Growth factor receptor bound protein (polypeptide) - C. hemisphaerica

Overview
NameGrowth factor receptor bound protein
Unique NameTCONS_00003763-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length611

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00003763-protein ID=TCONS_00003763-protein|Name=Growth factor receptor bound protein|organism=Clytia hemisphaerica|type=polypeptide|length=611bp
MDATDLDAVLENISLLIEDMEENINETKKSRQKLLTKTQNTTLQTNNNDE
EPIREHTPPSPKSTAPTPPSRPRDIPPVIRHDFTHKSTSEMEPFETSHIA
SIDNAVHYDELQKAKEASGSKNNIIKHPLNDHRGRRLCCSAENSPILSRS
MISRQNIPSPREQRTNSITPRLVLQNIDKFDVTVQCPDGNLFKAGVFKAW
TSFQLAWKIAHVRGMAEKIALIIEEHISDLHIKRLIEDHEIIHKVTTNWA
PDSNNILVMSERISKYDLFNEPADYLPIEMFDTRSDFIEQPKNVRRSSLL
RSIMTADQTPDLQGWVFVKAFDKQKWKKRFLRIKDKIVYTCETDDENSEI
KAIYRCDECYFYDCLAEFQVAHKTPYPHCFCIIPKVVTSWHEIKCFCTTS
ERHLIGWMSGFRFAKYGQQLYTNFREAMVKEANLRRTNSARVSLLFRRSF
GDNNNTKDNKATVDFSGQNGRVISDPMEALKIQSEMAFEIPKQTKRSSGT
FPPSSIRQNVLDKKIWYHGKLDREQATKKLKKHGSKEGLFLVRESNSTHG
NLVLTVITKKGRVSHHQIFKNKNLYGIEHGPQFNSLELLIEAYHSGAVEG
ADFSLKKACPI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002098XLOC_002098Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00003763TCONS_00003763Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000980SH2
IPR001849PH_domain
IPR011993PH_dom-like
IPR015042BPS-dom
IPR029071Ubiquitin-rel_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
ZOOM
x 1
POSITION
0
50100150200250300350400450500550600Score = Score = 18.086Score = Score = Score = SequenceCoilmobidb-litecd00173PR00401SM00252G3DSA:3.30.505.10PF00017PS50001SSF55550SM00233PF00169G3DSA:2.30.29.30SSF50729PF08947SSF54236
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 3..37
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..77
NoneNo IPR availableCDDcd00173SH2coord: 516..593
e-value: 1.42624E-20
score: 85.9702
IPR000980SH2 domainPRINTSPR00401SH2DOMAINcoord: 516..530
score: 42.35
coord: 562..572
score: 30.98
coord: 537..547
score: 59.03
coord: 582..596
score: 33.17
IPR000980SH2 domainSMARTSM00252SH2_5coord: 514..599
e-value: 2.1E-23
score: 93.8
IPR000980SH2 domainGENE3D3.30.505.10coord: 504..611
e-value: 2.2E-23
score: 81.9
IPR000980SH2 domainPFAMPF00017SH2coord: 516..593
e-value: 3.0E-18
score: 65.6
IPR000980SH2 domainPROSITEPS50001SH2coord: 516..609
score: 18.086
IPR000980SH2 domainSUPERFAMILY55550SH2 domaincoord: 508..609
IPR001849Pleckstrin homology domainSMARTSM00233PH_updatecoord: 310..418
e-value: 1.4E-7
score: 41.2
IPR001849Pleckstrin homology domainPFAMPF00169PHcoord: 312..414
e-value: 8.4E-7
score: 29.4
IPR011993PH domain-likeGENE3D2.30.29.30coord: 301..419
e-value: 1.8E-9
score: 36.9
IPR011993PH domain-likeSUPERFAMILY50729PH domain-likecoord: 302..423
IPR015042BPS (Between PH and SH2) domainPFAMPF08947BPScoord: 463..487
e-value: 1.7E-5
score: 24.4
IPR029071Ubiquitin-related domainSUPERFAMILY54236Ubiquitin-likecoord: 176..269

Blast
The following BLAST results are available for this feature:
BLAST of Growth factor receptor bound protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
ZOOM
x 1
POSITION
0
MDATDLDAVLENISLLIEDMEENINETKKSRQKLLTKTQNTTLQTNNNDEEPIREHTPPSPKSTAPTPPSRPRDIPPVIRHDFTHKSTSEMEPFETSHIASIDNAVHYDELQKAKEASGSKNNIIKHPLNDHRGRRLCCSAENSPILSRSMISRQNIPSPREQRTNSITPRLVLQNIDKFDVTVQCPDGNLFKAGVFKAWTSFQLAWKIAHVRGMAEKIALIIEEHISDLHIKRLIEDHEIIHKVTTNWAPDSNNILVMSERISKYDLFNEPADYLPIEMFDTRSDFIEQPKNVRRSSLLRSIMTADQTPDLQGWVFVKAFDKQKWKKRFLRIKDKIVYTCETDDENSEIKAIYRCDECYFYDCLAEFQVAHKTPYPHCFCIIPKVVTSWHEIKCFCTTSERHLIGWMSGFRFAKYGQQLYTNFREAMVKEANLRRTNSARVSLLFRRSFGDNNNTKDNKATVDFSGQNGRVISDPMEALKIQSEMAFEIPKQTKRSSGTFPPSSIRQNVLDKKIWYHGKLDREQATKKLKKHGSKEGLFLVRESNSTHGNLVLTVITKKGRVSHHQIFKNKNLYGIEHGPQFNSLELLIEAYHSGAVEGADFSLKKACPI50100150200250300350400450500550600Expect = 1.52e-39 / Id = 26.78SequenceGRB10
Match NameE-valueIdentityDescription
GRB101.524e-3926.78Growth factor receptor-bound protein 10 OS=Homo sa... [more]
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