TCONS_00001195-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00001195-protein
Unique NameTCONS_00001195-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length681

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00001195-protein ID=TCONS_00001195-protein|Name=TCONS_00001195-protein|organism=Clytia hemisphaerica|type=polypeptide|length=681bp
MARYTSTYLPLLIIVLHFSFVKNFCIEFHCTARYKGSYKPTTAPPTGQCI
TQVDEVIYSMKHTVKSGGCKNTLCNEVNRERLKCSCREVTNCWWASWGAW
TGSITQGTCGKQHRRRAEKDRARYVERYGSCSGVKGQCNGSYNSEDRTMC
NCRKASSCPVAPWSSWTPAVGNGQCKDQTRHQDKKPSYTYVMKEQKKGEV
ACFGIDPDCRPPRITDTRTFCKCPTKECTERSWTSWNIDTWTGSCPNEKR
TKTYDFKIKYIEAYKSCNGVGKDCPPTKNEYRKKVIKCPAIKLSLNSIHL
DKSCNGVDSSCTSVCRIDCKKGYKLIGQNHVTCHGSGKWTGKLGYCKDSE
PPTITCPKLPIPTVNNKPGTNYSIISFPNATATDNSGFPVTITTSHPSPL
KVFVHHPVEVTYTATDAVGNTNKCKRKFIVKDHEAPVVTYCPKKHRIIKT
GLFPHRVFWPMPRFTDNVEADNELVFIPSVVNGTKFYQGKHSVDIKARDK
SSNTGNCTMTFELQMLKCPVDAPPKHGSATCNIKNNGKVEAFICTAACQK
GSWFLEGANIPKVYNLYVCSMDGAWQGASVFNFDNLVHSPMVPINRGDPM
WPDCSVGKSPNGVALDMQIFSGKCSDQASMEKLKRDFVATLKKDFIWGAA
FCSQQQQCDVENAVVXSFISLFQEDKEKHQQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000649XLOC_000649Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00001195TCONS_00001195Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
IPR000436Sushi_SCR_CCP_dom
IPR003410HYR_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 351..433
e-value: 2.5E-10
score: 40.4
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 434..509
e-value: 0.064
score: 13.3
NoneNo IPR availableGENE3D2.10.70.10coord: 510..580
e-value: 0.035
score: 14.2
NoneNo IPR availableGENE3D2.10.70.10coord: 283..349
e-value: 1.7E-8
score: 34.3
IPR000436Sushi/SCR/CCP domainPFAMPF00084Sushicoord: 308..343
e-value: 6.4E-5
score: 23.4
IPR000436Sushi/SCR/CCP domainPROSITEPS50923SUSHIcoord: 286..348
score: 8.696
IPR000436Sushi/SCR/CCP domainCDDcd00033CCPcoord: 313..347
e-value: 1.67028E-5
score: 42.0648
IPR000436Sushi/SCR/CCP domainSUPERFAMILY57535Complement control module/SCR domaincoord: 286..347
IPR003410HYR domainPFAMPF02494HYRcoord: 347..425
e-value: 1.1E-7
score: 31.9
coord: 431..510
e-value: 4.9E-9
score: 36.3
IPR003410HYR domainPROSITEPS50825HYRcoord: 433..515
score: 13.303
IPR003410HYR domainPROSITEPS50825HYRcoord: 347..432
score: 15.655

Blast
[Close]
BLAST of TCONS_00001195-protein vs. Swiss-Prot (Human)
Match: SVEP1 (Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 OS=Homo sapiens GN=SVEP1 PE=1 SV=3)

HSP 1 Score: 119.013 bits (297), Expect = 2.460e-27
Identity = 110/401 (27.43%), Postives = 166/401 (41.40%), Query Frame = 0 
Query:  288 CPAIKLSLNSIHLDKSCNGVDSSCTSVCRIDCKKGYKLIG-QNHVTCHGSGKWTG--KLGYCKDSEPPTITCPK-LPIPTVNNKPGTNYSIISFPNATATDNSGFPVTITTSHPS--PLKVFVHHPVEVTYTATDAVGNTNKCKRKFIVKDHEAPVVTYCPKKHRIIKTGLFPHRVFWPMPRFTDNVEADNELVFIPSVVNGTKFYQGKHSVDIKARDKSSNTGNCTMTFELQMLKCPVDAPPKHGSATCNIKNNGKVEAFICTAACQKGSWFLEGANIPKVYNLYVCSM-DGAWQGASVFNFDNLVHSPMVPINRGDPMWPDCSVGKSPNGVALDMQIF--SGKCSDQASMEKLKRDFVATLKKDFIWGAAFCSQQQ--QCDVENAVVXSFISLFQEDKE 677
            C   ++  + I    +C    +   ++C + C++G+ L G +  + C  SGKW    +   CKD E P I CPK +   T+  +   N   +++   TA DNSG  V++   HP+  P  +F    V + YTATD  GN   C     V D E PV+ +C +    ++     H   W  P+F+DN  A  ELV   S   G  F QG+  V   A D S N   C +   ++   C +   P +G   C   N G      CT  C +G  F EG+      + Y C+  DG W+                        WPDC+  +  N      ++F  + +C D   M+K    F  TL K      +FCS  +   C +E  +   +   +  D E
Sbjct:  498 CSTFQMPKDVIISPHNCGKQPAKFGTICYVSCRQGFILSGVKEMLRCTTSGKWNVGVQAAVCKDVEAPQINCPKDIEAKTLEQQDSAN---VTWQIPTAKDNSGEKVSVHV-HPAFTPPYLFPIGDVAIVYTATDLSGNQASCIFHIKVIDAEPPVIDWC-RSPPPVQVSEKVHAASWDEPQFSDNSGA--ELVITRSHTQGDLFPQGETIVQYTATDPSGNNRTCDIHIVIKGSPCEIPFTPVNGDFICTPDNTG----VNCTLTCLEGYDFTEGST-----DKYYCAYEDGVWKPTYTTE------------------WPDCAKKRFANHGFKSFEMFYKAARCDDTDLMKKFSEAFETTLGKMV---PSFCSDAEDIDCRLEENLTKKYCLEYNYDYE 861
The following BLAST results are available for this feature:
BLAST of TCONS_00001195-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SVEP12.460e-2727.43Sushi, von Willebrand factor type A, EGF and pentr... [more]
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