TCONS_00003102-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00003102-protein
Unique NameTCONS_00003102-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length154

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00003102-protein ID=TCONS_00003102-protein|Name=TCONS_00003102-protein|organism=Clytia hemisphaerica|type=polypeptide|length=154bp
MNNGISSSSSRFTITKPFQKSQDSGTKEDVKLELLENQNTGSLDQIDLGF
DKNASPTGDDQHVLALYSEDIHLKGGRFQSFLQNVTAYTATIPPANDSEA
QPKQEVAKLGTLVGVYLPCIQNILGVILFIRLSWIVGTAGVLQSFSIVLI
CCCC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001722XLOC_001722Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00003102TCONS_00003102Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27

Blast
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BLAST of TCONS_00003102-protein vs. Swiss-Prot (Human)
Match: S12A6 (Solute carrier family 12 member 6 OS=Homo sapiens GN=SLC12A6 PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 7.966e-25
Identity = 59/153 (38.56%), Postives = 84/153 (54.90%), Query Frame = 0 
Query:   10 SRFTITKPFQKSQDSGTKEDVKLELLENQNTGSLDQIDLGFDKNASPTGDDQHVLALYSEDIHLKGGRFQSFLQNVTAYTATIPPANDSE--------AQPKQEVAKLGTLVGVYLPCIQNILGVILFIRLSWIVGTAGVLQSFSIVLICCCC 154
            S+ +IT    +  D G K+     L    N  + ++ D  FDKN          LAL+ E++  +  +  S L  +  YT     A + E         +   +  ++GT +GVYLPC+QNI GVILF+RL+W+VGTAGVLQ+F+IVLICCCC
Sbjct:   93 SQNSITGEHSQLLDDGHKKARNAYL----NNSNYEEGDEYFDKN----------LALFEEEMDTRP-KVSSLLNRMANYTNLTQGAKEHEEAENITEGKKKPTKTPQMGTFMGVYLPCLQNIFGVILFLRLTWVVGTAGVLQAFAIVLICCCC 230
The following BLAST results are available for this feature:
BLAST of TCONS_00003102-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S12A67.966e-2538.56Solute carrier family 12 member 6 OS=Homo sapiens ... [more]
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