Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00001077-protein ID=TCONS_00001077-protein|Name=TCONS_00001077-protein|organism=Clytia hemisphaerica|type=polypeptide|length=134bp MSIEECREFHRLWSAIQFIYCKPLGEHEITVEETFGESLNWAGITLIMLL RQEHRFEALDFCNHILRVQEIDSRQEVVAGVDLKRLIRRIKEYQTINKHI MAVLKRYLKSGDSSSVEQVRCFQPPIHQAFMSSV Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
Term | Definition |
IPR008081 | Cytoplasmic_FMR1-int |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR008081 | Cytoplasmic FMR1-interacting | PRINTS | PR01698 | CYTOFMRPINTP | coord: 8..24 score: 71.57 coord: 83..97 score: 42.22 |
IPR008081 | Cytoplasmic FMR1-interacting | PFAM | PF05994 | FragX_IP | coord: 1..104 e-value: 3.1E-40 score: 137.9 |
Blast
BLAST of TCONS_00001077-protein vs. Swiss-Prot (Human)
Match: CYFP1 (Cytoplasmic FMR1-interacting protein 1 OS=Homo sapiens GN=CYFIP1 PE=1 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 2.741e-50 Identity = 73/135 (54.07%), Postives = 102/135 (75.56%), Query Frame = 0 Query: 1 MSIEECREFHRLWSAIQFIYCKPLGEHEITVEETFGESLNWAGITLIMLLRQEHRFEALDFCNHILRVQEIDSRQEVVAGVDLKRLIRRIKEYQTINKHIMAVLKRYLKSGD--SSSVEQVRCFQPPIHQAFMSS 133
M ++EC EFHRLWSA+QF+YC P+G HE TVE+ FG+ L+WAG +I+LL Q+ RF LDFC H+L+VQ+ D + E++ V LK+++ RI+++Q +N I+ +L +YLKSGD + VE VRCFQPPIHQ+ SS
Sbjct: 1119 MHVDECVEFHRLWSAMQFVYCIPVGTHEFTVEQCFGDGLHWAGCMIIVLLGQQRRFAVLDFCYHLLKVQKHDGKDEIIKNVPLKKMVERIRKFQILNDEIITILDKYLKSGDGEGTPVEHVRCFQPPIHQSLASS 1253
The following BLAST results are available for this feature:
BLAST of TCONS_00001077-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 ( Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match Name | E-value | Identity | Description | |
CYFP1 | 2.741e-50 | 54.07 | Cytoplasmic FMR1-interacting protein 1 OS=Homo sap... | [more] |
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