Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00001402-protein ID=TCONS_00001402-protein|Name=TCONS_00001402-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1221bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00001402-protein vs. Swiss-Prot (Human)
Match: HMCN1 (Hemicentin-1 OS=Homo sapiens GN=HMCN1 PE=1 SV=2) HSP 1 Score: 201.06 bits (510), Expect = 8.438e-52 Identity = 133/378 (35.19%), Postives = 161/378 (42.59%), Query Frame = 0 Query: 175 LDGDWSQWGPWDVCRRPCFHGDQFRRRTCTNPAPQKGGRGCPESSGHHRMCNPNSCKDLDLHSSCKREQGECLDESGRGRIQTMGKKLNHGKEKDCLEKCMDQLYYGSGCTFIKSTGYCYTHTKRVAGGNGDDGAFCWVFKKCKINGKWSKWGAWGECSVSCGPGGKQTRRRTCNNPIPNAGGLDCPKSDNDSQT---RNC-------------------------KTR--XNPIPNAGGLDCPKSDNDSQTRNCKTRICPTHGKWSAWGSWGKCSASCGGGKKTRTRTCTNPAPRHGGMDCGDSIPHILNCNLKSCPPTHGKWSEWGSWGKCSASCGAGQKTRTRTCTNPAPQNGGRDCTDIKNDIENQKCNTNTCP 522 + G +SQW W C C G Q R R C P P GG+ C S R C C +D S EC GRG N + + C + H R GN + C + + C ++G WS W WG CS SCG G QTR R CNNP P GG C ++ Q RNC +TR +P+P GG C SD Q+ C + CPTHG WS W WG CS +C GG+ R RTC NP P +GG CG I CN CP G W W SW +CSASCG G+KTR R C +P P GGR C + + +CN CP Sbjct: 4528 VHGGFSQWSAWRACSVTCGKGIQKRSRLCNQPLPANGGKPCQGSDLEMRNCQNKPCP-VDGSWSEWSLWEECTRSCGRG---------NQTRTRTCNNPSVQ-------------------HGGRPCEGNAVEIIMCNI-RPCPVHGAWSAWQPWGTCSESCG-KGTQTRARLCNNPPPAFGGSYCDGAETQMQVCNERNCPIHGKWATWASWSACSVSCGGGARQRTRGCSDPVPQYGGRKCEGSD--VQSDFCNSDPCPTHGNWSPWSGWGTCSRTCNGGQMRRYRTCDNPPPSNGGRACGGPDSQIQRCNTDMCP-VDGSWGSWHSWSQCSASCGGGEKTRKRLCDHPVPVKGGRPCPG--DTTQVTRCNVQACP 4869 HSP 2 Score: 161.77 bits (408), Expect = 1.005e-39 Identity = 83/206 (40.29%), Postives = 105/206 (50.97%), Query Frame = 0 Query: 317 CKINGKWSKWGAWGECSVSCGPGGKQTRRRTCNNPIPNAGGLDCPKSDNDSQTRNCKTRXNPIPNAGGLDCPKSDNDSQTRNCKTRICPTHGKWSAWGSWGKCSASCGGGKKTRTRTCTNPAPRHGGMDCGDSIPHILNCNLKSCPPTHGKWSEWGSWGKCSASCGAGQKTRTRTCTNPAPQNGGRDCTDIKNDIENQKCNTNTCP 522 +++G +S+W AW CSV+CG G Q R R CN P+P GG C SD + RNC+ + CP G WS W W +C+ SCG G +TRTRTC NP+ +HGG C + I+ CN++ C P HG WS W WG CS SCG G +TR R C NP P GG C + + Q CN CP Sbjct: 4526 VQVHGGFSQWSAWRACSVTCG-KGIQKRSRLCNQPLPANGGKPCQGSD-----------------------------LEMRNCQNKPCPVDGSWSEWSLWEECTRSCGRGNQTRTRTCNNPSVQHGGRPCEGNAVEIIMCNIRPC-PVHGAWSAWQPWGTCSESCGKGTQTRARLCNNPPPAFGGSYCDGAETQM--QVCNERNCP 4698 HSP 3 Score: 112.849 bits (281), Expect = 8.959e-25 Identity = 55/120 (45.83%), Postives = 68/120 (56.67%), Query Frame = 0 Query: 403 ICPTHGKWSAWGSWGKCSASCGGGKKTRTRTCTNPAPRHGGMDCGDSIPHILNCNLKSCPPTHGKWSEWGSWGKCSASCGAGQKTRTRTCTNPAPQNGGRDCTDIKNDIENQKCNTNTCP 522 I HG +S W +W CS +CG G + R+R C P P +GG C S + NC K C P G WSEW W +C+ SCG G +TRTRTC NP+ Q+GGR C N +E CN CP Sbjct: 4525 IVQVHGGFSQWSAWRACSVTCGKGIQKRSRLCNQPLPANGGKPCQGSDLEMRNCQNKPC-PVDGSWSEWSLWEECTRSCGRGNQTRTRTCNNPSVQHGGRPCEG--NAVEIIMCNIRPCP 4641 The following BLAST results are available for this feature:
BLAST of TCONS_00001402-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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