TCONS_00001593-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00001593-protein
Unique NameTCONS_00001593-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length792

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00001593-protein ID=TCONS_00001593-protein|Name=TCONS_00001593-protein|organism=Clytia hemisphaerica|type=polypeptide|length=792bp
MTVRKRANHTSNSESKDDNTKNEEATEKKTDFPKALTNGSASKVKENDNG
PLISIHLDISLYLRNLRESLTTLSKQDFAEVPLHIWKVLINRSKHQYKPL
KGFNLFWFYMIFSVALFTRFYTITLPKHVCWDETHFGKFANHYLNGTFFL
DVHPPLGKMLLALAGWMTGYNGEFSFEKPGMEYGEHRYVGMRAFCALLGC
FCVPLAYLIVWELTHNLPACILAASLILFDHGCITISQYILLDPILMFFI
MMSVYSLLKFYSWRDCPFSFDWWGWMFVTGYFLACTFSVKWVGLFVILFA
GMTTVQDLWDILGDLSNSLVDVGKHFIARAIGLILLPIFIYLFFFAVHFQ
ALPKSGPGDGFFSSSFQSTLEGNKLYKAVLPGELGYGAVVTLKNHKTAGT
LLHSHQHLYPKEHPPEQQQITGYSHKDSNNDWQINKAHHLITEDDRLEYV
RDGDEVRLMHVQTRRNLHSHPEKAPISTNLHQVSGYGQDGNGDANDIWLI
RITKNPGPDNRISTVKTIFQLVHRNTGCVLQETEKQLPKWGWEQKEMACN
PNKFVTIVGSEWNIESNTHKKVPQVSVELLSPSFFESVYESHVVMAKTNN
GFKPKEGEFTSQAWHWPINYRGQVFSGGDERVYLLGNPIVWWLICGTYFL
YVIVYVIQTLRWKRGYKFDATIYAEYTTMVSSCSWLFMGWALHYLPFYAM
GRVLYFHHYFPAYLFSAMFSGILLEHVSRTVSYMFSGERRKHVYYFCLAT
VLAIAISSFCMFRGLSYGMSGPMGNQPNQTMAAYRWLDTWDI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000832XLOC_000832Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00001593TCONS_00001593Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016093MIR_motif
IPR032421PMT_4TMC
IPR003342Glyco_trans_39/83
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0000030mannosyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006493protein O-linked glycosylation
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006493 protein O-linked glycosylation
cellular_component GO:0016020 membrane
molecular_function GO:0000030 mannosyltransferase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016093MIR motifSMARTSM00472mir_2coord: 447..503
e-value: 7.8E-13
score: 58.6
coord: 510..567
e-value: 0.9
score: 16.5
coord: 381..437
e-value: 1.3E-8
score: 44.6
IPR016093MIR motifPFAMPF02815MIRcoord: 401..553
e-value: 2.2E-26
score: 92.8
IPR016093MIR motifPROSITEPS50919MIRcoord: 447..503
score: 13.521
IPR016093MIR motifPROSITEPS50919MIRcoord: 381..437
score: 11.099
IPR016093MIR motifPROSITEPS50919MIRcoord: 509..567
score: 8.921
IPR016093MIR motifSUPERFAMILY82109MIR domaincoord: 384..554
IPR032421Protein O-mannosyl-transferase, C-terminal four TM domainPFAMPF16192PMT_4TMCcoord: 584..790
e-value: 6.2E-50
score: 169.5
IPR003342Glycosyl transferase family 39/83PFAMPF02366PMTcoord: 110..352
e-value: 1.4E-79
score: 267.0
NoneNo IPR availableGENE3D2.80.10.50coord: 381..577
e-value: 1.6E-47
score: 160.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..43

Blast
[Close]
BLAST of TCONS_00001593-protein vs. Swiss-Prot (Human)
Match: POMT2 (Protein O-mannosyl-transferase 2 OS=Homo sapiens GN=POMT2 PE=1 SV=2)

HSP 1 Score: 668.307 bits (1723), Expect = 0.000e+0
Identity = 344/698 (49.28%), Postives = 462/698 (66.19%), Query Frame = 0 
Query:  107 WFYMIFSVALF---TRFYTITLPKHVCWDETHFGKFANHYLNGTFFLDVHPPLGKMLLALAGWMTGYNGEFSFEKPGMEYGEHRYVGMRAFCALLGCFCVPLAYLIVWELTHNLPACILAASLILFDHGCITISQYILLDPILMFFIMMSVYSLLKFYSWRDCPFSFDWWGWMFVTGYFLACTFSVKWVGLFVILFAGMTTVQDLWDILGDLSNSLVDVGKHFIARAIGLILLPIFIYLFFFAVHFQALPKSGPGDGFFSSSFQSTLEGNKLYKAVLPGELGYGAVVTLKNHKTAGTLLHSHQHLYPKEHPPEQQQITGYSHKDSNNDWQINKAHHLITEDDRL------EYVRDGDEVRLMHVQTRRNLHSHPEKAPISTNLHQVSGYGQDGNGDANDIWLIRITKNPGPDNRISTVKTIFQLVHRNTGCVLQETEKQLPKWGWEQKEMACNPNKFVTIVGSEWNIESNTHKKVPQVSVELLSPSFFESVYESHVVMAKTNNGFKPKEGEFTSQAWHWPINYRGQVFSG---GDERVYLLGNPIVWWLICGTYFLYVIVYVIQTLRWKRGYKFDATIYAEYTTMVSSCSWLFMGWALHYLPFYAMGRVLYFHHYFPAYLFSAMFSGILLEHVSRTVSY-MFSGERRKHVYYFCLATVLAIAISSFCMFRGLSYGMSGPMGNQPNQTMAAYRWLDTWD 791
            W+ ++  V L    TRF+ +  P H+CWDETHFGK  ++Y+N TFF DVHPPLGKML+ LAG+++GY+G F F+KPG +Y  H Y+GMR FCA LG + VP AYL V +L+ +L A +L A+L+ FD GC+T+SQYILLDPILMFFIM ++ S++K+ S  D PFS  WW W+ +TG  LA    VK+VGLF+IL  G+ T+ DLW + GDLS SLV VGKH  AR + LI+LP+ +Y   FAVHF  L KSGPGDGFFSS+FQ+ L GN L+ A +P  L YG+V+T+KN + A   LHSH+HLYP+     QQQ+T Y HKD NN W I K +   T  D L      E+VR GD +RL H +T RNLHSH  +AP++   +QV+GYG +G GD+ND W I +  N    NRI  +++  + +H  TGCVL  + K LPKWGWEQ E+ C P    T+  S WN+E + + K+P +S+++L PSF E + ESH+VM + N+G KPK+ EFTS+ WHWPINY+G  FSG    D RVYLLGNP+VWWL   +  LY++   I  +  +RG +  A +      ++     + +GW LHY PF+ MGRVLYFHHYFPA LFS+M +GIL + + R  ++ + S    + ++   + ++L     SF +F  L+YGM GP+   P   MA  RWLD+WD
Sbjct:   57 WWALLALVTLLSFATRFHRLDEPPHICWDETHFGKMGSYYINRTFFFDVHPPLGKMLIGLAGYLSGYDGTFLFQKPGDKYEHHSYMGMRGFCAFLGSWLVPFAYLTVLDLSKSLSAALLTAALLTFDTGCLTLSQYILLDPILMFFIMAAMLSMVKYNSCADRPFSAPWWFWLSLTGVSLAGALGVKFVGLFIILQVGLNTIADLWYLFGDLSLSLVTVGKHLTARVLCLIVLPLALYTATFAVHFMVLSKSGPGDGFFSSAFQARLSGNNLHNASIPEHLAYGSVITVKNLRMAIGYLHSHRHLYPEGIGARQQQVTTYLHKDYNNLWIIKKHN---TNSDPLDPSFPVEFVRHGDIIRLEHKETSRNLHSHYHEAPMTRKHYQVTGYGINGTGDSNDFWRIEVV-NRKFGNRIKVLRSRIRFIHLVTGCVLGSSGKVLPKWGWEQLEVTCTPYLKETL-NSIWNVEDHINPKLPNISLDVLQPSFPEILLESHMVMIRGNSGLKPKDNEFTSKPWHWPINYQGLRFSGVNDTDFRVYLLGNPVVWWLNLLSIALYLLSGSIIAVAMQRGARLPAEVAGLSQVLLRGGGQVLLGWTLHYFPFFLMGRVLYFHHYFPAMLFSSMLTGILWDTLLRLCAWGLASWPLARGIHVAGILSLLLGTAYSFYLFHPLAYGMVGPLAQDPQSPMAGLRWLDSWD 749
The following BLAST results are available for this feature:
BLAST of TCONS_00001593-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
POMT20.000e+049.28Protein O-mannosyl-transferase 2 OS=Homo sapiens G... [more]
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