TCONS_00004511-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004511-protein
Unique NameTCONS_00004511-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length157

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004511-protein ID=TCONS_00004511-protein|Name=TCONS_00004511-protein|organism=Clytia hemisphaerica|type=polypeptide|length=157bp
MGDEERANNFYMEAQKKMESTKGFMSRMFGAHSKIEDACDLFQRAGNAYK
MAKKWSAAGNAFCELAKIQLNQLQSKHEAATQYVEAANCYRKSDHQEAIN
CLELAVEIFTDMGRFAIAAKHHVTIAEIYESNLMNVDMAITHFTQAADYY
KGEESSR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002537XLOC_002537Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004511TCONS_00004511Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000744NSF_attach
IPR011990TPR-like_helical_dom
Vocabulary: Biological Process
TermDefinition
GO:0006886intracellular protein transport
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006886 intracellular protein transport
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000744NSF attachment proteinPRINTSPR00448NSFATTACHMNTcoord: 98..115
score: 69.84
coord: 127..144
score: 42.06
coord: 34..53
score: 56.43
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 4..157
e-value: 1.6E-12
score: 46.5
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 5..155
NoneNo IPR availablePFAMPF14938SNAPcoord: 6..156
e-value: 1.7E-50
score: 171.9

Blast
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BLAST of TCONS_00004511-protein vs. Swiss-Prot (Human)
Match: SNAB (Beta-soluble NSF attachment protein OS=Homo sapiens GN=NAPB PE=1 SV=2)

HSP 1 Score: 194.897 bits (494), Expect = 6.930e-63
Identity = 87/155 (56.13%), Postives = 124/155 (80.00%), Query Frame = 0 
Query:    2 GDEERANNFYMEAQKKMESTKGFMSRMFGAHSKIEDACDLFQRAGNAYKMAKKWSAAGNAFCELAKIQLNQLQSKHEAATQYVEAANCYRKSDHQEAINCLELAVEIFTDMGRFAIAAKHHVTIAEIYESNLMNVDMAITHFTQAADYYKGEESS 156
            G E  A     EA+K+++++  F+  +FG +++IE+AC+++ RA N +KMAK WSAAGNAFC+ AK+ + QLQSKH++AT +V+A N Y+K+D QEAINCL  A++I+TDMGRF IAAKHH+TIAEIYE+ L++++ AI H+ Q+ADYYKGEES+
Sbjct:    5 GKEREAVQLMAEAEKRVKASHSFLRGLFGGNTRIEEACEMYTRAANMFKMAKNWSAAGNAFCQAAKLHM-QLQSKHDSATSFVDAGNAYKKADPQEAINCLNAAIDIYTDMGRFTIAAKHHITIAEIYETELVDIEKAIAHYEQSADYYKGEESN 158
The following BLAST results are available for this feature:
BLAST of TCONS_00004511-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SNAB6.930e-6356.13Beta-soluble NSF attachment protein OS=Homo sapien... [more]
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