TCONS_00001478-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00001478-protein
Unique NameTCONS_00001478-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length549

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00001478-protein ID=TCONS_00001478-protein|Name=TCONS_00001478-protein|organism=Clytia hemisphaerica|type=polypeptide|length=549bp
MSSTTSTKENITVIEPADEKPPNQQPSLNNGTEDQTKQNGGNFSRAFGNM
LRRSKRLMSGRRRSQDPNVIHENQTLKSTTANQNTSNISHDKENKEPVNH
ATKTNGTSDFVNGHDSVDAVREEQRSFEEPDSPGGRRPSQTFYGSEKQVL
RDGRKIKEIEVTGERPDESNTDMKKQKKLQRRKSIDKEELNVSCRALGKA
DHEGWMFKKAGGHGIVPVSWKKFWVVIKLGKIYCYKTSFNMQADYLFMVT
DYSVDNATEKKKNFAFVLKPNEEDKKGVIFACETEQECNDWMGTINKILS
GVHLNNEEDHSEVRDYEDHKRLNAIKPTFKEEHQNNGVRKHRPISIAFQS
QEDEETTGLPAGFGTRTSSMSQPRVRKMSAGTGAPSSVLSVGSMFHKLEE
KPKEDQDEEDDEDVELKDLLYKEVEVETEAPAKTPSPKPAPIRVVEPVAK
QVIQTKERENEKTASIDAETIIKEMEEKTKENEEPTPEPALAGAPVSVEP
EPVKKPEPVVLPVSVEPEPVEKPEPVEESKAPVAEPEASSDETEEAIEV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000752XLOC_000752Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00001478TCONS_00001478Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001849PH_domain
IPR011993PH_dom-like
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001849Pleckstrin homology domainSMARTSM00233PH_updatecoord: 200..302
e-value: 1.4E-13
score: 61.1
IPR001849Pleckstrin homology domainPFAMPF00169PHcoord: 201..299
e-value: 5.2E-13
score: 49.3
IPR001849Pleckstrin homology domainPROSITEPS50003PH_DOMAINcoord: 199..300
score: 12.098
IPR011993PH domain-likeGENE3D2.30.29.30coord: 147..313
e-value: 9.5E-17
score: 60.5
IPR011993PH domain-likeSUPERFAMILY50729PH domain-likecoord: 186..299
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 425..549
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 350..388
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..182

Blast
[Close]
BLAST of TCONS_00001478-protein vs. Swiss-Prot (Human)
Match: ICEF1 (Interactor protein for cytohesin exchange factors 1 OS=Homo sapiens GN=IPCEF1 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.331e-16
Identity = 42/111 (37.84%), Postives = 60/111 (54.05%), Query Frame = 0 
Query:  192 VSCRALGKADHEGWMFKKAGGHGIVPVSWKKFWVVIKLGKIYCYKTSFNMQADYLFMVTDYSVDNATEKKKNFAFVLKPNEEDKKGVIFACETEQECNDWMGTINKILSGV 302
            +SC+ LG AD +GW++KK      +   WKKFWV++K   +Y Y      +AD    + D++V+ A+E KK  AF  K +    K   FA E  QE N W+   NK+ S V
Sbjct:   34 ISCKDLGHADCQGWLYKKKEKGSFLSNKWKKFWVILKGSSLYWYSNQMAEKADGFVNLPDFTVERASECKKKHAF--KISHPQIKTFYFAAENVQEMNVWL---NKLGSAV 139
The following BLAST results are available for this feature:
BLAST of TCONS_00001478-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ICEF11.331e-1637.84Interactor protein for cytohesin exchange factors ... [more]
back to top