Sequence
The following sequences are available for this feature:
polypeptide sequence
>TCONS_00004511-protein ID=TCONS_00004511-protein|Name=TCONS_00004511-protein|organism=Clytia hemisphaerica|type=polypeptide|length=157bp Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following
gene feature:
This polypeptide derives from the following
transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Biological Process
Term Definition
GO:0006886 intracellular protein transport
Vocabulary: Molecular Function
Term Definition
GO:0005515 protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category
Term Accession
Term Name
biological_process
GO:0006886 intracellular protein transport
molecular_function
GO:0005515 protein binding
InterPro
Analysis Name:
InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
M G D E E R A N N F Y M E A Q K K M E S T K G F M S R M F G A H S K I E D A C D L F Q R A G N A Y K M A K K W S A A G N A F C E L A K I Q L N Q L Q S K H E A A T Q Y V E A A N C Y R K S D H Q E A I N C L E L A V E I F T D M G R F A I A A K H H V T I A E I Y E S N L M N V D M A I T H F T Q A A D Y Y K G E E S S R 20 40 60 80 100 120 140 Score = 56.43 Score = 69.84 Score = 42.06 Expect = 1.6E-12 / Score = 46.5 Score = Expect = 1.7E-50 / Score = 171.9 Sequence PR00448 G3DSA:1.25.40.10 SSF48452 PF14938
IPR Term IPR Description Source Source Term Source Description Alignment
IPR000744 NSF attachment protein PRINTS PR00448 NSFATTACHMNT coord: 98..115 IPR011990 Tetratricopeptide-like helical domain GENE3D 1.25.40.10 coord: 4..157 IPR011990 Tetratricopeptide-like helical domain SUPERFAMILY 48452 TPR-like coord: 5..155 None No IPR available PFAM PF14938 SNAP coord: 6..156
Blast
BLAST of TCONS_00004511-protein vs. Swiss-Prot (Human)
Match:
SNAB (Beta-soluble NSF attachment protein OS=Homo sapiens GN=NAPB PE=1 SV=2)
HSP 1 Score: 194.897 bits (494), Expect = 6.930e-63
Identity = 87/155 (56.13%), Postives = 124/155 (80.00%), Query Frame = 0
Query: 2 GDEERANNFYMEAQKKMESTKGFMSRMFGAHSKIEDACDLFQRAGNAYKMAKKWSAAGNAFCELAKIQLNQLQSKHEAATQYVEAANCYRKSDHQEAINCLELAVEIFTDMGRFAIAAKHHVTIAEIYESNLMNVDMAITHFTQAADYYKGEESS 156
G E A EA+K+++++ F+ +FG +++IE+AC+++ RA N +KMAK WSAAGNAFC+ AK+ + QLQSKH++AT +V+A N Y+K+D QEAINCL A++I+TDMGRF IAAKHH+TIAEIYE+ L++++ AI H+ Q+ADYYKGEES+
Sbjct: 5 GKEREAVQLMAEAEKRVKASHSFLRGLFGGNTRIEEACEMYTRAANMFKMAKNWSAAGNAFCQAAKLHM-QLQSKHDSATSFVDAGNAYKKADPQEAINCLNAAIDIYTDMGRFTIAAKHHITIAEIYETELVDIEKAIAHYEQSADYYKGEESN 158
The following BLAST results are available for this feature:
BLAST of TCONS_00004511-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (
Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens) )
Total hits: 1
M G D E E R A N N F Y M E A Q K K M E S T K G F M S R M F G A H S K I E D A C D L F Q R A G N A Y K M A K K W S A A G N A F C E L A K I Q L N Q L Q S K H E A A T Q Y V E A A N C Y R K S D H Q E A I N C L E L A V E I F T D M G R F A I A A K H H V T I A E I Y E S N L M N V D M A I T H F T Q A A D Y Y K G E E S S R 20 40 60 80 100 120 140 Expect = 6.93e-63 / Id = 56.13 Sequence SNAB
Match Name E-value Identity Description
SNAB 6.930e-63 56.13 Beta-soluble NSF attachment protein OS=Homo sapien... [more]
back to top
