TCONS_00001198-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00001198-protein
Unique NameTCONS_00001198-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length336

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00001198-protein ID=TCONS_00001198-protein|Name=TCONS_00001198-protein|organism=Clytia hemisphaerica|type=polypeptide|length=336bp
MQTVQRETSGFVAGRQIQIRVRMQETVCWSTLELHNAAFFKCDAIXCKKQ
FAGRRWNCTMPPSSNVTPLLLPRLPLATKETSYLYASMSAAMMHTISRGC
MAGTLKNYCACSEEGRPRDLPKNQIWGGCGDNLPYGYKFSKMFTDAGEQL
TETSLTGFSRVLMNLHNNEAGRWAVYEKSFIKCRCHGVSTNCPTKTCYRQ
LGRFHTVAKHLETLHQDAVHVKLQKDVPDAEEEGNVEMKLVETSPGFTKK
STKDLVYISDSPSYCERSIRTGSYGVAGRPCTKEGNIHTDCEAMCCQKGH
YSKREIVRTKCGCKLIWCCEVKCNICENEQNNHYCR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000650XLOC_000650Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00001198TCONS_00001198Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005817Wnt
Vocabulary: Molecular Function
TermDefinition
GO:0005102receptor binding
Vocabulary: Biological Process
TermDefinition
GO:0007275multicellular organism development
GO:0016055Wnt signaling pathway
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007275 multicellular organism development
biological_process GO:0016055 Wnt signaling pathway
cellular_component GO:0005576 extracellular region
molecular_function GO:0005102 receptor binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005817WntPRINTSPR01349WNTPROTEINcoord: 124..136
score: 55.17
coord: 254..265
score: 60.38
coord: 184..198
score: 56.61
coord: 79..93
score: 33.88
IPR005817WntSMARTSM00097wnt1_3coord: 16..336
e-value: 2.8E-68
score: 242.8
IPR005817WntPFAMPF00110wntcoord: 41..336
e-value: 3.1E-76
score: 256.7

Blast
[Close]
BLAST of TCONS_00001198-protein vs. Swiss-Prot (Human)
Match: WNT5A (Protein Wnt-5a OS=Homo sapiens GN=WNT5A PE=1 SV=2)

HSP 1 Score: 223.402 bits (568), Expect = 2.843e-70
Identity = 115/292 (39.38%), Postives = 165/292 (56.51%), Query Frame = 0 
Query:   47 CKKQFAGRRWNCTMPPSSNVTPLLLPRLPLATKETSYLYASMSAAMMHTISRGCMAGTLKNYCACSEEGRPRDLPKNQIWGGCGDNLPYGYKFSKMFTDAGEQLTETSLTGF--SRVLMNLHNNEAGRWAVYEKSFIKCRCHGVSTNCPTKTCYRQLGRFHTVAKHLETLHQDAVHVKLQKDVPDAEEEGNVEMKLVETSPGFTKKSTKDLVYISDSPSYCERSIRTGSYGVAGRPCTKEGNIHTDCEAMCCQKGHYSKREIVRTKCGCKLIWCCEVKCNICENEQNNHYCR 336
            C+ QF  RRWNC+   +++V   ++    + ++ET++ YA  +A +++ +SR C  G L   C CS   RP+DLP++ +WGGCGDN+ YGY+F+K F DA E+    +   +  +R+LMNLHNNEAGR  VY  + + C+CHGVS +C  KTC+ QL  F  V   L+  +  A  ++L           N   KLV+ +  F   +T+DLVYI  SP YC R+  TGS G  GR C K       CE MCC +G+   + +   +C CK  WCC VKC  C    +   C+
Sbjct:  104 CQYQFRHRRWNCSTVDNTSVFGRVMQ---IGSRETAFTYAVSAAGVVNAMSRACREGELST-CGCSRAARPKDLPRDWLWGGCGDNIDYGYRFAKEFVDARERERIHAKGSYESARILMNLHNNEAGRRTVYNLADVACKCHGVSGSCSLKTCWLQLADFRKVGDALKEKYDSAAAMRL-----------NSRGKLVQVNSRFNSPTTQDLVYIDPSPDYCVRNESTGSLGTQGRLCNKTSEGMDGCELMCCGRGYDQFKTVQTERCHCKFHWCCYVKCKKCTEIVDQFVCK 380
The following BLAST results are available for this feature:
BLAST of TCONS_00001198-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
WNT5A2.843e-7039.38Protein Wnt-5a OS=Homo sapiens GN=WNT5A PE=1 SV=2[more]
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