAMSDITKLLSDFTIRCTRVNLDITTLIVLTSNLTNGYCRYIFKEDIL
TKQAANEAANPALPELLKYLEGKELVCCQTAYNNFQEILKTVGGTMEKGR
AKELFDRVTLIPDDPAFYAMELDESASIKERSKIIFGTGETNQAITTTAN
TAFVRAAVNQGIKFSSYFHASRALTEQKQAKATPIE

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_002649	XLOC_002649	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00004700	TCONS_00004700	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR010733	DUF1308

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 5..25
IPR010733	Protein of unknown function DUF1308	PFAM	PF07000	DUF1308	coord: 31..375 e-value: 1.4E-86 score: 290.7

Blast

[Close]

BLAST of TCONS_00004700-protein vs. Swiss-Prot (Human)
Match: CG025 (UPF0415 protein C7orf25 OS=Homo sapiens GN=C7orf25 PE=1 SV=1)

HSP 1 Score: 296.204 bits (757), Expect = 2.107e-97
Identity = 168/399 (42.11%), Postives = 234/399 (58.65%), Query Frame = 0

Query:   12 SQELLERARTLNQ-----IPGASKLERKINAELKCLMKFKKKPPNSLENHLKSTNLTNLRAVLRAVENSPDVECVLSTFYYELDDIGDQ--LVVDAVVTGGYKWIKVVARKPLAVHRIMIGEGQYGDKDIVRVARDYIAASDQNPINYESPSICFLFPKGLTQTVYDNLKITGVYTIGKV-----LPDPDYENLEAWNELQDE------TAMSDITKLLSDFTIR-------CTRVNLDITTLIVLTSNLTNGYCRYIFKEDILTKQAANEAANPALPELLKYLEGKELVCCQTAYNNFQEILKTVGGTMEKGRAKELFDRVTLIPDDPAFYAMELDESASIKERSKIIFGTGETNQAITTTANTAFVRAAVNQGIKFSSYFHASRALTEQKQAKATPI 385
            ++EL++RA +L++     I G +KL  K+ AELK L K +       E+HL+STNLT+LRA++ + EN  +V  VL  F Y  D +G++  LVVD V  GG+ W+K + RK  A+H I +G GQYGDK I+  A D++ AS Q P+ Y +P I F F   ++  + + LK  G+   G +     L D   E   + +E  DE          D   +L+            C RVNLDITTLI   S L+ G C +IFKE +LT+QA  E     LP+L  +++ KEL  C++A  +FQ IL T+GG  E+ RA  L  R+ ++PD P+  A+ L  S+ I  RS  IFGTG+T +AIT TAN+ FVRAA NQG+KFS + H  RALTE K+A ATP+
Sbjct:   14 AKELIKRAESLSRSRKGGIEGGAKLCSKLKAELKFLQKVEAGKVAIKESHLQSTNLTHLRAIVESAENLEEVVSVLHVFGY-TDTLGEKQTLVVDVVANGGHTWVKAIGRKAEALHNIWLGRGQYGDKSIIEQAEDFLQASHQQPVQYSNPHIIFAFYNSVSSPMAEKLKEMGISVRGDIVAVNALLDHPEELQPSESESDDEGPELLQVTRVDRENILASVAFPTEIKVDVCKRVNLDITTLITYVSALSYGGCHFIFKEKVLTEQAEQERKEQVLPQLEAFMKDKELFACESAVKDFQSILDTLGGPGERERATVLIKRINVVPDQPSERALRLVASSKINSRSLTIFGTGDTLKAITMTANSGFVRAANNQGVKFSVFIHQPRALTESKEALATPL 411

The following BLAST results are available for this feature:

BLAST of TCONS_00004700-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00004700-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CG025	2.107e-97	42.11	UPF0415 protein C7orf25 OS=Homo sapiens GN=C7orf25...	[more]

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TCONS_00004700-protein (polypeptide) - C. hemisphaerica