TCONS_00004003-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004003-protein
Unique NameTCONS_00004003-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length715

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004003-protein ID=TCONS_00004003-protein|Name=TCONS_00004003-protein|organism=Clytia hemisphaerica|type=polypeptide|length=715bp
MGGKGGGGGDNVRVVVRCRPLNDKEKNVMKCTIAVKCDEARGSVTVQQSA
SRSSDPPKVFTFDRVFGPESKQTDVYNDAARAIVEGVLEGYNGTIFAYGQ
TGTGKTFTMEGVRSEPNLRGIIPNSFAHIFGFISKLDGETKFLVRVSYLE
IYNENVRDLLGKDQNATLEVKERPDVGVYVKDLSAYVVNNADDMDKTMSL
GNKNRSVGATNMNAESSRSHAIFTIILERSEKGPDGQQHLRMGKLHMVDL
AGSERQAKTGATGDRLKEANKINLSLSTLGNVISALVDGKSTHIPYRNSK
LTRLLQDSLGGNSKTVMIANMGPAGYNMDETISTLRYANRAKNIKNKAKI
NEDPKDALLRQFQSEIEKLKQQLQDGGGGGEDVSGSEEEDEEYTDENGEK
QVRKVKKKPARCLSPETVKKIKDQIDSERKALLEQKNLAEDEKSKVEREL
QKREKELNKTQDEQKKLQQKLKSVESKLIVGGVNLLEKDAEQQRLLDESA
KELEARHQREAELKKKLEEQEAEKIDIEEKYANLKEEAAGKTKKLKKVWT
MLMSAKSEMADIQEEHQRENEDLLESVRSASKEDKFLQLVMDNYIPKEYQ
EMIQQGMIWNEETGEWQLRYVAYTGNNMRKLPQSPEKDKEVVDALDLSSV
FLTYNPGIPQDGGSGKKSRPKTARAKSARPKTAKKKAGKSSSSTDVHDED
LFPMSKRSQTPLKLF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002252XLOC_002252Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004003TCONS_00004003Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001752Kinesin_motor_dom
IPR019821Kinesin_motor_CS
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003777microtubule motor activity
GO:0008017microtubule binding
Vocabulary: Biological Process
TermDefinition
GO:0007018microtubule-based movement
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007018 microtubule-based movement
molecular_function GO:0005524 ATP binding
molecular_function GO:0008017 microtubule binding
molecular_function GO:0003777 microtubule motor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 552..583
NoneNo IPR availableCOILSCoilCoilcoord: 500..544
NoneNo IPR availableCOILSCoilCoilcoord: 422..477
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 440..464
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 654..715
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 370..410
NoneNo IPR availableCDDcd01371KISc_KIF3coord: 10..344
e-value: 0.0
score: 613.699
IPR001752Kinesin motor domainPRINTSPR00380KINESINHEAVYcoord: 210..227
score: 61.71
coord: 90..111
score: 75.8
coord: 244..262
score: 61.1
coord: 294..315
score: 72.2
IPR001752Kinesin motor domainSMARTSM00129kinesin_4coord: 9..352
e-value: 2.5E-182
score: 621.7
IPR001752Kinesin motor domainGENE3D3.40.850.10coord: 6..358
e-value: 9.2E-140
score: 464.8
IPR001752Kinesin motor domainPFAMPF00225Kinesincoord: 17..344
e-value: 4.2E-119
score: 397.3
IPR001752Kinesin motor domainPROSITEPS50067KINESIN_MOTOR_2coord: 11..344
score: 129.196
IPR019821Kinesin motor domain, conserved sitePROSITEPS00411KINESIN_MOTOR_1coord: 243..254
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 11..374

Blast
[Close]
BLAST of TCONS_00004003-protein vs. Swiss-Prot (Human)
Match: KIF3A (Kinesin-like protein KIF3A OS=Homo sapiens GN=KIF3A PE=1 SV=4)

HSP 1 Score: 872.848 bits (2254), Expect = 0.000e+0
Identity = 452/684 (66.08%), Postives = 555/684 (81.14%), Query Frame = 0 
Query:   10 DNVRVVVRCRPLNDKEKNVMKCTIAVKCDEARGSVTVQQSASRSSDPPKVFTFDRVFGPESKQTDVYNDAARAIVEGVLEGYNGTIFAYGQTGTGKTFTMEGVRSEPNLRGIIPNSFAHIFGFISKLDGETKFLVRVSYLEIYNENVRDLLGKDQNATLEVKERPDVGVYVKDLSAYVVNNADDMDKTMSLGNKNRSVGATNMNAESSRSHAIFTIILERSEKGPDGQQHLRMGKLHMVDLAGSERQAKTGATGDRLKEANKINLSLSTLGNVISALVDGKSTHIPYRNSKLTRLLQDSLGGNSKTVMIANMGPAGYNMDETISTLRYANRAKNIKNKAKINEDPKDALLRQFQSEIEKLKQQLQDGGGGGEDVSGSE----EEDEEYTDENGEKQVRKVKKKPARCLSPETVKKIKDQIDSERKALLEQKNLAEDEKSKVERELQKREKELNKTQDEQKKLQQKLKSVESKLIVGGVNLLEKDAEQQRLLDESAKELEARHQREAELKKKLEEQEAEKIDIEEKYANLKEEAAGKTKKLKKVWTMLMSAKSEMADIQEEHQRENEDLLESVRSASKEDKFLQLVMDNYIPKEYQEMIQQGMIWNEETGEWQLRYVAYTGNNMRKLPQSPEKDKEVVDA--LDLSSVFLTYN-PGIPQDGGSGKKSRPKTARAKSARPKTAKKK 686
            DNV+VVVRCRPLN++EK+ M    AV  DE RG++TV ++ S S++PPK FTFD VFGPESKQ DVYN  AR I++ VLEGYNGTIFAYGQTGTGKTFTMEGVR+ P LRGIIPNSFAHIFG I+K +G+T+FLVRVSYLEIYNE VRDLLGKDQ   LEVKERPDVGVY+KDLSAYVVNNADDMD+ M+LG+KNRSVGATNMN  SSRSHAIFTI +E SEKG DG  H+RMGKLH+VDLAGSERQAKTGATG RLKEA KINLSLSTLGNVISALVDGKSTH+PYRNSKLTRLLQDSLGGNSKT+M AN+GPA YN DETISTLRYANRAKNIKNKA+INEDPKDALLRQFQ EIE+LK++L++    GE++SGS+    EED++   E GE   ++ K++  + +SP+ + +++ +ID ERKAL  + ++ E+E++K   EL+KREK+L K Q E + L +KL ++E K+IVGGV+LL K  EQ++LL+ES  ELE R +R  +L+++LEE+E E++DIEEKY +L+EEA GKTKKLKKVWTMLM+AKSEMAD+Q+EHQRE E LLE++R  S+E +   L++DN+IP++YQEMI+  + WNE+ GEWQL+ VAYTGNNMRK  Q+P  DK+  D   +DLS V+L Y    + Q     K  RP+T++ K ARPKT ++K
Sbjct:   13 DNVKVVVRCRPLNEREKS-MCYKQAVSVDEMRGTITVHKTDS-SNEPPKTFTFDTVFGPESKQLDVYNLTARPIIDSVLEGYNGTIFAYGQTGTGKTFTMEGVRAIPELRGIIPNSFAHIFGHIAKAEGDTRFLVRVSYLEIYNEEVRDLLGKDQTQRLEVKERPDVGVYIKDLSAYVVNNADDMDRIMTLGHKNRSVGATNMNEHSSRSHAIFTITIECSEKGIDGNMHVRMGKLHLVDLAGSERQAKTGATGQRLKEATKINLSLSTLGNVISALVDGKSTHVPYRNSKLTRLLQDSLGGNSKTMMCANIGPADYNYDETISTLRYANRAKNIKNKARINEDPKDALLRQFQKEIEELKKKLEE----GEEISGSDISGSEEDDDEEGEVGEDGEKRKKRRGKKKVSPDKMIEMQAKIDEERKALETKLDMEEEERNKARAELEKREKDLLKAQQEHQSLLEKLSALEKKVIVGGVDLLAKAEEQEKLLEESNMELEERRKRAEQLRRELEEKEQERLDIEEKYTSLQEEAQGKTKKLKKVWTMLMAAKSEMADLQQEHQREIEGLLENIRQLSRELRLQMLIIDNFIPRDYQEMIENYVHWNEDIGEWQLKCVAYTGNNMRK--QTPVPDKKEKDPFEVDLSHVYLAYTEESLRQ--SLMKLERPRTSKGK-ARPKTGRRK 685
The following BLAST results are available for this feature:
BLAST of TCONS_00004003-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KIF3A0.000e+066.08Kinesin-like protein KIF3A OS=Homo sapiens GN=KIF3... [more]
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