TCONS_00003128-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00003128-protein
Unique NameTCONS_00003128-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1119

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00003128-protein ID=TCONS_00003128-protein|Name=TCONS_00003128-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1119bp
MADDLVFPEDDLMGDFDTNLEDLLNIPQLVPVPPLDSMQHNMQRNYANMQ
HHMNNMGAAPQTNNSSYRPITQLMKQTQELASTLGSPLSSSLNQRMNYNN
IVNTSSMLNQQQHHQQHQNMPNNIQNRLIGNNMNYVNHTANQQKSSQYLV
VGGQRIPTQPQQALPQHQQSPTQHLSQSSSSPLHAQGSPIFDMTSPSSLQ
QQHQNSFKAMSPSSNIQQPVQKVITTNNQPKKAIVLTTPQQTQQVHHQPQ
LAQNIQQPKPKQTTPPQLISTGASNNPLQQNGVIIKTADQKLMFVTEVNG
KKVGYVLPNQKQPSSPNPSVTVTVSTLSATQSNLQQQQPVVQTNIQKPVQ
QAVIQNTQKPIQQAIVQNTQKLAQQTISQNIPKLIPQALSQNVPKAIPQT
IVQNTQKSVQQQQSVIQNSQQKEGLAPSLDSIKPSIQKDSKDNTIKPAVE
KTLKERLQGLRNNVNNANLRTQLNLNKEKNEKLISQLNNHNALPHVEQRI
VQVHTVTQQTNNPVSKIISDFDNTFNNDQSPPPTPPTPTSTLTKDNLAAL
ANNKPAENMSFLGDEEDGQDLDFSESDLTAIQEDSDEPMITSISVPKQNE
IEDVSMNNNTNNDDEDSDSLPLSLLKHEEPISIVRENNTEEESSGAKPAK
RSKKSDDSVPLSVVAASLKKDARQEAAPKPRKKRAGRKKKDPDEPTKPIL
AYQLFFREAQQRLKEENPMYKENFGELSRKIGKLWEELDPEKKKVHRQNY
QKEKAEYDIKLKEYKEKKALEEAQNEALSPSTSANQNSRDGLSTAPDDDD
EDAPLKKTSPSKKGAKKKTPATSRPKLTATTIATSSTLSPPLHNFNEESN
DSVIDQAADGTEVKRKRKYIKKTKTSATDSPSPPSTDTEGSESEEDDAIS
RIKELAAKAKKTLKKIEKQTSKGKGKGKVVKMEVETVSTNIQYDPSPKKV
EANAQPETMETDQPKHPEASTPVQEEMSPPRATVETPASTPTAPEVKGMT
AKNLKATTKEKVKVKEKASDKVNNNDTNKDYKTDDSSIPPLSSPPPKASF
KIPKKAHGENGQVAPQGPRLCVRESCPNPIKVTRERGAQYCSNDCLVLYC
REVFDAWVIDRQKEEALKT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001735XLOC_001735Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00003128TCONS_00003128Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009071HMG_box_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 899..922
NoneNo IPR availableCOILSCoilCoilcoord: 450..486
NoneNo IPR availableCOILSCoilCoilcoord: 402..422
NoneNo IPR availableCOILSCoilCoilcoord: 747..774
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 159..216
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 770..1067
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 737..758
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 238..275
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 417..443
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 580..701
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 517..543
NoneNo IPR availableCDDcd01390HMGB-UBF_HMG-boxcoord: 695..762
e-value: 2.81672E-13
score: 65.7269
IPR009071High mobility group box domainSMARTSM00398hmgende2coord: 694..766
e-value: 8.4E-12
score: 55.2
IPR009071High mobility group box domainGENE3D1.10.30.10coord: 678..766
e-value: 2.0E-16
score: 59.5
IPR009071High mobility group box domainPFAMPF00505HMG_boxcoord: 695..765
e-value: 1.9E-10
score: 40.9
IPR009071High mobility group box domainPROSITEPS50118HMG_BOX_2coord: 695..765
score: 16.064
IPR009071High mobility group box domainSUPERFAMILY47095HMG-boxcoord: 686..767

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003128-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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