TCONS_00001970-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00001970-protein
Unique Name	TCONS_00001970-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	721

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00001970-protein ID=TCONS_00001970-protein|Name=TCONS_00001970-protein|organism=Clytia hemisphaerica|type=polypeptide|length=721bp
MSNNWETVVNKKKSHVTKADVRRVKKKFVEGEVPKVEKKDPLQLEKTAYE
AGFRNDDDSDKENYPSRIPFEQNEQKQSPRNVTRRKDKPKPKPAQTVNLG
EFIKKVDIDGLKLTIQSIQEKFNNHPLIWLKEVAAWLKSQIKGPAEKTDL
AFLKHETDFPVSELDKAVHKLLEDLMKKCDKKNLATFYISLIAGMVTDIQ
QGNSTLADRIMIQLLCQLEPTVIKENCNEIVAAKSKTAETYIAVMWALGQ
PVGTLENRLSVWWSSMFAVLDKKRHAVAAVHYLKEILSELEDKPIQKPML
DTESFLQLYNVIFGKSPLQHTSSLIDELKPFASLMKRMLLADKPCKERKN
IFMQLLDELKNMEEGRERNMICDVLSDCLVSNPDLLEWWSENILAYLRQS
SVLLKYIEETDVAERMRKGRRHKTSRPMVTAAQTMIGKMLKVKDRSRFDK
KPGFRECRKICNYFINEEMERRQQTSSVWKLLKYFFIFTTIFVAVDLYTN
KGYPGSRTNVFLKKYGLEERLMTGYNFADQKRMQAQSFITTNAPIYYAKV
SPYVDPVMEKTGYYTRITCEAIYKHSKPVRDFANTRIPPLLEKITYFLKR
QYDIISSYILGLYQTYAPIVQENVTQFYNWLQVSIPKAYKFILTNLMELK
KTIYNLNPAMFDKAAIVLNDAIDYVIKMVPIVVERCMATLNLVLEYIRTY
FAQGQGWMQQQFGSSKEAKKT

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_001015	XLOC_001015	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00001970	TCONS_00001970	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR019308	TMEM214

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019308	Transmembrane protein 214	PFAM	PF10151	TMEM214	coord: 2..596 e-value: 3.5E-76 score: 257.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..95

Blast

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BLAST of TCONS_00001970-protein vs. Swiss-Prot (Human)
Match: TM214 (Transmembrane protein 214 OS=Homo sapiens GN=TMEM214 PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 8.169e-18
Identity = 112/548 (20.44%), Postives = 224/548 (40.88%), Query Frame = 0

Query:   42 LQLEKTAYEAGFRN--DDDSDKENYPSRIPFEQNEQKQSPRNVTRRKDKPKPKPAQTVNLGEFIKKVDIDGLKLTIQSIQEKFNNHPLIWLKEVAAWLKSQIKGPAEKTDLAFLKHETDFPVSELDKAVHKLLEDLMKKCDKKNLATFYISLIAGMVTDIQQ--GNSTLADRIMIQLLCQLEPTVIKENCN---EIVAAKSKTAETYIAVMWALGQP-VGTLENRLSVWWSSMFAVLDKKRHAVAAVHYLKEILSELEDKPIQKPMLDTESFLQLYNVIFGKSPLQH-TSSLIDELKPFASLMKRMLLADKPCKERKNIFMQLLDELKNMEEGRERNMICDVLSDCLVSNPDLLEWWSENILAYLRQSSVLLKYIEETDVAERMRKGRRHKTSRPMVTAAQTMIGKMLKVKDRSRFDKKPGFRECRKICNYFINEEMERRQQTSSVW-KLLKYFFIFTTIFVAVDLYTNKGYPGSRTNVFLKKYGL----EERLMTGYNFADQKRMQAQSFITTNAPIYYAKVSPYVDPVMEKTGYYTRITCEAIYKH 575
            +Q   T YE GF N     + ++  P  +  ++   K+ P+ V    ++ + K  +  +L E +K +D+  L+  +   Q  F+ +P IWLK++A++L  +++ P  +  L+  +H  D+P S + + +  ++  L+ K    +L  F+   +  M+ ++ +  G S    RI IQ + Q +P +   N     E++ +        + +MWALGQ     L   L VW   M  VL  K  +  A+ YL  +L    +      M+  + F  L +  F   P    T SL ++L      +K +    KP       F   L           +  +   L++CL  +P     W +          +  K++ ++ +          +  + +  + Q  I + LK+ ++    K     +    C+      +++ Q     W +LL    +F   F+  DL ++  +  S T   L+  G     ++     Y+++    +Q  S++    P++ + +   V P ++    +T  T   +  H
Sbjct:   53 IQTTSTLYERGFENIMKRQNKEQVPPPAVEPKKPGNKKQPKKVATPPNQNQ-KQGRFRSLEEALKALDVADLQKELDKSQSVFSGNPSIWLKDLASYLNYKLQAPLSEPTLS--QHTHDYPYSLVSRELRGIIRGLLAKA-AGSLELFFDHCLFTMLQELDKTPGESLHGYRICIQAILQDKPKIATANLGKFLELLRSHQSRPAKCLTIMWALGQAGFANLTEGLKVWLGIMLPVLGIKSLSPFAITYLDRLLLMHPNLTKGFGMIGPKDFFPLLD--FAYMPNNSLTPSLQEQLCQLYPRLKVLAFGAKPDSTLHTYFPSFLSRATPSCPPEMKKELLSSLTECLTVDPLSASVWRQ----------LYPKHLSQSSLLLEHLLSSWEQIPKKVQKSLQETI-QSLKLTNQELLRKGSSNNQDVVTCDMACKGLLQQVQGPRLPWTRLLLLLLVFAVGFLCHDLRSHSSFQASLTGRLLRSSGFLPASQQACAKLYSYS----LQGYSWLGETLPLWGSHLLTVVRPSLQLAWAHTNATVSFLSAH 579

The following BLAST results are available for this feature:

BLAST of TCONS_00001970-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00001970-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
TM214	8.169e-18	20.44	Transmembrane protein 214 OS=Homo sapiens GN=TMEM2...	[more]

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TCONS_00001970-protein (polypeptide) - C. hemisphaerica