TCONS_00001846-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00001846-protein
Unique NameTCONS_00001846-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length459

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00001846-protein ID=TCONS_00001846-protein|Name=TCONS_00001846-protein|organism=Clytia hemisphaerica|type=polypeptide|length=459bp
FFPNVSTNDVWKKTFSLYFISTHRNIQRTALLRTRQREDCAMRERLLSLE
QSFILVPLLLMIPPVTPFDIVNEVQPSGNTDIGNLTLQQLCQFILHYNES
MCNCQILEEICLIYNYTDHWRSKEKVIYKFEDCDEITQATLVISMSIFGT
FGNLLVVIITYHNWKQSSLCHKLIGGLGICDLAFALMDLIQTVPLLWTCS
AFYGEIMCKFFAFANNTVAMIGLGFILIVAIERYVGICYPFTRGLSTKAV
LLMIIANVLLGVVLNIPLAIIYKVDEFNRCREFWSSRLRAKVYSWLMLML
SFVLPITAIALMYYRIIYTMRRSMKQYRNVSIKDKPTMRRNKEQQRVMFI
LIAILIAFFLLVAPDKFIWALKDQGFLENLTNQMLNILNLCARIPFSFHV
VINPLIYSVIDRKFRESLKNLLSCRDYHRSEPGGKNKRDSVNVTGKDGSM
NSDEKDCAV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000974XLOC_000974Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00001846TCONS_00001846Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000276GPCR_Rhodpsn
IPR017452GPCR_Rhodpsn_7TM
Vocabulary: Biological Process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
Vocabulary: Molecular Function
TermDefinition
GO:0004930G-protein coupled receptor activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007186 G-protein coupled receptor signaling pathway
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004930 G-protein coupled receptor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000276G protein-coupled receptor, rhodopsin-likePRINTSPR00237GPCRRHODOPSNcoord: 294..317
score: 24.66
coord: 215..237
score: 19.98
coord: 389..415
score: 24.22
coord: 137..161
score: 24.61
coord: 347..371
score: 20.67
IPR000276G protein-coupled receptor, rhodopsin-likePFAMPF000017tm_1coord: 152..407
e-value: 3.0E-24
score: 85.6
IPR000276G protein-coupled receptor, rhodopsin-likePROSITEPS00237G_PROTEIN_RECEP_F1_1coord: 221..237
NoneNo IPR availableGENE3D1.20.1070.10coord: 114..457
e-value: 4.8E-48
score: 163.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 431..459
NoneNo IPR availableSUPERFAMILY81321Family A G protein-coupled receptor-likecoord: 106..430
IPR017452GPCR, rhodopsin-like, 7TMPROSITEPS50262G_PROTEIN_RECEP_F1_2coord: 152..407
score: 28.978

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001846-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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