TCONS_00001985-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00001985-protein
Unique NameTCONS_00001985-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length353

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00001985-protein ID=TCONS_00001985-protein|Name=TCONS_00001985-protein|organism=Clytia hemisphaerica|type=polypeptide|length=353bp
MSLGVPGNVKDNESFTTALHTEVTCENTSDVCYVTPDLAKKDGNENAVTG
DNVFNEIEANTLSMGPTMVGEVSDQKYLQQNIVTIDANSLVDYSTNPGIL
NNIEIINNNINAANENNVQQQPNNGTIYLLVSQSETQTVLQPIDQQQFPI
QQQPNTSAPQMLNIVNLDQNAPPPNSTDNIKNMSLQNESSSTSTSAPEAA
IVQVMNTEGVPVNINVNDIIATLNKNNLVKKDGNTIINLASFVAPNTLDN
AGDMKATEGHYVLNTNSDLLNTIPNWALQLRDCTLCGDTYTGYVFTESEM
DDILNLYKKETQSLFAIRQTPSAAKDESAETVRLMWKSQYIPYDGIPFVN
VGT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001023XLOC_001023Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00001985TCONS_00001985Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 169..195

Blast
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BLAST of TCONS_00001985-protein vs. Swiss-Prot (Human)
Match: CARTF (Calcium-responsive transcription factor OS=Homo sapiens GN=CARF PE=1 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 3.557e-25
Identity = 59/161 (36.65%), Postives = 85/161 (52.80%), Query Frame = 0 
Query:  197 PEAAIVQVMNTEGVPVNINVNDIIATLNKNNLVKKDGNTIIN-LASFVAPNTLDNAGDMKATEGHY---VLNTNSDLLNTIPNWALQLRDCTLCGDTYTGYVFTESEMDDILNLYKKETQSLFAIRQTPSAAKDESAETVRLMWKSQYIPYDGIPFVNVGT 353
            P+  +V V +   VP     N  + T+  + L     N I++   SF  P         K+  G     +L     L +  P WA +LR C   GD+Y GY  +E+E++ +L  +K++TQS++  RQ+PS AK       RLMWKSQY+PYDGIPFVN G+
Sbjct:  131 PQGQLVDVNSPRDVPEEKPSNRNLPTVRVDTLADNTSNYILHPQTSFPLPK--------KSVTGMLEEPLLGPLQPLSSNTPIWACRLRSCEKIGDSYRGYCVSETELESVLTFHKQQTQSVWGTRQSPSPAKP----ATRLMWKSQYVPYDGIPFVNAGS 279
The following BLAST results are available for this feature:
BLAST of TCONS_00001985-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CARTF3.557e-2536.65Calcium-responsive transcription factor OS=Homo sa... [more]
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