TCONS_00001155-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00001155-protein
Unique NameTCONS_00001155-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length270

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00001155-protein ID=TCONS_00001155-protein|Name=TCONS_00001155-protein|organism=Clytia hemisphaerica|type=polypeptide|length=270bp
FYSNLHGLNHDLNISMIADRNEKKVAHKAIMDRIALQRRFLYLKRIFKVR
HMDFEFAIWQMIYLFVSPKKVFRNFSYHQETKRQWARDDPAFLVLFSGWL
FFASIIFSVALKLTFLEFAKLLFWVIFIDCIGFGLLVAGILSFIVNKYLR
FPGGERQKEEVEFGYAFDVHLNAFFPLLIILHIIQLLYTPLAHVSPFLGR
FFGNSLWLIAFIYYFYITFLGYSALPFLKGTVIILWPLIGVFIFYLISLF
HPSLTLSAMIINFYHHRVAG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000632XLOC_000632Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00001155TCONS_00001155Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007881UNC-50
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007881UNC-50PFAMPF05216UNC-50coord: 42..255
e-value: 3.9E-79
score: 265.2

Blast
BLAST of TCONS_00001155-protein vs. Swiss-Prot (Human)
Match: UNC50 (Protein unc-50 homolog OS=Homo sapiens GN=UNC50 PE=1 SV=2)

HSP 1 Score: 242.662 bits (618), Expect = 2.263e-80
Identity = 128/239 (53.56%), Postives = 167/239 (69.87%), Query Frame = 0
Query:   35 ALQRRFLYLKRIFKVRHMDFEFAIWQMIYLFVSPKKVFRNFSYHQETKRQWARDDPAFLVLFSGWLFFASIIFSVALKLTFLEFAKLLFWVIFIDCIGFGLLVAGILSFIVNKYLRFPGGERQKE--EVEFGYAFDVHLNAFFPLLIILHIIQLLYTPLAHV---SPFLGRFFGNSLWLIAFIYYFYITFLGYSALPFLKGTVIILWPLIGVFIFYLISLFHPSLTLSAMIINFYHHRV 268
            A  +R+ YL+R+F+ R MDFEFA WQM+YLF SP++V+RNF Y ++TK QWARDDPAFLVL S WL  ++I F   L + F E  KLL WV+ IDC+G GLL+A ++ FI NKYL     +RQ    +VE+GYAFDVHLNAF+PLL+ILH IQL +  + HV     F+G   GN+LWL+A  YY Y+TFLGYSALPFLK TVI+L+P   + + Y +SL       +  + +FY +RV
Sbjct:   27 AGAKRYKYLRRLFRFRQMDFEFAAWQMLYLFTSPQRVYRNFHYRKQTKDQWARDDPAFLVLLSIWLCVSTIGFGFVLDMGFFETIKLLLWVVLIDCVGVGLLIATLMWFISNKYLV----KRQSRDYDVEWGYAFDVHLNAFYPLLVILHFIQLFF--INHVILTDTFIGYLVGNTLWLVAVGYYIYVTFLGYSALPFLKNTVILLYPFAPLILLYGLSL-ALGWNFTHTLCSFYKYRV 258          
The following BLAST results are available for this feature:
BLAST of TCONS_00001155-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UNC502.263e-8053.56Protein unc-50 homolog OS=Homo sapiens GN=UNC50 PE... [more]
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