TCONS_00001077-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00001077-protein
Unique NameTCONS_00001077-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length134

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00001077-protein ID=TCONS_00001077-protein|Name=TCONS_00001077-protein|organism=Clytia hemisphaerica|type=polypeptide|length=134bp
MSIEECREFHRLWSAIQFIYCKPLGEHEITVEETFGESLNWAGITLIMLL
RQEHRFEALDFCNHILRVQEIDSRQEVVAGVDLKRLIRRIKEYQTINKHI
MAVLKRYLKSGDSSSVEQVRCFQPPIHQAFMSSV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000609XLOC_000609Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00001077TCONS_00001077Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008081Cytoplasmic_FMR1-int
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008081Cytoplasmic FMR1-interactingPRINTSPR01698CYTOFMRPINTPcoord: 8..24
score: 71.57
coord: 83..97
score: 42.22
IPR008081Cytoplasmic FMR1-interactingPFAMPF05994FragX_IPcoord: 1..104
e-value: 3.1E-40
score: 137.9

Blast
[Close]
BLAST of TCONS_00001077-protein vs. Swiss-Prot (Human)
Match: CYFP1 (Cytoplasmic FMR1-interacting protein 1 OS=Homo sapiens GN=CYFIP1 PE=1 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 2.741e-50
Identity = 73/135 (54.07%), Postives = 102/135 (75.56%), Query Frame = 0 
Query:    1 MSIEECREFHRLWSAIQFIYCKPLGEHEITVEETFGESLNWAGITLIMLLRQEHRFEALDFCNHILRVQEIDSRQEVVAGVDLKRLIRRIKEYQTINKHIMAVLKRYLKSGD--SSSVEQVRCFQPPIHQAFMSS 133
            M ++EC EFHRLWSA+QF+YC P+G HE TVE+ FG+ L+WAG  +I+LL Q+ RF  LDFC H+L+VQ+ D + E++  V LK+++ RI+++Q +N  I+ +L +YLKSGD   + VE VRCFQPPIHQ+  SS
Sbjct: 1119 MHVDECVEFHRLWSAMQFVYCIPVGTHEFTVEQCFGDGLHWAGCMIIVLLGQQRRFAVLDFCYHLLKVQKHDGKDEIIKNVPLKKMVERIRKFQILNDEIITILDKYLKSGDGEGTPVEHVRCFQPPIHQSLASS 1253
The following BLAST results are available for this feature:
BLAST of TCONS_00001077-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CYFP12.741e-5054.07Cytoplasmic FMR1-interacting protein 1 OS=Homo sap... [more]
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