TCONS_00002089-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00002089-protein
Unique Name	TCONS_00002089-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	389

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00002089-protein ID=TCONS_00002089-protein|Name=TCONS_00002089-protein|organism=Clytia hemisphaerica|type=polypeptide|length=389bp
MAASVQSSSELDLSSIGDGIDEEPLGDLTDEELFELVQKTMRANEILKIE
TKMFESHLKRVDPKDLTGQNAGSIQSVPDPVATKTFRKRSRSRGHSIDRN
LKLSAEQKCDIATRELEELRESIDKMKEVAEKKLDNFKAIMEEADIRHSE
VKKTQYEFKRDVVNGAVNPRNGRVIAEKLVRSVEDKLRSRDTLIEKLRLK
NSTLKVLKKKLQLQLKQKEEMGEVLHEVDFNQLKIENSQYLEKIDERNQD
LLRLKLMATNVLQILNTYKKKLSSLTMESDRLNSEITMRKDLFSKIEAEM
KLVDEEKSTAEEVNRKCKTQLQDFKVPEVMEYVHEKAELYELRKAVSSWE
RKVEITSMALKTHLKTWQKLKGRDQYLPEQTISSSPLTS

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_001094	XLOC_001094	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00002089	TCONS_00002089	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR025254	DUF4201

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 102..147
None	No IPR available	COILS	Coil	Coil	coord: 296..316
None	No IPR available	COILS	Coil	Coil	coord: 194..221
None	No IPR available	COILS	Coil	Coil	coord: 265..285
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
IPR025254	Domain of unknown function DUF4201	PFAM	PF13870	DUF4201	coord: 188..361 e-value: 2.2E-45 score: 154.4

Blast

[Close]

BLAST of TCONS_00002089-protein vs. Swiss-Prot (Human)
Match: CC113 (Coiled-coil domain-containing protein 113 OS=Homo sapiens GN=CCDC113 PE=1 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 3.722e-83
Identity = 145/341 (42.52%), Postives = 225/341 (65.98%), Query Frame = 0

Query:   32 ELFELVQKTMRANEILKIETKMFESHLKRVDPKDLTGQNAGSIQSVPDPVATKTFRKRSRSRGHSIDRNLKLSAEQKCDIATRELEELRESIDKMKEVAEKKLDNFKAIMEEADIRHSEVKKTQYEFKRDVVNGAVNPRNGRVIA-EKLVRSVEDKLRSRDTLIEKLRLKNSTLKVLKKKLQLQLKQKEEMGEVLHEVDFNQLKIENSQYLEKIDERNQDLLRLKLMATNVLQILNTYKKKLSSLTMESDRLNSEITMRKDLFSKIEAEMKLVDEEKSTAEEVNRKCKTQLQDFKVPEVMEYVHEKAELYELRKAVSSWERKVEITSMALKTHLKTWQKLK 371
            +L  LV++    N  LK ET+MFE +  +++P+D        I+      A    R+RS+SR   +DR + L+A+QK ++  +E+ ++++ +   +  AE+ L + +AI+EEA+IR SEV +  +EF++D++  A++ + G ++A +K+++ +ED  R RD + EKLRLKN +LKV +KK+ LQL+QKEE+ E LH+VDF QLKIEN+Q+LE I+ RNQ+L +LKL + N LQ+LN YK KL         L+ EI +RK+L  KIE E   V+E+++ AE VN++ + QL +F+ P+VM YV EK    +L K++  WERKVEI  M+LK H K W ++K
Sbjct:   25 QLCGLVEELSYVNSALKTETEMFEKYYAKLEPRDQRPPRLSEIKISAADYAQFRGRRRSKSRT-GMDRGVGLTADQKLELVQKEVADMKDDLRHTRANAERDLQHHEAIIEEAEIRWSEVSREVHEFEKDILK-AISKKKGSILATQKVMKYIEDMNRRRDNMKEKLRLKNVSLKVQRKKMLLQLRQKEEVSEALHDVDFQQLKIENAQFLETIEARNQELTQLKLSSGNTLQVLNAYKSKLHKAMEIYLNLDKEILLRKELLEKIEKETLQVEEDRAKAEAVNKRLRKQLAEFRAPQVMTYVREKILNADLEKSIRMWERKVEIAEMSLKGHRKAWNRMK 363

The following BLAST results are available for this feature:

BLAST of TCONS_00002089-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00002089-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CC113	3.722e-83	42.52	Coiled-coil domain-containing protein 113 OS=Homo ...	[more]

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TCONS_00002089-protein (polypeptide) - C. hemisphaerica