TCONS_00001246-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00001246-protein
Unique NameTCONS_00001246-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length226

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00001246-protein ID=TCONS_00001246-protein|Name=TCONS_00001246-protein|organism=Clytia hemisphaerica|type=polypeptide|length=226bp
MSWLLRGAMAVPTVLPTAKHTATVIFLHGLGDTGHGWLAGLDEIKLPYVK
YICPNAPINKVSLNFGMQMPSWFDIKSLDFKGEEDEPGLKKSTDIVFTLI
NEEMKSGISSDRIIVGGFSQGGSVAFHTLQTSEHKLAGCIGLSTWMSMHD
KFEKITKPVNKDTPVFQGHGNADPVVKYTYGQMTESVLKKYYTKTKFQTY
GGLGHSSSPQEMSDVQDFIEKCLPKI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000667XLOC_000667Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00001246TCONS_00001246Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029058AB_hydrolase
IPR003140PLipase/COase/thioEstase
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016787 hydrolase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029058Alpha/Beta hydrolase foldGENE3D3.40.50.1820coord: 6..225
e-value: 5.0E-27
score: 94.4
IPR029058Alpha/Beta hydrolase foldSUPERFAMILY53474alpha/beta-Hydrolasescoord: 16..224
IPR003140Phospholipase/carboxylesterase/thioesterasePFAMPF02230Abhydrolase_2coord: 15..222
e-value: 2.6E-68
score: 230.0

Blast
[Close]
BLAST of TCONS_00001246-protein vs. Swiss-Prot (Human)
Match: LYPA2 (Acyl-protein thioesterase 2 OS=Homo sapiens GN=LYPLA2 PE=1 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 7.615e-72
Identity = 102/216 (47.22%), Postives = 139/216 (64.35%), Query Frame = 0 
Query:   13 TVLPTAKHTATVIFLHGLGDTGHGWLAGLDEIKLPYVKYICPNAPINKVSLNFGMQMPSWFDIKSLDFKGEEDEPGLKKSTDIVFTLINEEMKSGISSDRIIVGGFSQGGSVAFHTLQTSEHKLAGCIGLSTWMSMHDKFEKITKPVNKDTPVFQGHGNADPVVKYTYGQMTESVLKKYYT--KTKFQTYGGLGHSSSPQEMSDVQDFIEKCLPKI 226
            TV    + TA VIFLHGLGDTGH W   L  I+LP+VKYICP+AP   V+LN  M MPSWFD+  L     EDE G+KK+ + +  LI  EMK+GI ++RI++GGFSQGG+++ +T  T  H LAG + LS W+ +H  F +      KD  + Q HG  DP+V   +G +T   L+   T  + +F+TY G+ HSS PQEM+ V++F+EK LP +
Sbjct:   16 TVSGAERETAAVIFLHGLGDTGHSWADALSTIRLPHVKYICPHAPRIPVTLNMKMVMPSWFDLMGLSPDAPEDEAGIKKAAENIKALIEHEMKNGIPANRIVLGGFSQGGALSLYTALTCPHPLAGIVALSCWLPLHRAFPQAANGSAKDLAILQCHGELDPMVPVRFGALTAEKLRSVVTPARVQFKTYPGVMHSSCPQEMAAVKEFLEKLLPPV 231
The following BLAST results are available for this feature:
BLAST of TCONS_00001246-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LYPA27.615e-7247.22Acyl-protein thioesterase 2 OS=Homo sapiens GN=LYP... [more]
back to top