TCONS_00001155-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00001155-protein
Unique Name	TCONS_00001155-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	270

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00001155-protein ID=TCONS_00001155-protein|Name=TCONS_00001155-protein|organism=Clytia hemisphaerica|type=polypeptide|length=270bp
FYSNLHGLNHDLNISMIADRNEKKVAHKAIMDRIALQRRFLYLKRIFKVR
HMDFEFAIWQMIYLFVSPKKVFRNFSYHQETKRQWARDDPAFLVLFSGWL
FFASIIFSVALKLTFLEFAKLLFWVIFIDCIGFGLLVAGILSFIVNKYLR
FPGGERQKEEVEFGYAFDVHLNAFFPLLIILHIIQLLYTPLAHVSPFLGR
FFGNSLWLIAFIYYFYITFLGYSALPFLKGTVIILWPLIGVFIFYLISLF
HPSLTLSAMIINFYHHRVAG

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_000632	XLOC_000632	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00001155	TCONS_00001155	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR007881	UNC-50

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007881	UNC-50	PFAM	PF05216	UNC-50	coord: 42..255 e-value: 3.9E-79 score: 265.2

Blast

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BLAST of TCONS_00001155-protein vs. Swiss-Prot (Human)
Match: UNC50 (Protein unc-50 homolog OS=Homo sapiens GN=UNC50 PE=1 SV=2)

HSP 1 Score: 242.662 bits (618), Expect = 2.263e-80
Identity = 128/239 (53.56%), Postives = 167/239 (69.87%), Query Frame = 0

Query:   35 ALQRRFLYLKRIFKVRHMDFEFAIWQMIYLFVSPKKVFRNFSYHQETKRQWARDDPAFLVLFSGWLFFASIIFSVALKLTFLEFAKLLFWVIFIDCIGFGLLVAGILSFIVNKYLRFPGGERQKE--EVEFGYAFDVHLNAFFPLLIILHIIQLLYTPLAHV---SPFLGRFFGNSLWLIAFIYYFYITFLGYSALPFLKGTVIILWPLIGVFIFYLISLFHPSLTLSAMIINFYHHRV 268
            A  +R+ YL+R+F+ R MDFEFA WQM+YLF SP++V+RNF Y ++TK QWARDDPAFLVL S WL  ++I F   L + F E  KLL WV+ IDC+G GLL+A ++ FI NKYL     +RQ    +VE+GYAFDVHLNAF+PLL+ILH IQL +  + HV     F+G   GN+LWL+A  YY Y+TFLGYSALPFLK TVI+L+P   + + Y +SL       +  + +FY +RV
Sbjct:   27 AGAKRYKYLRRLFRFRQMDFEFAAWQMLYLFTSPQRVYRNFHYRKQTKDQWARDDPAFLVLLSIWLCVSTIGFGFVLDMGFFETIKLLLWVVLIDCVGVGLLIATLMWFISNKYLV----KRQSRDYDVEWGYAFDVHLNAFYPLLVILHFIQLFF--INHVILTDTFIGYLVGNTLWLVAVGYYIYVTFLGYSALPFLKNTVILLYPFAPLILLYGLSL-ALGWNFTHTLCSFYKYRV 258

The following BLAST results are available for this feature:

BLAST of TCONS_00001155-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00001155-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1

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Match Name	E-value	Identity	Description
UNC50	2.263e-80	53.56	Protein unc-50 homolog OS=Homo sapiens GN=UNC50 PE...	[more]

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TCONS_00001155-protein (polypeptide) - C. hemisphaerica

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